Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198941
Identifier: 87198941
GI number: 87198941
Start: 971972
End: 972343
Strand: Direct
Name: 87198941
Synonym: Saro_0919
Alternate gene names: NA
Gene position: 971972-972343 (Clockwise)
Preceding gene: 87198940
Following gene: 87198942
Centisome position: 27.29
GC content: 66.13
Gene sequence:
>372_bases ATGCCAGACGGCGAAAGCCAGAACACGAAGGGGCAGCCGGGGATTACCCAGGCTGCCCTTTTCGGTTTGTGCCCACGTTG CGGCAGCAAGGGCCTGTGGGCGGGGCCAGCGGCGCTGGCCGAGCGTTGTCCCGCCTGTGGGCTGGAATTCGAACGTCATG AACCGCGCGGGCGGGGAATGTACCTCGTCGTCCTGCCGGTCACGATCCTGCTGGTGCTTGCGGCGCTCAAGCTCGACGAC TTGGTGCGCCTGCCGACATGGGCGCTGATTGCCCTTTGGGGCGTGGTCGTACCGACCGTGGTGATCGCCGCTCTGCGCTA TGCCAAGGCCGTGGCCCTGATGGCGCGACTCGAAAAGGAAGGCCTCCTGTGA
Upstream 100 bases:
>100_bases TCGAAGCGGCCGCATGGTACTGGCACTTCGTCGACGTGGTGTGGCTGTTCCTGTTCGTCGCCATCTACGTGTGGGGCGGC TGGGGCTACAAGATCCACTG
Downstream 100 bases:
>100_bases TGCGGCGCGTGCCGATCCTCCCGACGATCGTGGTGCTGGTTGCCGTGGCGATCATGGTGTGGCTGGGCTTCTGGCAGCTT GATCGGCTGGGGCAGAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MPDGESQNTKGQPGITQAALFGLCPRCGSKGLWAGPAALAERCPACGLEFERHEPRGRGMYLVVLPVTILLVLAALKLDD LVRLPTWALIALWGVVVPTVVIAALRYAKAVALMARLEKEGLL
Sequences:
>Translated_123_residues MPDGESQNTKGQPGITQAALFGLCPRCGSKGLWAGPAALAERCPACGLEFERHEPRGRGMYLVVLPVTILLVLAALKLDD LVRLPTWALIALWGVVVPTVVIAALRYAKAVALMARLEKEGLL >Mature_122_residues PDGESQNTKGQPGITQAALFGLCPRCGSKGLWAGPAALAERCPACGLEFERHEPRGRGMYLVVLPVTILLVLAALKLDDL VRLPTWALIALWGVVVPTVVIAALRYAKAVALMARLEKEGLL
Specific function: Unknown
COG id: COG5349
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13145; Mature: 13014
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDGESQNTKGQPGITQAALFGLCPRCGSKGLWAGPAALAERCPACGLEFERHEPRGRGM CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCE YLVVLPVTILLVLAALKLDDLVRLPTWALIALWGVVVPTVVIAALRYAKAVALMARLEKE EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLL CCC >Mature Secondary Structure PDGESQNTKGQPGITQAALFGLCPRCGSKGLWAGPAALAERCPACGLEFERHEPRGRGM CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCE YLVVLPVTILLVLAALKLDDLVRLPTWALIALWGVVVPTVVIAALRYAKAVALMARLEKE EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA