Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87198672

Identifier: 87198672

GI number: 87198672

Start: 687663

End: 688358

Strand: Direct

Name: 87198672

Synonym: Saro_0648

Alternate gene names: NA

Gene position: 687663-688358 (Clockwise)

Preceding gene: 87198671

Following gene: 87198673

Centisome position: 19.31

GC content: 61.93

Gene sequence:

>696_bases
ATGCAGCGTAAGAGCGGCGGGCTGAAGCTCCGCGATTTTCACCTGAGCGTGAAGGCGCAGGATATCGGCGACGATGGCAG
CTTTACCGGGTACGGTTCCGTGTTCGGCGTTGTCGACAGCTATCAGGAAGTCGTCGCGAAGGGCGCCTTCACTGCGAGCC
TCGCCGAACTTTCCTCGAAGAACCGCAAGGTTCCGGTGCTGTGGCAACACAGACAGTCGGAGCCGATCGGGGTGTACGAC
ATGCTCGAGGAGGACGATCTCGGGCTGAAGGTCGCAGGCAAGCTCCTTGTGAACGACGTCAACCAGGCGAAGGAGTCGTT
GGCGCTGATGAAGGCAGGCGCCGTGACCGGCCTGTCGATCGGCTATTTCGTCCGCAAGTCGTCCTACGACGAGAAGACCG
GCATCCGCACCCTTCTTGAACTGGATCTGGTCGAGGTCAGCCTCGTGACCTTCCCGGCCAATGATGAGGCGCGGATCGAC
GCCGTCAAGATGAAGCTTGCCCATGGCGAGCTGCCCACTCTTCCCGAATTCGAGCGGCTCCTGCGCGAGGCAGGCTTCTC
GAAAACGAAGGCCGCCGTCGTCGCCGCGCACGGCCTTCCGCACCTGCTCCGGAGTGAGTCCGGCAGCGCAATGGCGAATG
AGGGCCTGAAGTCCCTCTCTGATGCCTTGGCAGGCCTCAAGCTGCCGACCTTTTAA

Upstream 100 bases:

>100_bases
CAGCAGCAGGACGTGCCGCTGTCCGATCAGCTCGATGCCCTCCGGGAAGCAATCAAGAACGCCCAGGACGTGGCCGGGCT
GTTCCAGAAGGGAAACGCCA

Downstream 100 bases:

>100_bases
CGGAGACAATTCATGAAGAAGAACCTGATTGCTGCGGCCCTTGTGGTCGCGGTATCGCTGGTGCTCGCTCCGAGCGCCGC
CTTTGCTGCCACTTTCGCGC

Product: prohead peptidase

Products: NA

Alternate protein names: HK97 Family Phage Prohead Protease; Peptidase; Prohead Peptidase; Caudovirus Prohead Protease; HK97 Family Phage Capsid Protein; Head Maturation Protease; Phage Prohead Protease And Phage Capsid Protein; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Phage Protease; Prohead Protease; Phage Pro-Head Protease

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MQRKSGGLKLRDFHLSVKAQDIGDDGSFTGYGSVFGVVDSYQEVVAKGAFTASLAELSSKNRKVPVLWQHRQSEPIGVYD
MLEEDDLGLKVAGKLLVNDVNQAKESLALMKAGAVTGLSIGYFVRKSSYDEKTGIRTLLELDLVEVSLVTFPANDEARID
AVKMKLAHGELPTLPEFERLLREAGFSKTKAAVVAAHGLPHLLRSESGSAMANEGLKSLSDALAGLKLPTF

Sequences:

>Translated_231_residues
MQRKSGGLKLRDFHLSVKAQDIGDDGSFTGYGSVFGVVDSYQEVVAKGAFTASLAELSSKNRKVPVLWQHRQSEPIGVYD
MLEEDDLGLKVAGKLLVNDVNQAKESLALMKAGAVTGLSIGYFVRKSSYDEKTGIRTLLELDLVEVSLVTFPANDEARID
AVKMKLAHGELPTLPEFERLLREAGFSKTKAAVVAAHGLPHLLRSESGSAMANEGLKSLSDALAGLKLPTF
>Mature_231_residues
MQRKSGGLKLRDFHLSVKAQDIGDDGSFTGYGSVFGVVDSYQEVVAKGAFTASLAELSSKNRKVPVLWQHRQSEPIGVYD
MLEEDDLGLKVAGKLLVNDVNQAKESLALMKAGAVTGLSIGYFVRKSSYDEKTGIRTLLELDLVEVSLVTFPANDEARID
AVKMKLAHGELPTLPEFERLLREAGFSKTKAAVVAAHGLPHLLRSESGSAMANEGLKSLSDALAGLKLPTF

Specific function: Unknown

COG id: COG3740

COG function: function code R; Phage head maturation protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24906; Mature: 24906

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRKSGGLKLRDFHLSVKAQDIGDDGSFTGYGSVFGVVDSYQEVVAKGAFTASLAELSSK
CCCCCCCCEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
NRKVPVLWQHRQSEPIGVYDMLEEDDLGLKVAGKLLVNDVNQAKESLALMKAGAVTGLSI
CCCCCEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHH
GYFVRKSSYDEKTGIRTLLELDLVEVSLVTFPANDEARIDAVKMKLAHGELPTLPEFERL
HHEEECCCCCHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHEEEECCCCCCCCHHHHHH
LREAGFSKTKAAVVAAHGLPHLLRSESGSAMANEGLKSLSDALAGLKLPTF
HHHCCCCHHHHHEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQRKSGGLKLRDFHLSVKAQDIGDDGSFTGYGSVFGVVDSYQEVVAKGAFTASLAELSSK
CCCCCCCCEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
NRKVPVLWQHRQSEPIGVYDMLEEDDLGLKVAGKLLVNDVNQAKESLALMKAGAVTGLSI
CCCCCEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHH
GYFVRKSSYDEKTGIRTLLELDLVEVSLVTFPANDEARIDAVKMKLAHGELPTLPEFERL
HHEEECCCCCHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHEEEECCCCCCCCHHHHHH
LREAGFSKTKAAVVAAHGLPHLLRSESGSAMANEGLKSLSDALAGLKLPTF
HHHCCCCHHHHHEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA