Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87198847

Identifier: 87198847

GI number: 87198847

Start: 878597

End: 879250

Strand: Direct

Name: 87198847

Synonym: Saro_0825

Alternate gene names: NA

Gene position: 878597-879250 (Clockwise)

Preceding gene: 87198846

Following gene: 87198849

Centisome position: 24.67

GC content: 68.04

Gene sequence:

>654_bases
ATGCCATTGCGCGCATCGCCGGCAATCCCGGCGTTAGCCGTGGCGGGCGCCTTGGTGCTGGCCGGTTGCGGGAAGAAGGA
AGCGCCTCCGCCGCCCGAAGCGACCGAGACCGGTTCCGCCGTGGTCAGCGCATCGGGCGCGGCGGTGGAAAGCGAGTTCG
GTACGCCGATCAAGGATCGCGTGGCCACGCTGGGCTTTCTCAACAAGCGCAACAACATCACCCAGGACGTCGTGCTGAAG
AGCGGCGAATCGCGCCGCATCGGCAATGCCATCGTCAAGCTTGCCACCTGCGAGAAGACCGCACCGTGGGAAGATCCGCC
CGAAACCGGCGCCTTCGTCCAGCTCTTCGTCGAAGAGCGCGCCACGACCCAGGAAAAGCTCGCCTGGCGCAAGGTCTTCT
CGGGGTGGCTGTTCCGTAACGCACCTTCGCTGAACGTTGTCGAGCACCCGGTCTATGACGTGTGGGTCAAGGACTGCGCG
ATGACGTTCCCCGGCGAGGAAGAGCCGGCGCCTTCGGCCCGCAGCGCGGCAAAACCCGCCGGCAGCCCGAGCGCCGCGGC
ATCGCCCTTGACGACGCCGGCGCCGCCAATGCCTAGCCCGTCGCCGACGGCATCGGCCAGCGCCCGCGCTGCCGCAAGCT
CGCCCGACGAATAG

Upstream 100 bases:

>100_bases
CCGGCACGGCCAGCGCCTATCGTCCGCAGGGTGCGCTGGAACGTGGCGGCAAGCGTGCCGCCGCGACCGGCGACTACGAA
GCCTGGTCCCCGGAAGCCTG

Downstream 100 bases:

>100_bases
GGTCGCTGCGCCTTCGACAGAAGTTGAAGGTACTGCGATTGCGGGATTTCCACCGCGCCCAGTGAAGCGAGATGCGGGGT
GGTGAACTGGCAGTCGAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MPLRASPAIPALAVAGALVLAGCGKKEAPPPPEATETGSAVVSASGAAVESEFGTPIKDRVATLGFLNKRNNITQDVVLK
SGESRRIGNAIVKLATCEKTAPWEDPPETGAFVQLFVEERATTQEKLAWRKVFSGWLFRNAPSLNVVEHPVYDVWVKDCA
MTFPGEEEPAPSARSAAKPAGSPSAAASPLTTPAPPMPSPSPTASASARAAASSPDE

Sequences:

>Translated_217_residues
MPLRASPAIPALAVAGALVLAGCGKKEAPPPPEATETGSAVVSASGAAVESEFGTPIKDRVATLGFLNKRNNITQDVVLK
SGESRRIGNAIVKLATCEKTAPWEDPPETGAFVQLFVEERATTQEKLAWRKVFSGWLFRNAPSLNVVEHPVYDVWVKDCA
MTFPGEEEPAPSARSAAKPAGSPSAAASPLTTPAPPMPSPSPTASASARAAASSPDE
>Mature_216_residues
PLRASPAIPALAVAGALVLAGCGKKEAPPPPEATETGSAVVSASGAAVESEFGTPIKDRVATLGFLNKRNNITQDVVLKS
GESRRIGNAIVKLATCEKTAPWEDPPETGAFVQLFVEERATTQEKLAWRKVFSGWLFRNAPSLNVVEHPVYDVWVKDCAM
TFPGEEEPAPSARSAAKPAGSPSAAASPLTTPAPPMPSPSPTASASARAAASSPDE

Specific function: Unknown

COG id: COG4765

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22498; Mature: 22367

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLRASPAIPALAVAGALVLAGCGKKEAPPPPEATETGSAVVSASGAAVESEFGTPIKDR
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHCCCCHHHH
VATLGFLNKRNNITQDVVLKSGESRRIGNAIVKLATCEKTAPWEDPPETGAFVQLFVEER
HHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
ATTQEKLAWRKVFSGWLFRNAPSLNVVEHPVYDVWVKDCAMTFPGEEEPAPSARSAAKPA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCC
GSPSAAASPLTTPAPPMPSPSPTASASARAAASSPDE
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
PLRASPAIPALAVAGALVLAGCGKKEAPPPPEATETGSAVVSASGAAVESEFGTPIKDR
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHCCCCHHHH
VATLGFLNKRNNITQDVVLKSGESRRIGNAIVKLATCEKTAPWEDPPETGAFVQLFVEER
HHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
ATTQEKLAWRKVFSGWLFRNAPSLNVVEHPVYDVWVKDCAMTFPGEEEPAPSARSAAKPA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCC
GSPSAAASPLTTPAPPMPSPSPTASASARAAASSPDE
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA