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The map label for this gene is cirA [C]

Identifier: 87198809

GI number: 87198809

Start: 834388

End: 836754

Strand: Direct

Name: cirA [C]

Synonym: Saro_0787

Alternate gene names: 87198809

Gene position: 834388-836754 (Clockwise)

Preceding gene: 87198808

Following gene: 87198810

Centisome position: 23.43

GC content: 63.24

Gene sequence:

>2367_bases
ATGAACATCACCAGGAAGACCCGGCTCGTCCAGTCGGTATCGGTTGCAGCCATTGCGCTGTTCTCGTCAGTACCCGCATT
CGCCCAAGCCGCCGACGAACCGGCGGCGGCTCCCGGCGAAATCATCGTTACCGCACAGCGCCGCAGCGAGAACGTGCTCA
AGGTCCCGGTCAGCGTCACCGTGGTCAGCGCAGATCAACTGATCCAGCGCGGCGCCAATGACCTCACTGCTGTGACCAAG
CTCGCGCCGAGCCTTCAGGTGGCGCAGGACAACACCTTCTCGGTGCGCGGCGTCGGCACGGCAACTTTTGCCAACACCGT
TGAAGCCAGCGTCTCGCAGGTCGTGGACGATGTGGTTCTGGGCAACCGCGAATATGCGGCCAACGCGTTCTACGACGTGG
CGCGCGTCGAAGTCCTGAACGGGCCGCAGGGCCTGCTGTTCGGCAAGAACGCCTCTGCGGGTCTGGTCAACATCACCACC
AACAAGCCCAAGCTTGGCGAGCTGTCCTTCAGCGCCGATGGCGAGCTGGTGCAGCGTGCCCGTCCCGGCGACGATGGCAC
CGGCTACCAGATCCGCTCGACCGTCAACGCACCGCTGGGCGACAAGGCTGCGCTGCGGCTCAACGCGATCTACAGCGATC
AGGACCCGATTACCGTTTCCAGGGTCAACCCCGCGATGCGCAACGACCTCGGCCTCACCAACCTCGGCCTGCGCGCCAAG
CTGCTGTTCGAACCGACCGACAGCCTCTCGGTCTACTTGATCGGCGACTACAATCGCCAGCGCGGCATCACCGGCCGTTA
CGACATCACCTTCCGCCAGTTCGGCCCCGGCAGCCAGTACCCCGCCTATGGCCTTGCTGCTGGTCCGGAGAACTTCAACT
TCGCCGCAGAAGCGCCCAATTACCGCGACAGCGATACCGGCGGTCTTCAGGCCAATGTCAGCCTGAAGCTCGGCAACGGC
ATGGAGCTGACCAGCATCACCGCGTGGAAGCAGGCCAAGACCGACTTCCAGTTCGACTCCGACGAAACGGCAATCAACTT
CTTCAGCTACAACAGCGCTGACCAGAAGTACGACCAGTACTCGCAGGAACTGCGCCTTGCGCTGCCGACCGGCAATGCAC
TGACCGGCCAGTTCGGCCTCTACTACTACCGCTCGGTCGGCAACAGCTCGGGCTTCCGTGGCGGCAACAACGGTCTGCCC
GATGTCGTCGCGATCGGCTTCCCGTTCTGCATCGGCGCCACCGTCACGCAGGGACCGCCGCCGGCCTGTGGCGTCAACAA
CCGCTCGTTCCTCGGCCAGGACTTCCAGTATAGCCTCAAGAACGACAGCTACGCCGCGTTCGGCCAGCTCGGCTACCAAC
TGACCAATACCTTGAAGGTCACCGCCGGCGCTCGGCTGACTTACGAAAAGGCGAAGATCAACCTGCGCGAGAACTTCGGA
AACTACTTCGTCACCCTCGGCATCAAGAACAACGTCGCCAACCAGGCCACCGACGCCACGGACCTCAGCTACAAGCTGGG
CTTCGACTGGCAGGCAACGCCCGACCTGATGGTCTATGGCTTCTACGGCGAAGGCTTCAAGGGCCCGGGCTTCTCGAACA
CGGCTCCTGCTCCCGGTGCCGATCTGTCGGTTCGTCCGGAAATCTCGCGCGGCGGTGAGCTTGGCGTCAAGGGCAAGGCA
CTCGACGGCGCGCTGACCTTCAGCCTCTCGGGCTTCTACACGAAGTTCTATGACCTCCAGGTCCAGGCCTTCGTGCAGGC
GCTGCGCACCTTCGTTCTGGGCAACGCGGCCACGGCAACGACCAAGGGCATCGACTTCTCGTTCCAGGCCCGGCCCTTCG
AAGGCCTGACCTTGTCGGGTTCGGCATCCTATGCCGATGCCACGTTCGACGACTACCCGGGCGCCCAGTGCTACCCGACA
CAGGCGACCGGTGGCTGCAAGGCGGATATCAACTCGTCGCTGCCAGGCTTCGTCGGCACATTCAACGCCAAGGGCTATCA
GTTGCCGCTGTCGTCCAAGTTCACGGCGACACTTGGCGCTGAGTATGCCGCTCCGATCACGGACGGTCTAGAGGCGCAAT
TCGGCGTTGGCTACTACCATCGCTCGTCACAGTCGGCCGGCATCGGTGCCCCGTTCACCATCCCGACCTGGGACACGATC
GACCTGCGCGCCGGGATCAAGGCCGAGAACTGGAACATCAGCCTGTTCTGCAAGAACTGCACGAACGAGATCCGCCCGAT
CTCGATCGGGTCTGACGGCGGCGATGCCAACCCTGTTGGCGTCGCTCCGCCAGTGCTGACGTTGAACCAGCGCTTCAGCT
TTGAATCCGTCCGCACCATCGGCGTGCGTGCCGGCATCAACTTCTGA

Upstream 100 bases:

>100_bases
ACGCCACGATCATCCTGCCCTGAGCAGAGCAGGACGCCGGTTGTGCGGACCGGCGGGGCACAACTCACATCCGCACAAAG
GTTCTGAGGGAGGATAATCC

Downstream 100 bases:

>100_bases
TGCAAGCGGGGTCGCTGTCGAAAAGACGGCGGCCCCATTCTCTACTGCATCCGGCCACATCGGAGCAGCGATTTGAGCAG
GATGAACTGGATGACCTTGC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Domain Protein; NB-Dependent Receptor Plug; NB-Dependent Receptor-Like Protein; Nb-Dependent Receptor; NB Dependent Receptor; NB-Dependent Receptor Protein; Outer Membrane Receptor Family Protein; Receptor -Mostly Fe Transport; NB-Dependent Siderophore Receptor; NB-Dependent Receptor Plug Domain Protein; Nb-Dependent Outer Membrane Receptor Protein; Transporter OMR Family; Outer Membrane Receptor For Iron Transport; NB Dependent Receptor Protein

Number of amino acids: Translated: 788; Mature: 788

Protein sequence:

>788_residues
MNITRKTRLVQSVSVAAIALFSSVPAFAQAADEPAAAPGEIIVTAQRRSENVLKVPVSVTVVSADQLIQRGANDLTAVTK
LAPSLQVAQDNTFSVRGVGTATFANTVEASVSQVVDDVVLGNREYAANAFYDVARVEVLNGPQGLLFGKNASAGLVNITT
NKPKLGELSFSADGELVQRARPGDDGTGYQIRSTVNAPLGDKAALRLNAIYSDQDPITVSRVNPAMRNDLGLTNLGLRAK
LLFEPTDSLSVYLIGDYNRQRGITGRYDITFRQFGPGSQYPAYGLAAGPENFNFAAEAPNYRDSDTGGLQANVSLKLGNG
MELTSITAWKQAKTDFQFDSDETAINFFSYNSADQKYDQYSQELRLALPTGNALTGQFGLYYYRSVGNSSGFRGGNNGLP
DVVAIGFPFCIGATVTQGPPPACGVNNRSFLGQDFQYSLKNDSYAAFGQLGYQLTNTLKVTAGARLTYEKAKINLRENFG
NYFVTLGIKNNVANQATDATDLSYKLGFDWQATPDLMVYGFYGEGFKGPGFSNTAPAPGADLSVRPEISRGGELGVKGKA
LDGALTFSLSGFYTKFYDLQVQAFVQALRTFVLGNAATATTKGIDFSFQARPFEGLTLSGSASYADATFDDYPGAQCYPT
QATGGCKADINSSLPGFVGTFNAKGYQLPLSSKFTATLGAEYAAPITDGLEAQFGVGYYHRSSQSAGIGAPFTIPTWDTI
DLRAGIKAENWNISLFCKNCTNEIRPISIGSDGGDANPVGVAPPVLTLNQRFSFESVRTIGVRAGINF

Sequences:

>Translated_788_residues
MNITRKTRLVQSVSVAAIALFSSVPAFAQAADEPAAAPGEIIVTAQRRSENVLKVPVSVTVVSADQLIQRGANDLTAVTK
LAPSLQVAQDNTFSVRGVGTATFANTVEASVSQVVDDVVLGNREYAANAFYDVARVEVLNGPQGLLFGKNASAGLVNITT
NKPKLGELSFSADGELVQRARPGDDGTGYQIRSTVNAPLGDKAALRLNAIYSDQDPITVSRVNPAMRNDLGLTNLGLRAK
LLFEPTDSLSVYLIGDYNRQRGITGRYDITFRQFGPGSQYPAYGLAAGPENFNFAAEAPNYRDSDTGGLQANVSLKLGNG
MELTSITAWKQAKTDFQFDSDETAINFFSYNSADQKYDQYSQELRLALPTGNALTGQFGLYYYRSVGNSSGFRGGNNGLP
DVVAIGFPFCIGATVTQGPPPACGVNNRSFLGQDFQYSLKNDSYAAFGQLGYQLTNTLKVTAGARLTYEKAKINLRENFG
NYFVTLGIKNNVANQATDATDLSYKLGFDWQATPDLMVYGFYGEGFKGPGFSNTAPAPGADLSVRPEISRGGELGVKGKA
LDGALTFSLSGFYTKFYDLQVQAFVQALRTFVLGNAATATTKGIDFSFQARPFEGLTLSGSASYADATFDDYPGAQCYPT
QATGGCKADINSSLPGFVGTFNAKGYQLPLSSKFTATLGAEYAAPITDGLEAQFGVGYYHRSSQSAGIGAPFTIPTWDTI
DLRAGIKAENWNISLFCKNCTNEIRPISIGSDGGDANPVGVAPPVLTLNQRFSFESVRTIGVRAGINF
>Mature_788_residues
MNITRKTRLVQSVSVAAIALFSSVPAFAQAADEPAAAPGEIIVTAQRRSENVLKVPVSVTVVSADQLIQRGANDLTAVTK
LAPSLQVAQDNTFSVRGVGTATFANTVEASVSQVVDDVVLGNREYAANAFYDVARVEVLNGPQGLLFGKNASAGLVNITT
NKPKLGELSFSADGELVQRARPGDDGTGYQIRSTVNAPLGDKAALRLNAIYSDQDPITVSRVNPAMRNDLGLTNLGLRAK
LLFEPTDSLSVYLIGDYNRQRGITGRYDITFRQFGPGSQYPAYGLAAGPENFNFAAEAPNYRDSDTGGLQANVSLKLGNG
MELTSITAWKQAKTDFQFDSDETAINFFSYNSADQKYDQYSQELRLALPTGNALTGQFGLYYYRSVGNSSGFRGGNNGLP
DVVAIGFPFCIGATVTQGPPPACGVNNRSFLGQDFQYSLKNDSYAAFGQLGYQLTNTLKVTAGARLTYEKAKINLRENFG
NYFVTLGIKNNVANQATDATDLSYKLGFDWQATPDLMVYGFYGEGFKGPGFSNTAPAPGADLSVRPEISRGGELGVKGKA
LDGALTFSLSGFYTKFYDLQVQAFVQALRTFVLGNAATATTKGIDFSFQARPFEGLTLSGSASYADATFDDYPGAQCYPT
QATGGCKADINSSLPGFVGTFNAKGYQLPLSSKFTATLGAEYAAPITDGLEAQFGVGYYHRSSQSAGIGAPFTIPTWDTI
DLRAGIKAENWNISLFCKNCTNEIRPISIGSDGGDANPVGVAPPVLTLNQRFSFESVRTIGVRAGINF

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84069; Mature: 84069

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS00392 DDC_GAD_HDC_YDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITRKTRLVQSVSVAAIALFSSVPAFAQAADEPAAAPGEIIVTAQRRSENVLKVPVSVT
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEEEE
VVSADQLIQRGANDLTAVTKLAPSLQVAQDNTFSVRGVGTATFANTVEASVSQVVDDVVL
EEEHHHHHHCCCCHHHHHHHHCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHC
GNREYAANAFYDVARVEVLNGPQGLLFGKNASAGLVNITTNKPKLGELSFSADGELVQRA
CCCCHHHHHHEEEEEEEEECCCCCEEEECCCCCCEEEEECCCCCCCEEEECCCCHHHHHC
RPGDDGTGYQIRSTVNAPLGDKAALRLNAIYSDQDPITVSRVNPAMRNDLGLTNLGLRAK
CCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEECCHHHHCCCCCCCCCCEEE
LLFEPTDSLSVYLIGDYNRQRGITGRYDITFRQFGPGSQYPAYGLAAGPENFNFAAEAPN
EEECCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCEEECCCCCCCEEECCCC
YRDSDTGGLQANVSLKLGNGMELTSITAWKQAKTDFQFDSDETAINFFSYNSADQKYDQY
CCCCCCCCEEEEEEEEECCCCEEEEEEHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHH
SQELRLALPTGNALTGQFGLYYYRSVGNSSGFRGGNNGLPDVVAIGFPFCIGATVTQGPP
HCEEEEEECCCCCEECCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCHHHCCCCCCCCC
PACGVNNRSFLGQDFQYSLKNDSYAAFGQLGYQLTNTLKVTAGARLTYEKAKINLRENFG
CCCCCCCCCCCCCCCEEEECCCCEEHHHHHCCEEECEEEEECCCEEEEEEEEEEEEECCC
NYFVTLGIKNNVANQATDATDLSYKLGFDWQATPDLMVYGFYGEGFKGPGFSNTAPAPGA
CEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC
DLSVRPEISRGGELGVKGKALDGALTFSLSGFYTKFYDLQVQAFVQALRTFVLGNAATAT
CCEECCCCCCCCCCCCCCEECCCEEEEEECCCEEEEEHEEHHHHHHHHHHHHCCCCCCCE
TKGIDFSFQARPFEGLTLSGSASYADATFDDYPGAQCYPTQATGGCKADINSSLPGFVGT
ECCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEE
FNAKGYQLPLSSKFTATLGAEYAAPITDGLEAQFGVGYYHRSSQSAGIGAPFTIPTWDTI
ECCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCCCEE
DLRAGIKAENWNISLFCKNCTNEIRPISIGSDGGDANPVGVAPPVLTLNQRFSFESVRTI
EEECCCEECCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCCHHEEE
GVRAGINF
EEECCCCC
>Mature Secondary Structure
MNITRKTRLVQSVSVAAIALFSSVPAFAQAADEPAAAPGEIIVTAQRRSENVLKVPVSVT
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEEEE
VVSADQLIQRGANDLTAVTKLAPSLQVAQDNTFSVRGVGTATFANTVEASVSQVVDDVVL
EEEHHHHHHCCCCHHHHHHHHCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHC
GNREYAANAFYDVARVEVLNGPQGLLFGKNASAGLVNITTNKPKLGELSFSADGELVQRA
CCCCHHHHHHEEEEEEEEECCCCCEEEECCCCCCEEEEECCCCCCCEEEECCCCHHHHHC
RPGDDGTGYQIRSTVNAPLGDKAALRLNAIYSDQDPITVSRVNPAMRNDLGLTNLGLRAK
CCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEECCHHHHCCCCCCCCCCEEE
LLFEPTDSLSVYLIGDYNRQRGITGRYDITFRQFGPGSQYPAYGLAAGPENFNFAAEAPN
EEECCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCEEECCCCCCCEEECCCC
YRDSDTGGLQANVSLKLGNGMELTSITAWKQAKTDFQFDSDETAINFFSYNSADQKYDQY
CCCCCCCCEEEEEEEEECCCCEEEEEEHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHH
SQELRLALPTGNALTGQFGLYYYRSVGNSSGFRGGNNGLPDVVAIGFPFCIGATVTQGPP
HCEEEEEECCCCCEECCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCHHHCCCCCCCCC
PACGVNNRSFLGQDFQYSLKNDSYAAFGQLGYQLTNTLKVTAGARLTYEKAKINLRENFG
CCCCCCCCCCCCCCCEEEECCCCEEHHHHHCCEEECEEEEECCCEEEEEEEEEEEEECCC
NYFVTLGIKNNVANQATDATDLSYKLGFDWQATPDLMVYGFYGEGFKGPGFSNTAPAPGA
CEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC
DLSVRPEISRGGELGVKGKALDGALTFSLSGFYTKFYDLQVQAFVQALRTFVLGNAATAT
CCEECCCCCCCCCCCCCCEECCCEEEEEECCCEEEEEHEEHHHHHHHHHHHHCCCCCCCE
TKGIDFSFQARPFEGLTLSGSASYADATFDDYPGAQCYPTQATGGCKADINSSLPGFVGT
ECCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEE
FNAKGYQLPLSSKFTATLGAEYAAPITDGLEAQFGVGYYHRSSQSAGIGAPFTIPTWDTI
ECCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCCCEE
DLRAGIKAENWNISLFCKNCTNEIRPISIGSDGGDANPVGVAPPVLTLNQRFSFESVRTI
EEECCCEECCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCCHHEEE
GVRAGINF
EEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA