Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199096
Identifier: 87199096
GI number: 87199096
Start: 1117707
End: 1118714
Strand: Direct
Name: 87199096
Synonym: Saro_1074
Alternate gene names: NA
Gene position: 1117707-1118714 (Clockwise)
Preceding gene: 87199095
Following gene: 87199104
Centisome position: 31.38
GC content: 66.07
Gene sequence:
>1008_bases GTGAAGCTTGCCTCCCTCCCGCAGGGACGGGATGGGCGGCTGATCGTCGTGTCCGACGACCTGGCCTGGTATGCCGATGC CGACCACATCGTCCCGACGATGCAGGGTCTGCTGGACGACTGGGACCGGCATTTCCCGTTGATCGAGGCCTTGGCGATCG AGCTTGCGCACGAAGCCATTCCGCTCAAGCGCTTTCACGAGCGCGAGGCCTGCGCACCCTTGCCGCGCGCCTTCCAGTGG GCAGACGGCAGCGCCTATGTGAATCACGTCGAACTGGTGCGGAAGGCGCGTGGGGCGGAGCTGCCTGAAAGCTTCTGGAC CGACCCGCTGATGTATCAGGGCGGCAGCGACGACATGCGCGGCGGGCGCGATCCCCTCGTACTGGCGGACGAAGCCTGGG GTGGGGACTTCGAGGCGGAAATCGTCGTCGTCACCGGCGACGTGCCCCAGGGCGTCAGCCCCGAAGAAGCGCTGAAGCAT ATCCGCCTTGTCGGTCTGGTCAACGACGTGTCGTTGCGCAATCTCATCCCCGGCGAACTGTCCAAGGGCTTCGGCTTCGT CCAGTCCAAGCCGGCCAGTCACTTTTCCCCGGTCTTCGTGACGCCGGAAACGCTCGGTGACGCATGGGCTGGCGGCAGAC TGTCGCAGACGCTGATGGTCGACCTCAACGGCGAGCCGTTCGGGCGCATCGAGGCTGCGGAAGAGTGCACGTTCGACTTC GGCGTGCTGATCGCGCATCTTGCGAAGACGCGCAGCATCGGGGCCGGTTCGATCATCGGATCGGGCACCGTGTCCAATCG CGATCCCGACGGTTCGCCAGGACGCCCGGTGGCCCAGGGCGGGCGCGGCTATGCCTGCATCGCCGAACAGCGCATGGTCG AGACGATCGCATCGGGCCAGCCGTCGACGGCCTTCCTGCGATGGGGCGATACAGTCCGGATCGAAATGCGCGACGACAAG GGCAAGAGCATCTTCGGCGCCATCGAGCAGACCGTCGTCCGCCCCTGA
Upstream 100 bases:
>100_bases AAAAGATCTTCTCCTCGATCACCGAGCGCGAGAAGGAAAAGCTGCGGTCGATCCTCGACAAGCTGCTGAAAGCCGCGCGC GCAATCGAAGGCGACGACAA
Downstream 100 bases:
>100_bases AGGTCGGCGCTAGCGCAGCGCCGACGCACATCTCGTTCCCGCGGTCGCCTCTCCCGTCAGACCGGCTTCTTGTTGACGAG GCTGTCGCTGATCGAGCATG
Product: fumarylacetoacetate (FAA) hydrolase
Products: NA
Alternate protein names: Fumarylacetoacetate Hydrolase Family Protein; 2-Keto-4-Pentenoate Hydratase; Aromatic Amino Acid Degradation Protein; Fumarylacetoacetase; Fumarylacetoacetate Hydrolase Family; Fumarylacetoacetate; Fumarylacetoacetase Protein; Hydrolase; 2-Oxopent-4-Enoate Hydratase; Potential Fumarylacetoacetate Hydrolase
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MKLASLPQGRDGRLIVVSDDLAWYADADHIVPTMQGLLDDWDRHFPLIEALAIELAHEAIPLKRFHEREACAPLPRAFQW ADGSAYVNHVELVRKARGAELPESFWTDPLMYQGGSDDMRGGRDPLVLADEAWGGDFEAEIVVVTGDVPQGVSPEEALKH IRLVGLVNDVSLRNLIPGELSKGFGFVQSKPASHFSPVFVTPETLGDAWAGGRLSQTLMVDLNGEPFGRIEAAEECTFDF GVLIAHLAKTRSIGAGSIIGSGTVSNRDPDGSPGRPVAQGGRGYACIAEQRMVETIASGQPSTAFLRWGDTVRIEMRDDK GKSIFGAIEQTVVRP
Sequences:
>Translated_335_residues MKLASLPQGRDGRLIVVSDDLAWYADADHIVPTMQGLLDDWDRHFPLIEALAIELAHEAIPLKRFHEREACAPLPRAFQW ADGSAYVNHVELVRKARGAELPESFWTDPLMYQGGSDDMRGGRDPLVLADEAWGGDFEAEIVVVTGDVPQGVSPEEALKH IRLVGLVNDVSLRNLIPGELSKGFGFVQSKPASHFSPVFVTPETLGDAWAGGRLSQTLMVDLNGEPFGRIEAAEECTFDF GVLIAHLAKTRSIGAGSIIGSGTVSNRDPDGSPGRPVAQGGRGYACIAEQRMVETIASGQPSTAFLRWGDTVRIEMRDDK GKSIFGAIEQTVVRP >Mature_335_residues MKLASLPQGRDGRLIVVSDDLAWYADADHIVPTMQGLLDDWDRHFPLIEALAIELAHEAIPLKRFHEREACAPLPRAFQW ADGSAYVNHVELVRKARGAELPESFWTDPLMYQGGSDDMRGGRDPLVLADEAWGGDFEAEIVVVTGDVPQGVSPEEALKH IRLVGLVNDVSLRNLIPGELSKGFGFVQSKPASHFSPVFVTPETLGDAWAGGRLSQTLMVDLNGEPFGRIEAAEECTFDF GVLIAHLAKTRSIGAGSIIGSGTVSNRDPDGSPGRPVAQGGRGYACIAEQRMVETIASGQPSTAFLRWGDTVRIEMRDDK GKSIFGAIEQTVVRP
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36323; Mature: 36323
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLASLPQGRDGRLIVVSDDLAWYADADHIVPTMQGLLDDWDRHFPLIEALAIELAHEAI CCCCCCCCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC PLKRFHEREACAPLPRAFQWADGSAYVNHVELVRKARGAELPESFWTDPLMYQGGSDDMR CHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCHHHCCCCEEECCCCCCCC GGRDPLVLADEAWGGDFEAEIVVVTGDVPQGVSPEEALKHIRLVGLVNDVSLRNLIPGEL CCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHEECCCHHHHCCCCHH SKGFGFVQSKPASHFSPVFVTPETLGDAWAGGRLSQTLMVDLNGEPFGRIEAAEECTFDF HHCCCCCCCCCCCCCCCEEECHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHCHHH GVLIAHLAKTRSIGAGSIIGSGTVSNRDPDGSPGRPVAQGGRGYACIAEQRMVETIASGQ HHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCHHCCCCCEEEHHHHHHHHHHHCCC PSTAFLRWGDTVRIEMRDDKGKSIFGAIEQTVVRP CCEEEEEECCEEEEEEECCCCCHHHHHHHHHHCCC >Mature Secondary Structure MKLASLPQGRDGRLIVVSDDLAWYADADHIVPTMQGLLDDWDRHFPLIEALAIELAHEAI CCCCCCCCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC PLKRFHEREACAPLPRAFQWADGSAYVNHVELVRKARGAELPESFWTDPLMYQGGSDDMR CHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCHHHCCCCEEECCCCCCCC GGRDPLVLADEAWGGDFEAEIVVVTGDVPQGVSPEEALKHIRLVGLVNDVSLRNLIPGEL CCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHEECCCHHHHCCCCHH SKGFGFVQSKPASHFSPVFVTPETLGDAWAGGRLSQTLMVDLNGEPFGRIEAAEECTFDF HHCCCCCCCCCCCCCCCEEECHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHCHHH GVLIAHLAKTRSIGAGSIIGSGTVSNRDPDGSPGRPVAQGGRGYACIAEQRMVETIASGQ HHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCHHCCCCCEEEHHHHHHHHHHHCCC PSTAFLRWGDTVRIEMRDDKGKSIFGAIEQTVVRP CCEEEEEECCEEEEEEECCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA