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The map label for this gene is 87198979

Identifier: 87198979

GI number: 87198979

Start: 1004992

End: 1005348

Strand: Direct

Name: 87198979

Synonym: Saro_0957

Alternate gene names: NA

Gene position: 1004992-1005348 (Clockwise)

Preceding gene: 87198976

Following gene: 87198982

Centisome position: 28.22

GC content: 59.1

Gene sequence:

>357_bases
TTGCGACCCCGCGTTTGGCATGATGGCCGGATGGAAAAGGGTGGCTGGGTCTACATCATGGCAAACCGCTATCGTGGCGG
GATGTACGTTGGCGTTACCTCCGATCTCGTTCGGCGCGTGTGGCAGCATCGTGAAGGTGTAGGCTCAAGCCACGTGGACG
ACTTTGGAAAGACGAGGCTGGTCTACGCCGAGCGCCACGAAGAGATCGAACCCGCCATCGCCCGCGAGAAACTGGTCAAG
AAATGGCGCCGGGAATGGAAATTCGCGCTGATCGAAGCAGGCAATCCCGATTGGTTGGACCTTTGGGAGCAGTGGTATCC
GGCGGCGATTGCTTTGCGGGGCGTCGTTGAAAGGTAG

Upstream 100 bases:

>100_bases
AGCGCCGAAGGCGGAGCGGACGGCCGGAATGGGGTGGGAAGAGGACATATCCTCCACCAACCCCCCGTCGCCCCGTGCTT
GACACGGGGCTTGGCTTTTC

Downstream 100 bases:

>100_bases
CCAAGCCCCGTGTCAAGCACGGGGCGACGAACGTGTTGCGTTGCGGTGGCGTTCACGTCCGCTTCGGCGTCGTGCCCGGA
ACGTCCGTTTCCAGTGAAAG

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: Excinuclease ABC C Subunit Domain Protein; Endonuclease; Excinuclease ABC Subunit C Domain-Containing Protein; Excinuclease ABC C Subunit; Excinuclease ABC C Subunit Domain-Containing Protein; Excinuclease ABC C Subunit-Like Protein; Endonuclease Containing A URI Domain; Endo/Excinuclease Amino Terminal Domain-Containing Protein; Endo/Excinuclease Amino Terminal Domain Protein; GIY-YIG Catalytic Domain-Containing Protein; Endonuclease Protein; Crossover Junction Endodeoxyribonuclease RuvC; Excinuclease ABC; Endo/Excinuclease; GIY-YIG Endonuclease Domain-Containing Protein; Excinuclease ABCsubunit C Domain-Containing Protein; Excinuclease ABC C Subunit N-Terminal; GIY-YIG Catalytic Domain Protein

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MRPRVWHDGRMEKGGWVYIMANRYRGGMYVGVTSDLVRRVWQHREGVGSSHVDDFGKTRLVYAERHEEIEPAIAREKLVK
KWRREWKFALIEAGNPDWLDLWEQWYPAAIALRGVVER

Sequences:

>Translated_118_residues
MRPRVWHDGRMEKGGWVYIMANRYRGGMYVGVTSDLVRRVWQHREGVGSSHVDDFGKTRLVYAERHEEIEPAIAREKLVK
KWRREWKFALIEAGNPDWLDLWEQWYPAAIALRGVVER
>Mature_118_residues
MRPRVWHDGRMEKGGWVYIMANRYRGGMYVGVTSDLVRRVWQHREGVGSSHVDDFGKTRLVYAERHEEIEPAIAREKLVK
KWRREWKFALIEAGNPDWLDLWEQWYPAAIALRGVVER

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14065; Mature: 14065

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50164 UVRC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPRVWHDGRMEKGGWVYIMANRYRGGMYVGVTSDLVRRVWQHREGVGSSHVDDFGKTRL
CCCCCCCCCCCCCCCEEEEEEECCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCEEE
VYAERHEEIEPAIAREKLVKKWRREWKFALIEAGNPDWLDLWEQWYPAAIALRGVVER
EEECCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRPRVWHDGRMEKGGWVYIMANRYRGGMYVGVTSDLVRRVWQHREGVGSSHVDDFGKTRL
CCCCCCCCCCCCCCCEEEEEEECCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCEEE
VYAERHEEIEPAIAREKLVKKWRREWKFALIEAGNPDWLDLWEQWYPAAIALRGVVER
EEECCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA