Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198681
Identifier: 87198681
GI number: 87198681
Start: 692812
End: 693273
Strand: Direct
Name: 87198681
Synonym: Saro_0657
Alternate gene names: NA
Gene position: 692812-693273 (Clockwise)
Preceding gene: 87198680
Following gene: 87198682
Centisome position: 19.45
GC content: 62.99
Gene sequence:
>462_bases ATGAGCATCTTCGCGACGGCGGGGTCGACCATTTCGTTGTCCGCAGGCGTCCCCGCAACCTTCAACACCGCGGGTTATAG CGCGCTGACCTACACGATTGTCGGTGAAGTTACCGATCTGGGCGAATTCGGCCGCGAGTACGCGCTGATCACGCACAACC CGATCGGCAGCCGTGGCACCGTCAAGAAGAAGGGCAGCTTCAACGAGGGGCAGCTGACGGTCCAGATGGCGCTGGACACT GACGATGCCGGCCAGATCCTGGCAAAGGCAGCCGAGCTTTCGGACAATCCGTACGCAGTGAAGATCGCTCTGGCGTCTGG CGATGCTTACTACGCGCAGGCGCTGGTCATGTCCTTCAAGGTGACGGGCGGCGGCGTCGATACGATCACCAGCGCGACGA TGGTGCTCGAGCTGACCACCAGCACGGGTGGCGTTGGCATCGTCGAGGCCCTCGCGGCCTGA
Upstream 100 bases:
>100_bases GCCGCGGAATAGCAGCAACAAGATCAGCCAGGGCCATCAGGCTGCTGGCGATGCCCCGCCCGCGATTTTCGCGGGCTTTT TCATGCAGGAGTAAAGAGAC
Downstream 100 bases:
>100_bases TTTTGCTTCCTCCCCGGCCAGCCATCCTGGCCTCCTATGTTCCGGTTCGCCGCAGTCACGGATGCGGCGGGCCGGGGCGC CCTTTCCGTGAAAAGGACAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MSIFATAGSTISLSAGVPATFNTAGYSALTYTIVGEVTDLGEFGREYALITHNPIGSRGTVKKKGSFNEGQLTVQMALDT DDAGQILAKAAELSDNPYAVKIALASGDAYYAQALVMSFKVTGGGVDTITSATMVLELTTSTGGVGIVEALAA
Sequences:
>Translated_153_residues MSIFATAGSTISLSAGVPATFNTAGYSALTYTIVGEVTDLGEFGREYALITHNPIGSRGTVKKKGSFNEGQLTVQMALDT DDAGQILAKAAELSDNPYAVKIALASGDAYYAQALVMSFKVTGGGVDTITSATMVLELTTSTGGVGIVEALAA >Mature_152_residues SIFATAGSTISLSAGVPATFNTAGYSALTYTIVGEVTDLGEFGREYALITHNPIGSRGTVKKKGSFNEGQLTVQMALDTD DAGQILAKAAELSDNPYAVKIALASGDAYYAQALVMSFKVTGGGVDTITSATMVLELTTSTGGVGIVEALAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15581; Mature: 15450
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFATAGSTISLSAGVPATFNTAGYSALTYTIVGEVTDLGEFGREYALITHNPIGSRGT CEEEECCCCEEEEECCCCEEECCCCCCEEEEEEEECCHHHHHCCCEEEEEECCCCCCCCC VKKKGSFNEGQLTVQMALDTDDAGQILAKAAELSDNPYAVKIALASGDAYYAQALVMSFK EECCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEECCCHHHHEEEEEEEE VTGGGVDTITSATMVLELTTSTGGVGIVEALAA ECCCCCHHHCEEEEEEEEECCCCCHHHHHHHCC >Mature Secondary Structure SIFATAGSTISLSAGVPATFNTAGYSALTYTIVGEVTDLGEFGREYALITHNPIGSRGT EEEECCCCEEEEECCCCEEECCCCCCEEEEEEEECCHHHHHCCCEEEEEECCCCCCCCC VKKKGSFNEGQLTVQMALDTDDAGQILAKAAELSDNPYAVKIALASGDAYYAQALVMSFK EECCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEECCCHHHHEEEEEEEE VTGGGVDTITSATMVLELTTSTGGVGIVEALAA ECCCCCHHHCEEEEEEEEECCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA