Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198672
Identifier: 87198672
GI number: 87198672
Start: 687663
End: 688358
Strand: Direct
Name: 87198672
Synonym: Saro_0648
Alternate gene names: NA
Gene position: 687663-688358 (Clockwise)
Preceding gene: 87198671
Following gene: 87198673
Centisome position: 19.31
GC content: 61.93
Gene sequence:
>696_bases ATGCAGCGTAAGAGCGGCGGGCTGAAGCTCCGCGATTTTCACCTGAGCGTGAAGGCGCAGGATATCGGCGACGATGGCAG CTTTACCGGGTACGGTTCCGTGTTCGGCGTTGTCGACAGCTATCAGGAAGTCGTCGCGAAGGGCGCCTTCACTGCGAGCC TCGCCGAACTTTCCTCGAAGAACCGCAAGGTTCCGGTGCTGTGGCAACACAGACAGTCGGAGCCGATCGGGGTGTACGAC ATGCTCGAGGAGGACGATCTCGGGCTGAAGGTCGCAGGCAAGCTCCTTGTGAACGACGTCAACCAGGCGAAGGAGTCGTT GGCGCTGATGAAGGCAGGCGCCGTGACCGGCCTGTCGATCGGCTATTTCGTCCGCAAGTCGTCCTACGACGAGAAGACCG GCATCCGCACCCTTCTTGAACTGGATCTGGTCGAGGTCAGCCTCGTGACCTTCCCGGCCAATGATGAGGCGCGGATCGAC GCCGTCAAGATGAAGCTTGCCCATGGCGAGCTGCCCACTCTTCCCGAATTCGAGCGGCTCCTGCGCGAGGCAGGCTTCTC GAAAACGAAGGCCGCCGTCGTCGCCGCGCACGGCCTTCCGCACCTGCTCCGGAGTGAGTCCGGCAGCGCAATGGCGAATG AGGGCCTGAAGTCCCTCTCTGATGCCTTGGCAGGCCTCAAGCTGCCGACCTTTTAA
Upstream 100 bases:
>100_bases CAGCAGCAGGACGTGCCGCTGTCCGATCAGCTCGATGCCCTCCGGGAAGCAATCAAGAACGCCCAGGACGTGGCCGGGCT GTTCCAGAAGGGAAACGCCA
Downstream 100 bases:
>100_bases CGGAGACAATTCATGAAGAAGAACCTGATTGCTGCGGCCCTTGTGGTCGCGGTATCGCTGGTGCTCGCTCCGAGCGCCGC CTTTGCTGCCACTTTCGCGC
Product: prohead peptidase
Products: NA
Alternate protein names: HK97 Family Phage Prohead Protease; Peptidase; Prohead Peptidase; Caudovirus Prohead Protease; HK97 Family Phage Capsid Protein; Head Maturation Protease; Phage Prohead Protease And Phage Capsid Protein; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Phage Protease; Prohead Protease; Phage Pro-Head Protease
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MQRKSGGLKLRDFHLSVKAQDIGDDGSFTGYGSVFGVVDSYQEVVAKGAFTASLAELSSKNRKVPVLWQHRQSEPIGVYD MLEEDDLGLKVAGKLLVNDVNQAKESLALMKAGAVTGLSIGYFVRKSSYDEKTGIRTLLELDLVEVSLVTFPANDEARID AVKMKLAHGELPTLPEFERLLREAGFSKTKAAVVAAHGLPHLLRSESGSAMANEGLKSLSDALAGLKLPTF
Sequences:
>Translated_231_residues MQRKSGGLKLRDFHLSVKAQDIGDDGSFTGYGSVFGVVDSYQEVVAKGAFTASLAELSSKNRKVPVLWQHRQSEPIGVYD MLEEDDLGLKVAGKLLVNDVNQAKESLALMKAGAVTGLSIGYFVRKSSYDEKTGIRTLLELDLVEVSLVTFPANDEARID AVKMKLAHGELPTLPEFERLLREAGFSKTKAAVVAAHGLPHLLRSESGSAMANEGLKSLSDALAGLKLPTF >Mature_231_residues MQRKSGGLKLRDFHLSVKAQDIGDDGSFTGYGSVFGVVDSYQEVVAKGAFTASLAELSSKNRKVPVLWQHRQSEPIGVYD MLEEDDLGLKVAGKLLVNDVNQAKESLALMKAGAVTGLSIGYFVRKSSYDEKTGIRTLLELDLVEVSLVTFPANDEARID AVKMKLAHGELPTLPEFERLLREAGFSKTKAAVVAAHGLPHLLRSESGSAMANEGLKSLSDALAGLKLPTF
Specific function: Unknown
COG id: COG3740
COG function: function code R; Phage head maturation protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24906; Mature: 24906
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRKSGGLKLRDFHLSVKAQDIGDDGSFTGYGSVFGVVDSYQEVVAKGAFTASLAELSSK CCCCCCCCEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHC NRKVPVLWQHRQSEPIGVYDMLEEDDLGLKVAGKLLVNDVNQAKESLALMKAGAVTGLSI CCCCCEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHH GYFVRKSSYDEKTGIRTLLELDLVEVSLVTFPANDEARIDAVKMKLAHGELPTLPEFERL HHEEECCCCCHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHEEEECCCCCCCCHHHHHH LREAGFSKTKAAVVAAHGLPHLLRSESGSAMANEGLKSLSDALAGLKLPTF HHHCCCCHHHHHEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQRKSGGLKLRDFHLSVKAQDIGDDGSFTGYGSVFGVVDSYQEVVAKGAFTASLAELSSK CCCCCCCCEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHC NRKVPVLWQHRQSEPIGVYDMLEEDDLGLKVAGKLLVNDVNQAKESLALMKAGAVTGLSI CCCCCEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHH GYFVRKSSYDEKTGIRTLLELDLVEVSLVTFPANDEARIDAVKMKLAHGELPTLPEFERL HHEEECCCCCHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHEEEECCCCCCCCHHHHHH LREAGFSKTKAAVVAAHGLPHLLRSESGSAMANEGLKSLSDALAGLKLPTF HHHCCCCHHHHHEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA