Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is aroH [H]

Identifier: 87199013

GI number: 87199013

Start: 1034325

End: 1035698

Strand: Direct

Name: aroH [H]

Synonym: Saro_0991

Alternate gene names: 87199013

Gene position: 1034325-1035698 (Clockwise)

Preceding gene: 87199012

Following gene: 87199021

Centisome position: 29.04

GC content: 65.43

Gene sequence:

>1374_bases
GTGGCAAAGAACTGGACTGCGGATTCGTGGCGCGGGCATGAGGGGCGGCATCTGCCGACCTATCCGGACGCCGAAAAGCT
GAACGAGGTCGAGACGACCCTGACGAGCTTTCCGCCGCTGGTTTTTGCCGGCGAGGCGCGCGCGCTCAAGGCCGATCTCG
CGCAAGTGGCTGCGGGCAAGGGTTTCCTGCTCCAGGGCGGGGACTGCGCCGAAAGCTTCGCCGAGTTCCATCCGAACAAC
ATTCGCGACACGTTCCGCGTGCTGCTGCAGATGGCGGTCGTGCTGACGTTCGCCAGCAAGCAGCCGGTGGTGAAGGTTGG
CCGCATGGCCGGCCAGTTCGCCAAGCCGCGTTCGTCGCCGGTGGAAAAGATCGGTGACGTCGAACTGCCGAGCTACCTTG
GCGACAATATCAACGGCATCGATTTCACCCCCGAGTCGCGGATTCCCGATCCCGAGCGCATGCTGCGCGCCTACAGCCAG
GCGGCGGCGACGCTGAACCTGCTGCGCGCTTTCGCGGGTGGCGGCTATGCGAACCTGCGCCAGGTCCACCAGTGGACGCT
CGACCACATCGGCAAGAGCCCCTGGGCGGCGAAGTTCAGCGAGATGGCCGACAAGATCGGCGAGTCTCTCGACTTCATGG
AAGCCTGTGGCGTCGATCCCAGCACCGTCCCGCAGCTTCAGGGCACGAGCTTCTACACTAGCCACGAAGCGCTGCTGCTG
CAGTACGAAGAAGCGATGACGCGCCAGGATTCGCTGACCGGCGAATGGTACGACACCAGCGCGCACATGCTCTGGATCGG
CGACCGTACTCGCTTCGAAGGATCGGCCCACGTCGAATACCTGCGCGGCGTCGGCAATCCCATCGGCATGAAGTGCGGTC
CTTCGCTGACGCCTGACGCCCTGCTGCGCATGCTGGATACGCTGAACCCCGGTCGCGAGGCCGGTCGCATCACGCTTATC
AGCCGCTTCGGGCACGACAAGGTCGAAGCCGGCCTGCCGCCTCTGGTGCGTGCCGTAACGCGCGAGGGGCACCCGGTAGT
GTGGTCGTGCGATCCGATGCACGGCAACGTGATCAAGGCCGACAATGGCTACAAGACGCGTCCGTTCGACCGCATCCTGA
CCGAGGTGAAGGGCTTCTTCGCGGTGCATCGCGCCGAGGGAACCCACGCTGGTGGCATCCACATCGAGATGACCGGCCGC
GACGTGACCGAGTGCACCGGCGGTGCGGTGGCGATCACCCAGGAAGGCCTGGCGGACCGTTACCACACCCATTGCGACCC
GCGCCTCAACGCGGCGCAGTCGATCGAGCTCGCTTTCCTGATGGCCGAAGCGCTCAACCAGGAACGCGCGGAGCGCAAGG
CCGAAGCGGCCTGA

Upstream 100 bases:

>100_bases
CAGGCCAACGCCTTCGCCGCATGATTGCGGCGCGGGCAAGGCTTCCTTTGCATTTCTTGCCCGACGGCCTTATGGCCCCG
CCTCTTGAAAGGAAGGAACA

Downstream 100 bases:

>100_bases
TCGCCCCGCCTGCTTGAAGAATTGACGGCCCGTTGCCTTAGGCGACGGGCCGTTTTTCCGTGGCGAGCCCTGCCAGGGCG
TGTTCGATGGCCAGCCGCGC

Product: 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase

Products: NA

Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MAKNWTADSWRGHEGRHLPTYPDAEKLNEVETTLTSFPPLVFAGEARALKADLAQVAAGKGFLLQGGDCAESFAEFHPNN
IRDTFRVLLQMAVVLTFASKQPVVKVGRMAGQFAKPRSSPVEKIGDVELPSYLGDNINGIDFTPESRIPDPERMLRAYSQ
AAATLNLLRAFAGGGYANLRQVHQWTLDHIGKSPWAAKFSEMADKIGESLDFMEACGVDPSTVPQLQGTSFYTSHEALLL
QYEEAMTRQDSLTGEWYDTSAHMLWIGDRTRFEGSAHVEYLRGVGNPIGMKCGPSLTPDALLRMLDTLNPGREAGRITLI
SRFGHDKVEAGLPPLVRAVTREGHPVVWSCDPMHGNVIKADNGYKTRPFDRILTEVKGFFAVHRAEGTHAGGIHIEMTGR
DVTECTGGAVAITQEGLADRYHTHCDPRLNAAQSIELAFLMAEALNQERAERKAEAA

Sequences:

>Translated_457_residues
MAKNWTADSWRGHEGRHLPTYPDAEKLNEVETTLTSFPPLVFAGEARALKADLAQVAAGKGFLLQGGDCAESFAEFHPNN
IRDTFRVLLQMAVVLTFASKQPVVKVGRMAGQFAKPRSSPVEKIGDVELPSYLGDNINGIDFTPESRIPDPERMLRAYSQ
AAATLNLLRAFAGGGYANLRQVHQWTLDHIGKSPWAAKFSEMADKIGESLDFMEACGVDPSTVPQLQGTSFYTSHEALLL
QYEEAMTRQDSLTGEWYDTSAHMLWIGDRTRFEGSAHVEYLRGVGNPIGMKCGPSLTPDALLRMLDTLNPGREAGRITLI
SRFGHDKVEAGLPPLVRAVTREGHPVVWSCDPMHGNVIKADNGYKTRPFDRILTEVKGFFAVHRAEGTHAGGIHIEMTGR
DVTECTGGAVAITQEGLADRYHTHCDPRLNAAQSIELAFLMAEALNQERAERKAEAA
>Mature_456_residues
AKNWTADSWRGHEGRHLPTYPDAEKLNEVETTLTSFPPLVFAGEARALKADLAQVAAGKGFLLQGGDCAESFAEFHPNNI
RDTFRVLLQMAVVLTFASKQPVVKVGRMAGQFAKPRSSPVEKIGDVELPSYLGDNINGIDFTPESRIPDPERMLRAYSQA
AATLNLLRAFAGGGYANLRQVHQWTLDHIGKSPWAAKFSEMADKIGESLDFMEACGVDPSTVPQLQGTSFYTSHEALLLQ
YEEAMTRQDSLTGEWYDTSAHMLWIGDRTRFEGSAHVEYLRGVGNPIGMKCGPSLTPDALLRMLDTLNPGREAGRITLIS
RFGHDKVEAGLPPLVRAVTREGHPVVWSCDPMHGNVIKADNGYKTRPFDRILTEVKGFFAVHRAEGTHAGGIHIEMTGRD
VTECTGGAVAITQEGLADRYHTHCDPRLNAAQSIELAFLMAEALNQERAERKAEAA

Specific function: Unknown

COG id: COG3200

COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II DAHP synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002480 [H]

Pfam domain/function: PF01474 DAHP_synth_2 [H]

EC number: =2.5.1.54 [H]

Molecular weight: Translated: 50171; Mature: 50040

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNWTADSWRGHEGRHLPTYPDAEKLNEVETTLTSFPPLVFAGEARALKADLAQVAAGK
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCC
GFLLQGGDCAESFAEFHPNNIRDTFRVLLQMAVVLTFASKQPVVKVGRMAGQFAKPRSSP
CEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCH
VEKIGDVELPSYLGDNINGIDFTPESRIPDPERMLRAYSQAAATLNLLRAFAGGGYANLR
HHHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QVHQWTLDHIGKSPWAAKFSEMADKIGESLDFMEACGVDPSTVPQLQGTSFYTSHEALLL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHH
QYEEAMTRQDSLTGEWYDTSAHMLWIGDRTRFEGSAHVEYLRGVGNPIGMKCGPSLTPDA
HHHHHHHHHHCCCCCEECCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHH
LLRMLDTLNPGREAGRITLISRFGHDKVEAGLPPLVRAVTREGHPVVWSCDPMHGNVIKA
HHHHHHHCCCCCCCCEEEEEECCCCCHHHCCCHHHHHHHHCCCCEEEEECCCCCCCEEEC
DNGYKTRPFDRILTEVKGFFAVHRAEGTHAGGIHIEMTGRDVTECTGGAVAITQEGLADR
CCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCEEEEECCCCHHHHCCCEEEEEHHHHHHH
YHTHCDPRLNAAQSIELAFLMAEALNQERAERKAEAA
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AKNWTADSWRGHEGRHLPTYPDAEKLNEVETTLTSFPPLVFAGEARALKADLAQVAAGK
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCC
GFLLQGGDCAESFAEFHPNNIRDTFRVLLQMAVVLTFASKQPVVKVGRMAGQFAKPRSSP
CEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCH
VEKIGDVELPSYLGDNINGIDFTPESRIPDPERMLRAYSQAAATLNLLRAFAGGGYANLR
HHHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QVHQWTLDHIGKSPWAAKFSEMADKIGESLDFMEACGVDPSTVPQLQGTSFYTSHEALLL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHH
QYEEAMTRQDSLTGEWYDTSAHMLWIGDRTRFEGSAHVEYLRGVGNPIGMKCGPSLTPDA
HHHHHHHHHHCCCCCEECCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHH
LLRMLDTLNPGREAGRITLISRFGHDKVEAGLPPLVRAVTREGHPVVWSCDPMHGNVIKA
HHHHHHHCCCCCCCCEEEEEECCCCCHHHCCCHHHHHHHHCCCCEEEEECCCCCCCEEEC
DNGYKTRPFDRILTEVKGFFAVHRAEGTHAGGIHIEMTGRDVTECTGGAVAITQEGLADR
CCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCEEEEECCCCHHHHCCCEEEEEHHHHHHH
YHTHCDPRLNAAQSIELAFLMAEALNQERAERKAEAA
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953; 8760910 [H]