Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87198688

Identifier: 87198688

GI number: 87198688

Start: 700231

End: 702399

Strand: Direct

Name: 87198688

Synonym: Saro_0664

Alternate gene names: NA

Gene position: 700231-702399 (Clockwise)

Preceding gene: 87198687

Following gene: 87198689

Centisome position: 19.66

GC content: 61.92

Gene sequence:

>2169_bases
ATGCCGACCGCTGAGGAATGGGCAGTGCAAGCCCAGGCCAGTGCAATTGCTGCGTCGAGTGCCGCGTCCGGGCTCGCTGC
AACGCTGGCGTTGGTAGATGACCGGAAGGAAGCGGTCGTAAACATGGCCGACTCTGTAGAGTCGTCTGCCTTGCTGGCTA
CAACGCAAGCCAGCACAGCGACGGCGCAAGCTGCCCTCGCAATTGGGGCTGCTACGAATTTGCAGGCGGAAGCTATTGGG
GCGAGGCAGGGTGGCACAGTTGCCGACACCGGCAAGCAGGTGTTGTCGCTCGTCGGGATAGACGGCGGCACCTCCAACCT
GACGGCCACGTTTGCCCGTTGGGCCCGGTTCCGCGATGCAGGCTCGGTCGACGACGAAACGACTATCAAGACTGGATCGA
TCGTATCGGGCATCGCCCTGACCGCCGTTGTCCTTGCGACGGCAGCAAAGGCGCGCGGCAGGGTTTGGCGGCGGCCACTG
TCGAGCGGTTCGCTGAATGCGGCACCGGGCTCCGCGCCAGACGACGTCCTCCTTCGGGATACCGGAATTGTCGCGATCGC
CGACGATCTCCTGACGATGGTCGGTTTGTCGCAGATCTACCTCAACATCCCGGTCACCAAGTTTGAAGTGCTTGCCGGCT
ACGCCTACGGCTTCGACTTCGAGATCTACGACGCTTCGAATACGCTGCTCACCGCTACGGCGAGATACACCACAACGGCC
GCGCTCGCGCAGCGTCACGCCGGGTTCTATTATGCGACCACGGGGGCGGGCAGCTTCACGGCGCAGACGACGACGCGCCC
GATCCGGATGGGCTATTCCACGCCGAGTATCACTTCCAACCTGACCGACCTCGAGAAAAAGGCCGAGCGCAAGCTGGCGG
CGACGGCGAACTCGAGCAAGTTGACGGATCTCGAGCGCTTGGCGATCTCGCGCCAGGGCGCCTGGTCCGGGCCGAACAAG
ATCATTCGGCCGAACTACCCCTCCTATCGGCACGGCCTGGCGCGCCTCGGGCTTACCGATGGTGCATATGGCGTCGACTA
TGGTCCGCGCATTGCGCTGGCGGACATGACTGAAATGACGGCGGTTACCGGCGTGAACCTCGGGAGCTCGGGGCAAATTC
GCTTCGAGAGCGGCAGTGCGAACAGCCCCAAGGGAGCGGTCTATTCCGGCCTCAAGCAGGTGGGCTCGCGCGGGATCTAC
CAGCCTACCGCCAACTGGGCCCGGCTGTTCCTGACCGACTGCTACATGAACGGGCAGACTACGGTCGGCAAGCCGGTGGA
CATCCAGCAGGTGGGGGACAGCGGGGTGACCAAGTTCCCCTATGTCGAACTCGAGTATTGCGACTTCCGCTATTTCTCGG
CCGGCATGGGCAACCTCTACAACGGGGCGATCCGCAAGAGCCTGATCCTGCACAGCGGTGCCAACACGCTCCAGATCCAG
CAAGAATATGACAACGGCTGCGCCCTTATCCTGGAACAAAACCTGTTCATGTTCGCCAGCACCATCGAAGCCGGCGCCAT
TTCATCCAGCCACGGCGATGTGCTGGAAATGAACATGGCCCGCAACGCATCGTGTGTCGGCAACGTCTATTACATGCCGT
CGACCGGGACGACCTACGATCCCGGCTCCTATGGCTCAACCAACTGCATCAGGCATTCTGCTCAGTCGTCGGCGCCGATC
AGCAACGTCTATCACCTGGGCGAGCTGATCGTCGGCGGCAACAGCCCGGTGGGCATGAACATGCGCGGCGGGACCATCCT
GAACATGCTGTTCGCCTTCAACAAGTACGGGGGCACCGAATACAGTTCGGTCAACAGCTACATCGCTATGACCGGTCCGC
AGACGGGCGATACCGGCATCACGACCGATTGGTGCAACCTTGCGTTCTTCGACGAATATCGCGTCGATGGCACGCCGATG
CCAATTGGCGGCGGCACTCCGGGTACGGTCAACAACGCAGTGCCAGCTACCTATTATGCGCGGCCTGCGAACGCCTACCG
AACGAACGAAGAGAAATGGGGCATATTCAACTGGGATAAGGCGCGCGCGACGCCCAAGTTCATCGAGGCGCTGCAGCTTC
TGGGGCTGGCGACGGGGCGGACGATCCTCGACAGCAATAACGATTTGAACGCTGAATATGCCCTCGGCGCTCTGAAGGCC
ACGCTGTGA

Upstream 100 bases:

>100_bases
CACGCACGCTCAGCTTCCGTCGACTTGTCTCACCACAGCGCTTGGTACTGCTGGCGGACTGACGCCGCTTGTCCGTGCCC
GCATTGCATAAGGAACTAGT

Downstream 100 bases:

>100_bases
ACTCAGGTGACACCGGCAACGCCGCACAGGTCCGCCTGATCGCGGAGCAGGTAGCCGAGGCTGCCGTCATCAAGTTCGCA
GCGGAGCATCCGGAATTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 722; Mature: 721

Protein sequence:

>722_residues
MPTAEEWAVQAQASAIAASSAASGLAATLALVDDRKEAVVNMADSVESSALLATTQASTATAQAALAIGAATNLQAEAIG
ARQGGTVADTGKQVLSLVGIDGGTSNLTATFARWARFRDAGSVDDETTIKTGSIVSGIALTAVVLATAAKARGRVWRRPL
SSGSLNAAPGSAPDDVLLRDTGIVAIADDLLTMVGLSQIYLNIPVTKFEVLAGYAYGFDFEIYDASNTLLTATARYTTTA
ALAQRHAGFYYATTGAGSFTAQTTTRPIRMGYSTPSITSNLTDLEKKAERKLAATANSSKLTDLERLAISRQGAWSGPNK
IIRPNYPSYRHGLARLGLTDGAYGVDYGPRIALADMTEMTAVTGVNLGSSGQIRFESGSANSPKGAVYSGLKQVGSRGIY
QPTANWARLFLTDCYMNGQTTVGKPVDIQQVGDSGVTKFPYVELEYCDFRYFSAGMGNLYNGAIRKSLILHSGANTLQIQ
QEYDNGCALILEQNLFMFASTIEAGAISSSHGDVLEMNMARNASCVGNVYYMPSTGTTYDPGSYGSTNCIRHSAQSSAPI
SNVYHLGELIVGGNSPVGMNMRGGTILNMLFAFNKYGGTEYSSVNSYIAMTGPQTGDTGITTDWCNLAFFDEYRVDGTPM
PIGGGTPGTVNNAVPATYYARPANAYRTNEEKWGIFNWDKARATPKFIEALQLLGLATGRTILDSNNDLNAEYALGALKA
TL

Sequences:

>Translated_722_residues
MPTAEEWAVQAQASAIAASSAASGLAATLALVDDRKEAVVNMADSVESSALLATTQASTATAQAALAIGAATNLQAEAIG
ARQGGTVADTGKQVLSLVGIDGGTSNLTATFARWARFRDAGSVDDETTIKTGSIVSGIALTAVVLATAAKARGRVWRRPL
SSGSLNAAPGSAPDDVLLRDTGIVAIADDLLTMVGLSQIYLNIPVTKFEVLAGYAYGFDFEIYDASNTLLTATARYTTTA
ALAQRHAGFYYATTGAGSFTAQTTTRPIRMGYSTPSITSNLTDLEKKAERKLAATANSSKLTDLERLAISRQGAWSGPNK
IIRPNYPSYRHGLARLGLTDGAYGVDYGPRIALADMTEMTAVTGVNLGSSGQIRFESGSANSPKGAVYSGLKQVGSRGIY
QPTANWARLFLTDCYMNGQTTVGKPVDIQQVGDSGVTKFPYVELEYCDFRYFSAGMGNLYNGAIRKSLILHSGANTLQIQ
QEYDNGCALILEQNLFMFASTIEAGAISSSHGDVLEMNMARNASCVGNVYYMPSTGTTYDPGSYGSTNCIRHSAQSSAPI
SNVYHLGELIVGGNSPVGMNMRGGTILNMLFAFNKYGGTEYSSVNSYIAMTGPQTGDTGITTDWCNLAFFDEYRVDGTPM
PIGGGTPGTVNNAVPATYYARPANAYRTNEEKWGIFNWDKARATPKFIEALQLLGLATGRTILDSNNDLNAEYALGALKA
TL
>Mature_721_residues
PTAEEWAVQAQASAIAASSAASGLAATLALVDDRKEAVVNMADSVESSALLATTQASTATAQAALAIGAATNLQAEAIGA
RQGGTVADTGKQVLSLVGIDGGTSNLTATFARWARFRDAGSVDDETTIKTGSIVSGIALTAVVLATAAKARGRVWRRPLS
SGSLNAAPGSAPDDVLLRDTGIVAIADDLLTMVGLSQIYLNIPVTKFEVLAGYAYGFDFEIYDASNTLLTATARYTTTAA
LAQRHAGFYYATTGAGSFTAQTTTRPIRMGYSTPSITSNLTDLEKKAERKLAATANSSKLTDLERLAISRQGAWSGPNKI
IRPNYPSYRHGLARLGLTDGAYGVDYGPRIALADMTEMTAVTGVNLGSSGQIRFESGSANSPKGAVYSGLKQVGSRGIYQ
PTANWARLFLTDCYMNGQTTVGKPVDIQQVGDSGVTKFPYVELEYCDFRYFSAGMGNLYNGAIRKSLILHSGANTLQIQQ
EYDNGCALILEQNLFMFASTIEAGAISSSHGDVLEMNMARNASCVGNVYYMPSTGTTYDPGSYGSTNCIRHSAQSSAPIS
NVYHLGELIVGGNSPVGMNMRGGTILNMLFAFNKYGGTEYSSVNSYIAMTGPQTGDTGITTDWCNLAFFDEYRVDGTPMP
IGGGTPGTVNNAVPATYYARPANAYRTNEEKWGIFNWDKARATPKFIEALQLLGLATGRTILDSNNDLNAEYALGALKAT
L

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76256; Mature: 76125

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTAEEWAVQAQASAIAASSAASGLAATLALVDDRKEAVVNMADSVESSALLATTQASTA
CCCHHHHHHHHHHHHHHHHHHHCCHHEEEEHHCCHHHHHHHHHHHCCCCEEEEECCCCHH
TAQAALAIGAATNLQAEAIGARQGGTVADTGKQVLSLVGIDGGTSNLTATFARWARFRDA
HHHHHEEECCCCCCCHHEECCCCCCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCC
GSVDDETTIKTGSIVSGIALTAVVLATAAKARGRVWRRPLSSGSLNAAPGSAPDDVLLRD
CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEC
TGIVAIADDLLTMVGLSQIYLNIPVTKFEVLAGYAYGFDFEIYDASNTLLTATARYTTTA
CCEEEEHHHHHHHHCHHEEEEECCCHHEEEHEEEEECCEEEEEECCCEEEEEEEHHHHHH
ALAQRHAGFYYATTGAGSFTAQTTTRPIRMGYSTPSITSNLTDLEKKAERKLAATANSSK
HHHHHCCCEEEEECCCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCH
LTDLERLAISRQGAWSGPNKIIRPNYPSYRHGLARLGLTDGAYGVDYGPRIALADMTEMT
HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHH
AVTGVNLGSSGQIRFESGSANSPKGAVYSGLKQVGSRGIYQPTANWARLFLTDCYMNGQT
HHEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHEEEEHHEECCCC
TVGKPVDIQQVGDSGVTKFPYVELEYCDFRYFSAGMGNLYNGAIRKSLILHSGANTLQIQ
CCCCCCCHHHCCCCCCCCCCEEEEEECCEEEECCCCCHHHHHHHHHHHEEECCCCEEEEE
QEYDNGCALILEQNLFMFASTIEAGAISSSHGDVLEMNMARNASCVGNVYYMPSTGTTYD
EECCCCEEEEEECCEEEEEHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCC
PGSYGSTNCIRHSAQSSAPISNVYHLGELIVGGNSPVGMNMRGGTILNMLFAFNKYGGTE
CCCCCCCHHHHHCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCC
YSSVNSYIAMTGPQTGDTGITTDWCNLAFFDEYRVDGTPMPIGGGTPGTVNNAVPATYYA
CCCCCCEEEEECCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEE
RPANAYRTNEEKWGIFNWDKARATPKFIEALQLLGLATGRTILDSNNDLNAEYALGALKA
CCCCCCCCCCCCCCEECCHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHH
TL
CC
>Mature Secondary Structure 
PTAEEWAVQAQASAIAASSAASGLAATLALVDDRKEAVVNMADSVESSALLATTQASTA
CCHHHHHHHHHHHHHHHHHHHCCHHEEEEHHCCHHHHHHHHHHHCCCCEEEEECCCCHH
TAQAALAIGAATNLQAEAIGARQGGTVADTGKQVLSLVGIDGGTSNLTATFARWARFRDA
HHHHHEEECCCCCCCHHEECCCCCCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCC
GSVDDETTIKTGSIVSGIALTAVVLATAAKARGRVWRRPLSSGSLNAAPGSAPDDVLLRD
CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEC
TGIVAIADDLLTMVGLSQIYLNIPVTKFEVLAGYAYGFDFEIYDASNTLLTATARYTTTA
CCEEEEHHHHHHHHCHHEEEEECCCHHEEEHEEEEECCEEEEEECCCEEEEEEEHHHHHH
ALAQRHAGFYYATTGAGSFTAQTTTRPIRMGYSTPSITSNLTDLEKKAERKLAATANSSK
HHHHHCCCEEEEECCCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCH
LTDLERLAISRQGAWSGPNKIIRPNYPSYRHGLARLGLTDGAYGVDYGPRIALADMTEMT
HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHH
AVTGVNLGSSGQIRFESGSANSPKGAVYSGLKQVGSRGIYQPTANWARLFLTDCYMNGQT
HHEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHEEEEHHEECCCC
TVGKPVDIQQVGDSGVTKFPYVELEYCDFRYFSAGMGNLYNGAIRKSLILHSGANTLQIQ
CCCCCCCHHHCCCCCCCCCCEEEEEECCEEEECCCCCHHHHHHHHHHHEEECCCCEEEEE
QEYDNGCALILEQNLFMFASTIEAGAISSSHGDVLEMNMARNASCVGNVYYMPSTGTTYD
EECCCCEEEEEECCEEEEEHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCC
PGSYGSTNCIRHSAQSSAPISNVYHLGELIVGGNSPVGMNMRGGTILNMLFAFNKYGGTE
CCCCCCCHHHHHCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCC
YSSVNSYIAMTGPQTGDTGITTDWCNLAFFDEYRVDGTPMPIGGGTPGTVNNAVPATYYA
CCCCCCEEEEECCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEE
RPANAYRTNEEKWGIFNWDKARATPKFIEALQLLGLATGRTILDSNNDLNAEYALGALKA
CCCCCCCCCCCCCCEECCHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHH
TL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA