Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198690
Identifier: 87198690
GI number: 87198690
Start: 702737
End: 703276
Strand: Direct
Name: 87198690
Synonym: Saro_0666
Alternate gene names: NA
Gene position: 702737-703276 (Clockwise)
Preceding gene: 87198689
Following gene: 87198691
Centisome position: 19.73
GC content: 65.93
Gene sequence:
>540_bases GTGACCATCGAAGCCATGATCGAGAACACGATCGGCAAGGAGGGGGGCTACAACAACCACCCGGCCGATAAGGGTGGGCC GACGAAATGGGGCATCACCGAGCGGGTCGCGCGCAAGTACGGCTATGCCGGGGACATGCGCGACCTTCCCCGCGAGAAGG CTGTTGCGATCTACCGGCAGGCCTATGCGATCGAGCCGGGCTTCGCGGCCGTCGCGGAGATCATGCCCAGCGTCGGGGAA GAACTGTTCGATACCGGCGTCAACATGGGGCCGGCCGTTCCCGCGATCTGGTTGCAGGAGTGGCTCAACGCCTTCAACGG CGGCGGGGCGCTCTATCCCGACATCAAGGAAGACGGCGATATCGGCCCTGCTACGCTGGCGGCACTGAGGGCGTTCAAGG CGGCTCGCGGGCCCGAGGCTGAAACGGTGCTGCTCCGTGCGCTGAATTGCAGCCAGGGCGAGCGATACAAGGTGCTGTCG CGGAACCGGGCTGCGAACGAGGCCTTTACGTGGGGCTGGCTGCGGACGCGCGTCGCATGA
Upstream 100 bases:
>100_bases AGCGCCAGGCGCTGCTGACGACCTCTCAGGACAAGAACTACAGCGAGATCGAGCGCCGGGTAACGGTGCTTGAAGGCTAC CACAAGCAGGGAGGCGGCCA
Downstream 100 bases:
>100_bases ACCGCGTTCCCCATATTCGCATCGTCGTCGGCGCGAGCCTGCTCGCCGTTCTTGGCTACTTCGGCTTCTCGGTCTGGGTC TTTGGCTGGACCGCCGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MTIEAMIENTIGKEGGYNNHPADKGGPTKWGITERVARKYGYAGDMRDLPREKAVAIYRQAYAIEPGFAAVAEIMPSVGE ELFDTGVNMGPAVPAIWLQEWLNAFNGGGALYPDIKEDGDIGPATLAALRAFKAARGPEAETVLLRALNCSQGERYKVLS RNRAANEAFTWGWLRTRVA
Sequences:
>Translated_179_residues MTIEAMIENTIGKEGGYNNHPADKGGPTKWGITERVARKYGYAGDMRDLPREKAVAIYRQAYAIEPGFAAVAEIMPSVGE ELFDTGVNMGPAVPAIWLQEWLNAFNGGGALYPDIKEDGDIGPATLAALRAFKAARGPEAETVLLRALNCSQGERYKVLS RNRAANEAFTWGWLRTRVA >Mature_178_residues TIEAMIENTIGKEGGYNNHPADKGGPTKWGITERVARKYGYAGDMRDLPREKAVAIYRQAYAIEPGFAAVAEIMPSVGEE LFDTGVNMGPAVPAIWLQEWLNAFNGGGALYPDIKEDGDIGPATLAALRAFKAARGPEAETVLLRALNCSQGERYKVLSR NRAANEAFTWGWLRTRVA
Specific function: Unknown
COG id: COG3926
COG function: function code R; Putative secretion activating protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19517; Mature: 19386
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIEAMIENTIGKEGGYNNHPADKGGPTKWGITERVARKYGYAGDMRDLPREKAVAIYRQ CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHCCHHHHHHHHHH AYAIEPGFAAVAEIMPSVGEELFDTGVNMGPAVPAIWLQEWLNAFNGGGALYPDIKEDGD HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC IGPATLAALRAFKAARGPEAETVLLRALNCSQGERYKVLSRNRAANEAFTWGWLRTRVA CCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEHHHHCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TIEAMIENTIGKEGGYNNHPADKGGPTKWGITERVARKYGYAGDMRDLPREKAVAIYRQ CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHCCHHHHHHHHHH AYAIEPGFAAVAEIMPSVGEELFDTGVNMGPAVPAIWLQEWLNAFNGGGALYPDIKEDGD HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC IGPATLAALRAFKAARGPEAETVLLRALNCSQGERYKVLSRNRAANEAFTWGWLRTRVA CCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEHHHHCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA