Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199105
Identifier: 87199105
GI number: 87199105
Start: 1127065
End: 1128174
Strand: Direct
Name: 87199105
Synonym: Saro_1083
Alternate gene names: NA
Gene position: 1127065-1128174 (Clockwise)
Preceding gene: 87199104
Following gene: 87199106
Centisome position: 31.65
GC content: 69.55
Gene sequence:
>1110_bases GTGAGCCTGCCGATCGAGGATTTCGACGTCGCCATCGTCGGGGCGGGCATGGCTGGCGCAAGCCTTGCCGCCGAATGCGC TACCCATGCTCGCGTGCTGCTGGTCGAGGCGGAGGATACGCCCGGTTACCACACGACGGGTCGTTCCGCCGCGTTCTGGG AAGAGACATATGGTGGACCGGGCGTCTTTCCGCTGACCATGGCTTCGGGCCGGTTCCTGCGCGAAGGTGGCTATCTTTCC CCGCGCGGGGCGCTGAACATCGGGCAGGCGGCGGACCGCGAGAAGCTGGAGGCATTCGTCGAGAAATTCCGCGCGCTCGG CGCGACGCTGCACATGCAGGATCGCGCTTCGCTCGAGCGTCGCGTGCCAGGCCTGCGCCCGGAATGGATCGTCGGCGCTT GGGAACCCGAGTGCGCCGACATCGACGTGGCCGGTTTGCACCAGCACTATCTCGCCGCATCGAAGCGCACCGGCACGGTG CTGCGGGTGCGGGCGCGCGTGGAGCGGGTGGAGCGCGAAGGCGCGGGCTGGCGCATCGCCTGGAATGGCGGCGAGGCGCG CGCGGCGATCCTTGCCAATGCCGCCGGGGCCTGGGCCGATGACTTCGCGCAGCTTGCCGGCGCCGCCGCGCTGGGCATCC AGCCGCTGCGCCGCACAATCGTCCAGCTGCGCACCGATCCCGCGCCCGCGGACGATTTGCCGCTGACGCTGGGCATCAAC GAGGACTTCTACTTCAAGCCGCAGGGCGGCCGCCTCTGGCTTTCCCCGCACGACGAGATTCCGGACGTGGCGCGCGATGC CGCGCCCGAGGAACTTGACGTCGCCATCGCCATCGACCGGTTCGAGCATGTCGTGGACTGGAAGATCGTCGCGATGGAGC GGCGCTGGGCAGGCCTGCGCTCGTTCTCGCCCGACCGGCTGCCGGTCTACGGCTTCGACCCCCGCGTTCCCGGACTATTC TGGTTCGCCGGGCAAGGCGGCTTCGGAATACAGACCGCGCCGGCGGCGGCAAGGCTCGGCGCGCAGCTTCTGCTGGGCCT GCCGCGCGATGGCCTGACGGCGGAGATCGACGCGGAAGTCTATGCGCCGGGTCGTTTTGTCATGGCCTGA
Upstream 100 bases:
>100_bases AGTTGCTCCGTGAGGCCGATCCGGTAAGGGACAAGGTCATGCACGCCATCGACGATTTTCTTGACCGCCTTGCCCCGCCG ACCGGGGAGGACGCACCCGC
Downstream 100 bases:
>100_bases ATGCATGATACTGTCATTTTGAGGAAACGAACGCGCTGGATTGAGTTTCAATCCCGGTTTCATTCTTCAAAAAGACCGAG AGGATGCGTTGATGGCACAC
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: Oxidoreductase; Glycine/D-Amino Acid Oxidase; Amino Acid Oxidase; FAD-Dependent Oxidoreductase; FAD Dependent Oxidoreductase Domain-Containing Protein; Glycine Oxidase; FAD Dependent Oxidoreductase Family; Oxidase; FAD-Dependent Glycerol-3-Phosphate Dehydrogenase Protein; Fad Dependent Oxidoreductase
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MSLPIEDFDVAIVGAGMAGASLAAECATHARVLLVEAEDTPGYHTTGRSAAFWEETYGGPGVFPLTMASGRFLREGGYLS PRGALNIGQAADREKLEAFVEKFRALGATLHMQDRASLERRVPGLRPEWIVGAWEPECADIDVAGLHQHYLAASKRTGTV LRVRARVERVEREGAGWRIAWNGGEARAAILANAAGAWADDFAQLAGAAALGIQPLRRTIVQLRTDPAPADDLPLTLGIN EDFYFKPQGGRLWLSPHDEIPDVARDAAPEELDVAIAIDRFEHVVDWKIVAMERRWAGLRSFSPDRLPVYGFDPRVPGLF WFAGQGGFGIQTAPAAARLGAQLLLGLPRDGLTAEIDAEVYAPGRFVMA
Sequences:
>Translated_369_residues MSLPIEDFDVAIVGAGMAGASLAAECATHARVLLVEAEDTPGYHTTGRSAAFWEETYGGPGVFPLTMASGRFLREGGYLS PRGALNIGQAADREKLEAFVEKFRALGATLHMQDRASLERRVPGLRPEWIVGAWEPECADIDVAGLHQHYLAASKRTGTV LRVRARVERVEREGAGWRIAWNGGEARAAILANAAGAWADDFAQLAGAAALGIQPLRRTIVQLRTDPAPADDLPLTLGIN EDFYFKPQGGRLWLSPHDEIPDVARDAAPEELDVAIAIDRFEHVVDWKIVAMERRWAGLRSFSPDRLPVYGFDPRVPGLF WFAGQGGFGIQTAPAAARLGAQLLLGLPRDGLTAEIDAEVYAPGRFVMA >Mature_368_residues SLPIEDFDVAIVGAGMAGASLAAECATHARVLLVEAEDTPGYHTTGRSAAFWEETYGGPGVFPLTMASGRFLREGGYLSP RGALNIGQAADREKLEAFVEKFRALGATLHMQDRASLERRVPGLRPEWIVGAWEPECADIDVAGLHQHYLAASKRTGTVL RVRARVERVEREGAGWRIAWNGGEARAAILANAAGAWADDFAQLAGAAALGIQPLRRTIVQLRTDPAPADDLPLTLGINE DFYFKPQGGRLWLSPHDEIPDVARDAAPEELDVAIAIDRFEHVVDWKIVAMERRWAGLRSFSPDRLPVYGFDPRVPGLFW FAGQGGFGIQTAPAAARLGAQLLLGLPRDGLTAEIDAEVYAPGRFVMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39971; Mature: 39840
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPIEDFDVAIVGAGMAGASLAAECATHARVLLVEAEDTPGYHTTGRSAAFWEETYGGP CCCCCCCCCEEEEECCCCCHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCHHHHHCCCC GVFPLTMASGRFLREGGYLSPRGALNIGQAADREKLEAFVEKFRALGATLHMQDRASLER CEEEEEECCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHH RVPGLRPEWIVGAWEPECADIDVAGLHQHYLAASKRTGTVLRVRARVERVEREGAGWRIA HCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCEEEE WNGGEARAAILANAAGAWADDFAQLAGAAALGIQPLRRTIVQLRTDPAPADDLPLTLGIN ECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC EDFYFKPQGGRLWLSPHDEIPDVARDAAPEELDVAIAIDRFEHVVDWKIVAMERRWAGLR CCEEEECCCCEEEECCCCCCCHHHHHCCCCCEEEEEEEHHHHHHHCEEEEEEEHHHHHHH SFSPDRLPVYGFDPRVPGLFWFAGQGGFGIQTAPAAARLGAQLLLGLPRDGLTAEIDAEV CCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHEEECCCCCCEEEECCEE YAPGRFVMA ECCCEEECC >Mature Secondary Structure SLPIEDFDVAIVGAGMAGASLAAECATHARVLLVEAEDTPGYHTTGRSAAFWEETYGGP CCCCCCCCEEEEECCCCCHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCHHHHHCCCC GVFPLTMASGRFLREGGYLSPRGALNIGQAADREKLEAFVEKFRALGATLHMQDRASLER CEEEEEECCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHH RVPGLRPEWIVGAWEPECADIDVAGLHQHYLAASKRTGTVLRVRARVERVEREGAGWRIA HCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCEEEE WNGGEARAAILANAAGAWADDFAQLAGAAALGIQPLRRTIVQLRTDPAPADDLPLTLGIN ECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC EDFYFKPQGGRLWLSPHDEIPDVARDAAPEELDVAIAIDRFEHVVDWKIVAMERRWAGLR CCEEEECCCCEEEECCCCCCCHHHHHCCCCCEEEEEEEHHHHHHHCEEEEEEEHHHHHHH SFSPDRLPVYGFDPRVPGLFWFAGQGGFGIQTAPAAARLGAQLLLGLPRDGLTAEIDAEV CCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHEEECCCCCCEEEECCEE YAPGRFVMA ECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA