Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198693
Identifier: 87198693
GI number: 87198693
Start: 704132
End: 706129
Strand: Direct
Name: 87198693
Synonym: Saro_0669
Alternate gene names: NA
Gene position: 704132-706129 (Clockwise)
Preceding gene: 87198692
Following gene: 87198695
Centisome position: 19.77
GC content: 61.26
Gene sequence:
>1998_bases TTGAATTCCCGCCCACCCAGGACCGCCTCCGGAACTATCGCCAAGTTTCCATTCGGCCGTCAGCCCGGCCACGACGCCGG CACGGATGGCGACGTCTTCGTCGACGCTGTCGATGGGCTCGATACGAACGACGGCCTGAGCCCGGAAACAGCGGTGCGCA CGATCGAGCGCGGTCGGCAGATCATCTGCGCGATGGAAGGCGATCGCACCATGCGGATCATGGGAGACGGGGTGAAGTAC CGCGAAGCGGTGACGACAAACTCCTACAACCCGTTTCCAAATCCCAAGCTCACCAGCCTGACCGTGAAAGGCTACGGCAC GGACCTGCCATGGGTGTCGGGCGCTGAGATCGTACGTGGATTTGCGCCGTGCTCCGAAGAAGACGCTGCTATCCTGGGGA AAAACTGGCGCAACGTATTCAAGGCGACGTTTCCGGCAGACCTCATTACCGGGCACAAATCCTACTGGCGGATGATGACC ACCGAGAACGGTGTGCCGCTCAAGCTTGCGCAAGTGCGCGGCAACGAGAAAGTCCCGGCGTTCTTTCTCGACAGCGTTCT CACGATGATGAGTTCGGCCACTGATCCTACGATTTCGGCGGCGCTTAACGCCGAGAACCAAATTGCGACGATTAGGCATG ACGCGCTGCTGCCGAAATATACTGACCGCCAACTGGAGCAGGCGGTGGCGGCCGTCCACGTGTTCCCCAATTTCGTGCGC GCGCTTCGCGTCGAATCCGTTTCCGATTCAGTCCTTCACATCGAGCCGAACACCTTCCACTTCGGCGGATCGAAGGAGTA TCACTACAACCTGCTGAACCTCGCCGCCGAGATCGAGAAGGGCGGCTGGGCCTATCGCCTGGAGGGCGGTCGCATCACTC TTTACGTCTGGCCGCGAGATCCCCGGAACCTCAAATCAGGCATCGAGGTCGCTGCGCGTAAGTTCGCCTGGAAGCATTCG AACAATACCCGGGCCGTTCACTTCGAGAATATCGGCTTCGAGATGTGCGCGAACGACCGCGCCGCTGCGGACGGCATCCT GCTGAACCTGAACTACGGGGACAACATTACCGTCAGCCAGTGCCATTTCCGGCTCCTGTCGGGCGAGCAGAACCAGATGC TCTACGTGAAGTGGGGCAACAACATCCGGGTGGAATACTGTTCGTTCGAGCTGGGCCAGGGCACCTATGGCTGCAACATG GACGGCCCTTCGGCGAAGATGGCGACGGGCAACCGGCTGGTGAACTGCTTCTTCTCGGACCTGTCATTCACGCCGAGCCG GCACCAGAAGCAATCGCTGATGGCGGTTGCGAACAACTACATTCGCCGCACCAGCGCAGCGGGACACGCCAACACCAACG ATTTCAAGGGCGGCTGCGACCGATGCCTGTGCCTCGGGTTGGTGACCGATATGTCCGAGCAAGGTCGGCCATATCAGGGT TACGCCACAAATCAGGGCTCGAGCCGTATTCTCTATCTCCATTCCATCCTGCCGACGAACAGCGATGGCCGCGCCTACAT GGACCAGACGACGTCGCGCGACGTTCTCCCCCACGCTGGCGGCGACAATGCACTGATCAACTGCTGGGTTCCGCACGAGC GTGACGGGAAGTGGACGACCTTCGGCGCAATCATGGTCGGCCGCACGCTTCCCGCGTCAAACTGGTTGGTGCTGAATTGC ATCGCACCAACGATCGTCGCGGCAGGTGGCTACGTGTTCCGGCGCAACAACCTGCTCACCGACGCGAAGGCCAAGGCCGC CGATGCGAGTGAGACCGTCCTTGAATACCGCGCTGTCTACAGCGACCCCGACAACCGCAACTGGGCGGCGAAGTCCGGCA GTCCGCTGGACTGCAAGAAGGGCTACCCCGTTGCGGCGATACTCGAGCAATGGGAAGAGTTGTTTCCGGACGTCGATTTC CGCCATGACCCCTGGGGACGGGCGTGGGACCCGATGAACCCGGGGATCGGACCGTGGGGGAGGCCTTGGGCGCTGTGA
Upstream 100 bases:
>100_bases GCGGGGGCTTTGCCCCGGTAGCTGTTGCCTACCTGATCGGGGGAACTATCACGGTCCGAGCCGGTATGCCGTCGGAGTCG ACCGCAAGGAGTATCCCCGC
Downstream 100 bases:
>100_bases GCGCGGCTAGGCCGCGCTCGGGGAGACGCGCCGTAGCAGCTCGTTGACGATCTTCTTCAGCTTCCGCCAGGCGCGGTCTG GCCGGCGTACCAGCTTCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 665; Mature: 665
Protein sequence:
>665_residues MNSRPPRTASGTIAKFPFGRQPGHDAGTDGDVFVDAVDGLDTNDGLSPETAVRTIERGRQIICAMEGDRTMRIMGDGVKY REAVTTNSYNPFPNPKLTSLTVKGYGTDLPWVSGAEIVRGFAPCSEEDAAILGKNWRNVFKATFPADLITGHKSYWRMMT TENGVPLKLAQVRGNEKVPAFFLDSVLTMMSSATDPTISAALNAENQIATIRHDALLPKYTDRQLEQAVAAVHVFPNFVR ALRVESVSDSVLHIEPNTFHFGGSKEYHYNLLNLAAEIEKGGWAYRLEGGRITLYVWPRDPRNLKSGIEVAARKFAWKHS NNTRAVHFENIGFEMCANDRAAADGILLNLNYGDNITVSQCHFRLLSGEQNQMLYVKWGNNIRVEYCSFELGQGTYGCNM DGPSAKMATGNRLVNCFFSDLSFTPSRHQKQSLMAVANNYIRRTSAAGHANTNDFKGGCDRCLCLGLVTDMSEQGRPYQG YATNQGSSRILYLHSILPTNSDGRAYMDQTTSRDVLPHAGGDNALINCWVPHERDGKWTTFGAIMVGRTLPASNWLVLNC IAPTIVAAGGYVFRRNNLLTDAKAKAADASETVLEYRAVYSDPDNRNWAAKSGSPLDCKKGYPVAAILEQWEELFPDVDF RHDPWGRAWDPMNPGIGPWGRPWAL
Sequences:
>Translated_665_residues MNSRPPRTASGTIAKFPFGRQPGHDAGTDGDVFVDAVDGLDTNDGLSPETAVRTIERGRQIICAMEGDRTMRIMGDGVKY REAVTTNSYNPFPNPKLTSLTVKGYGTDLPWVSGAEIVRGFAPCSEEDAAILGKNWRNVFKATFPADLITGHKSYWRMMT TENGVPLKLAQVRGNEKVPAFFLDSVLTMMSSATDPTISAALNAENQIATIRHDALLPKYTDRQLEQAVAAVHVFPNFVR ALRVESVSDSVLHIEPNTFHFGGSKEYHYNLLNLAAEIEKGGWAYRLEGGRITLYVWPRDPRNLKSGIEVAARKFAWKHS NNTRAVHFENIGFEMCANDRAAADGILLNLNYGDNITVSQCHFRLLSGEQNQMLYVKWGNNIRVEYCSFELGQGTYGCNM DGPSAKMATGNRLVNCFFSDLSFTPSRHQKQSLMAVANNYIRRTSAAGHANTNDFKGGCDRCLCLGLVTDMSEQGRPYQG YATNQGSSRILYLHSILPTNSDGRAYMDQTTSRDVLPHAGGDNALINCWVPHERDGKWTTFGAIMVGRTLPASNWLVLNC IAPTIVAAGGYVFRRNNLLTDAKAKAADASETVLEYRAVYSDPDNRNWAAKSGSPLDCKKGYPVAAILEQWEELFPDVDF RHDPWGRAWDPMNPGIGPWGRPWAL >Mature_665_residues MNSRPPRTASGTIAKFPFGRQPGHDAGTDGDVFVDAVDGLDTNDGLSPETAVRTIERGRQIICAMEGDRTMRIMGDGVKY REAVTTNSYNPFPNPKLTSLTVKGYGTDLPWVSGAEIVRGFAPCSEEDAAILGKNWRNVFKATFPADLITGHKSYWRMMT TENGVPLKLAQVRGNEKVPAFFLDSVLTMMSSATDPTISAALNAENQIATIRHDALLPKYTDRQLEQAVAAVHVFPNFVR ALRVESVSDSVLHIEPNTFHFGGSKEYHYNLLNLAAEIEKGGWAYRLEGGRITLYVWPRDPRNLKSGIEVAARKFAWKHS NNTRAVHFENIGFEMCANDRAAADGILLNLNYGDNITVSQCHFRLLSGEQNQMLYVKWGNNIRVEYCSFELGQGTYGCNM DGPSAKMATGNRLVNCFFSDLSFTPSRHQKQSLMAVANNYIRRTSAAGHANTNDFKGGCDRCLCLGLVTDMSEQGRPYQG YATNQGSSRILYLHSILPTNSDGRAYMDQTTSRDVLPHAGGDNALINCWVPHERDGKWTTFGAIMVGRTLPASNWLVLNC IAPTIVAAGGYVFRRNNLLTDAKAKAADASETVLEYRAVYSDPDNRNWAAKSGSPLDCKKGYPVAAILEQWEELFPDVDF RHDPWGRAWDPMNPGIGPWGRPWAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73589; Mature: 73589
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSRPPRTASGTIAKFPFGRQPGHDAGTDGDVFVDAVDGLDTNDGLSPETAVRTIERGRQ CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCE IICAMEGDRTMRIMGDGVKYREAVTTNSYNPFPNPKLTSLTVKGYGTDLPWVSGAEIVRG EEEEECCCCEEEEEECCCEEHHEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHC FAPCSEEDAAILGKNWRNVFKATFPADLITGHKSYWRMMTTENGVPLKLAQVRGNEKVPA CCCCCCCCCHHHCCCHHHHHHHCCCHHHHCCCHHHEEEEECCCCCCEEEEEECCCCCCCH FFLDSVLTMMSSATDPTISAALNAENQIATIRHDALLPKYTDRQLEQAVAAVHVFPNFVR HHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHH ALRVESVSDSVLHIEPNTFHFGGSKEYHYNLLNLAAEIEKGGWAYRLEGGRITLYVWPRD HHHHHCCCCCEEEECCCEEECCCCCCEEHHHHHHHHHHCCCCEEEEEECCEEEEEECCCC PRNLKSGIEVAARKFAWKHSNNTRAVHFENIGFEMCANDRAAADGILLNLNYGDNITVSQ HHHHHHHHHHHHHHHEEECCCCCEEEEEECCCEEEECCCCCCCCEEEEEECCCCCEEHHH CHFRLLSGEQNQMLYVKWGNNIRVEYCSFELGQGTYGCNMDGPSAKMATGNRLVNCFFSD HEEEEECCCCCCEEEEEECCCEEEEEEEEEECCCEECCCCCCCCCEECCCCCEEEEEECC LSFTPSRHQKQSLMAVANNYIRRTSAAGHANTNDFKGGCDRCLCLGLVTDMSEQGRPYQG CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC YATNQGSSRILYLHSILPTNSDGRAYMDQTTSRDVLPHAGGDNALINCWVPHERDGKWTT EECCCCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEE FGAIMVGRTLPASNWLVLNCIAPTIVAAGGYVFRRNNLLTDAKAKAADASETVLEYRAVY EEEEEEECCCCCCCCEEEEEHHHHHHHCCCEEEECCCCCCCCHHHCCCHHHHHHHHHHHH SDPDNRNWAAKSGSPLDCKKGYPVAAILEQWEELFPDVDFRHDPWGRAWDPMNPGIGPWG CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC RPWAL CCCCC >Mature Secondary Structure MNSRPPRTASGTIAKFPFGRQPGHDAGTDGDVFVDAVDGLDTNDGLSPETAVRTIERGRQ CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCE IICAMEGDRTMRIMGDGVKYREAVTTNSYNPFPNPKLTSLTVKGYGTDLPWVSGAEIVRG EEEEECCCCEEEEEECCCEEHHEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHC FAPCSEEDAAILGKNWRNVFKATFPADLITGHKSYWRMMTTENGVPLKLAQVRGNEKVPA CCCCCCCCCHHHCCCHHHHHHHCCCHHHHCCCHHHEEEEECCCCCCEEEEEECCCCCCCH FFLDSVLTMMSSATDPTISAALNAENQIATIRHDALLPKYTDRQLEQAVAAVHVFPNFVR HHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHH ALRVESVSDSVLHIEPNTFHFGGSKEYHYNLLNLAAEIEKGGWAYRLEGGRITLYVWPRD HHHHHCCCCCEEEECCCEEECCCCCCEEHHHHHHHHHHCCCCEEEEEECCEEEEEECCCC PRNLKSGIEVAARKFAWKHSNNTRAVHFENIGFEMCANDRAAADGILLNLNYGDNITVSQ HHHHHHHHHHHHHHHEEECCCCCEEEEEECCCEEEECCCCCCCCEEEEEECCCCCEEHHH CHFRLLSGEQNQMLYVKWGNNIRVEYCSFELGQGTYGCNMDGPSAKMATGNRLVNCFFSD HEEEEECCCCCCEEEEEECCCEEEEEEEEEECCCEECCCCCCCCCEECCCCCEEEEEECC LSFTPSRHQKQSLMAVANNYIRRTSAAGHANTNDFKGGCDRCLCLGLVTDMSEQGRPYQG CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC YATNQGSSRILYLHSILPTNSDGRAYMDQTTSRDVLPHAGGDNALINCWVPHERDGKWTT EECCCCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEE FGAIMVGRTLPASNWLVLNCIAPTIVAAGGYVFRRNNLLTDAKAKAADASETVLEYRAVY EEEEEEECCCCCCCCEEEEEHHHHHHHCCCEEEECCCCCCCCHHHCCCHHHHHHHHHHHH SDPDNRNWAAKSGSPLDCKKGYPVAAILEQWEELFPDVDFRHDPWGRAWDPMNPGIGPWG CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC RPWAL CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA