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The map label for this gene is ymfN [C]

Identifier: 87198670

GI number: 87198670

Start: 684636

End: 686372

Strand: Direct

Name: ymfN [C]

Synonym: Saro_0646

Alternate gene names: 87198670

Gene position: 684636-686372 (Clockwise)

Preceding gene: 87198669

Following gene: 87198671

Centisome position: 19.22

GC content: 62.18

Gene sequence:

>1737_bases
ATGGCGCGGCCAGTGTGGTCGACTGCCTGCCAGGATTGGCGGGAGCGCATCGTGGCGCGCGAGAGCATCGCGCCATGCGG
GCCGCTGTTCCCGGCGAAAGCCGCGGATGCGTTGGGGGTGTTCAAGTCACTGCAGGTCACCGACCTGCCTAAAAGGGAGA
ATGGGACCCACCCGACGTTGGGTGAAGTCTGCGACCAGTTCGTTTTTGACCTGGTTGCGGCCATCTTCGGCGCCGAGGAT
CCGGAAACTGGCGAGCGGTTGATCAAGGAGTTCATGCTCCTGATCAGCAAGAAGAATGGCAAGTCGATGATCGCAGCGGG
CATCATGGTGACCGCGTTGATCCTCAACTGGCGTCCGAACGCGATCCTGCAGATCCTTGCGCCCACGATCGAGGTTGCGA
ACAACAGCTTTGAGCCTGCCATGGGGATGGTAAGAGCGGACGCCGAGCTGGCGATTGTCCTGAAGGTTGTCGAGCATCAG
CGACAGATCAAGCACCTGACGACGGGTGCGGTATTGCGGGTCATTGCCGCCGACAGCGATACCGTAGCTGGCGGCAAGGC
GGCGATGACGTTGATCGAAGAGCTCTGGCTCTTCGGGAAGAAGGCCAAGGCAGCCGCGATGTTGCGAGAGGCGCTGGGTG
GCGGATCGGCAAGGCCGGAAGGCTTTACGCTCTACATCACGACCCATTCGGACGAACCACCGGCGGGCGTGTTCAAGACC
AAGCTGTCGTACTTCCGCGATGTGAGGGATGGTGAGATCGAGGATCCTGCTACCTTCCCGATGCTGTACGAGTGGCCGGA
AGACCTGTTGGAGTGCGAGTCCTACCTCGATCCAGAGTTCTTCTACGTCACGAATCCACACGTTGGCCGATCGGTCTCGA
TTGAATGGCTCAAGTCGGAACTGCAGAAGGAACAGATCGGCGAAGGTGAAGGCCTTCAGATCTTCCTGGCGAAGCATCTG
AACGTCGAGATTGGTTTGCGGTTGCGGCGCGATCGTTGGGGCGGTGCTGAGCTTTGGCTCGATGCAGCGAATGATGACCT
TGATCTCGACCAGCTGCTTGAGCGCTGCGAAGTGGCGATCGTTGGGCTCGACATGGGCGGCCGGGACGACTTGGCCGGTG
CCGGCGTGGTCGGTCGCGAAAAGGGAACGGGTATATGGCTGGGCTGGGCGCATGCCTGGGCGCAGCGGGTTGCGCTGGAG
CGGCGCAAGCAGGTGGCGCCGACGCTGCAAGGCTTTGCGGCTGAAGGCGACCTGACCTTCACCGATTCCGGTGAGGAAAT
CGTGAGCGCCATGGCGCGCCTTGCAATTCGGGTCCGCGACAGCGGCAAGATGCCTGCGGATGGCGGGGTTGCGGTCGATG
CCTGGGGCATCGGTCCACTCGTCGATGCGCTGGTGCAGGCCGGGTTCGATCCTGGCGACGAGGCAATGAAGCGCGCGGGG
CATATCGCCTCGATCAGGCAGGGTGTTGGCCTGTCGAGCGCGATCTACACGCTGGAATTCAAGCTCGGCGACGGGATGTT
CCGTCACGACGGTTCGAACATGATGGCCTGGTGCGTGAGCAACGCGCTGGTCAAGCTCAGGGGCAGTGCCTTGTACGTCG
ACAAAGAGACATCAGGCGCGGGCAAGATCGACCCGTTCGTGGCGCTGCTCAATGCAGTGAAGCGTATGGAAGAGGGCCCG
GTGGCCGTGGCTGGCGGCGTCGATAGCTGGCTCGCCAGCTTGCGTGGTGCGGCGTGA

Upstream 100 bases:

>100_bases
AAGCTGGGCAAGAAGGATCAGGCCAAGCTGGCGGCGCACGAGATGGGTGGCAAGTTCGGGGCACGTACCCCGCCGCCGCG
CCTGATCAACTGAGGTTGGT

Downstream 100 bases:

>100_bases
GCAGTCTGGCCCCGCGAACGTCCTGGCTCGCGAAGGCGACGACGGCGCTGCGCGACTGGCTGGTGCTCGGACCGGATCCG
AAGATCCGCGACCCACAGAA

Product: phage terminase

Products: NA

Alternate protein names: Terminase; Phage Terminase Large Subunit; Phage Terminase-Like Protein Large Subunit; Phage Terminase Family Protein

Number of amino acids: Translated: 578; Mature: 577

Protein sequence:

>578_residues
MARPVWSTACQDWRERIVARESIAPCGPLFPAKAADALGVFKSLQVTDLPKRENGTHPTLGEVCDQFVFDLVAAIFGAED
PETGERLIKEFMLLISKKNGKSMIAAGIMVTALILNWRPNAILQILAPTIEVANNSFEPAMGMVRADAELAIVLKVVEHQ
RQIKHLTTGAVLRVIAADSDTVAGGKAAMTLIEELWLFGKKAKAAAMLREALGGGSARPEGFTLYITTHSDEPPAGVFKT
KLSYFRDVRDGEIEDPATFPMLYEWPEDLLECESYLDPEFFYVTNPHVGRSVSIEWLKSELQKEQIGEGEGLQIFLAKHL
NVEIGLRLRRDRWGGAELWLDAANDDLDLDQLLERCEVAIVGLDMGGRDDLAGAGVVGREKGTGIWLGWAHAWAQRVALE
RRKQVAPTLQGFAAEGDLTFTDSGEEIVSAMARLAIRVRDSGKMPADGGVAVDAWGIGPLVDALVQAGFDPGDEAMKRAG
HIASIRQGVGLSSAIYTLEFKLGDGMFRHDGSNMMAWCVSNALVKLRGSALYVDKETSGAGKIDPFVALLNAVKRMEEGP
VAVAGGVDSWLASLRGAA

Sequences:

>Translated_578_residues
MARPVWSTACQDWRERIVARESIAPCGPLFPAKAADALGVFKSLQVTDLPKRENGTHPTLGEVCDQFVFDLVAAIFGAED
PETGERLIKEFMLLISKKNGKSMIAAGIMVTALILNWRPNAILQILAPTIEVANNSFEPAMGMVRADAELAIVLKVVEHQ
RQIKHLTTGAVLRVIAADSDTVAGGKAAMTLIEELWLFGKKAKAAAMLREALGGGSARPEGFTLYITTHSDEPPAGVFKT
KLSYFRDVRDGEIEDPATFPMLYEWPEDLLECESYLDPEFFYVTNPHVGRSVSIEWLKSELQKEQIGEGEGLQIFLAKHL
NVEIGLRLRRDRWGGAELWLDAANDDLDLDQLLERCEVAIVGLDMGGRDDLAGAGVVGREKGTGIWLGWAHAWAQRVALE
RRKQVAPTLQGFAAEGDLTFTDSGEEIVSAMARLAIRVRDSGKMPADGGVAVDAWGIGPLVDALVQAGFDPGDEAMKRAG
HIASIRQGVGLSSAIYTLEFKLGDGMFRHDGSNMMAWCVSNALVKLRGSALYVDKETSGAGKIDPFVALLNAVKRMEEGP
VAVAGGVDSWLASLRGAA
>Mature_577_residues
ARPVWSTACQDWRERIVARESIAPCGPLFPAKAADALGVFKSLQVTDLPKRENGTHPTLGEVCDQFVFDLVAAIFGAEDP
ETGERLIKEFMLLISKKNGKSMIAAGIMVTALILNWRPNAILQILAPTIEVANNSFEPAMGMVRADAELAIVLKVVEHQR
QIKHLTTGAVLRVIAADSDTVAGGKAAMTLIEELWLFGKKAKAAAMLREALGGGSARPEGFTLYITTHSDEPPAGVFKTK
LSYFRDVRDGEIEDPATFPMLYEWPEDLLECESYLDPEFFYVTNPHVGRSVSIEWLKSELQKEQIGEGEGLQIFLAKHLN
VEIGLRLRRDRWGGAELWLDAANDDLDLDQLLERCEVAIVGLDMGGRDDLAGAGVVGREKGTGIWLGWAHAWAQRVALER
RKQVAPTLQGFAAEGDLTFTDSGEEIVSAMARLAIRVRDSGKMPADGGVAVDAWGIGPLVDALVQAGFDPGDEAMKRAGH
IASIRQGVGLSSAIYTLEFKLGDGMFRHDGSNMMAWCVSNALVKLRGSALYVDKETSGAGKIDPFVALLNAVKRMEEGPV
AVAGGVDSWLASLRGAA

Specific function: Unknown

COG id: COG4626

COG function: function code R; Phage terminase-like protein, large subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62608; Mature: 62477

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPVWSTACQDWRERIVARESIAPCGPLFPAKAADALGVFKSLQVTDLPKRENGTHPTL
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCH
GEVCDQFVFDLVAAIFGAEDPETGERLIKEFMLLISKKNGKSMIAAGIMVTALILNWRPN
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCH
AILQILAPTIEVANNSFEPAMGMVRADAELAIVLKVVEHQRQIKHLTTGAVLRVIAADSD
HHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
TVAGGKAAMTLIEELWLFGKKAKAAAMLREALGGGSARPEGFTLYITTHSDEPPAGVFKT
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHH
KLSYFRDVRDGEIEDPATFPMLYEWPEDLLECESYLDPEFFYVTNPHVGRSVSIEWLKSE
HHHHHHHCCCCCCCCCCCCCHHHHCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHH
LQKEQIGEGEGLQIFLAKHLNVEIGLRLRRDRWGGAELWLDAANDDLDLDQLLERCEVAI
HHHHHCCCCCCEEEEEEECCCEEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHCCEEE
VGLDMGGRDDLAGAGVVGREKGTGIWLGWAHAWAQRVALERRKQVAPTLQGFAAEGDLTF
EEECCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
TDSGEEIVSAMARLAIRVRDSGKMPADGGVAVDAWGIGPLVDALVQAGFDPGDEAMKRAG
CCCHHHHHHHHHHHEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCHHHHHHCC
HIASIRQGVGLSSAIYTLEFKLGDGMFRHDGSNMMAWCVSNALVKLRGSALYVDKETSGA
HHHHHHHCCCCCEEEEEEEEEECCCEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCC
GKIDPFVALLNAVKRMEEGPVAVAGGVDSWLASLRGAA
CCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCC
>Mature Secondary Structure 
ARPVWSTACQDWRERIVARESIAPCGPLFPAKAADALGVFKSLQVTDLPKRENGTHPTL
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCH
GEVCDQFVFDLVAAIFGAEDPETGERLIKEFMLLISKKNGKSMIAAGIMVTALILNWRPN
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCH
AILQILAPTIEVANNSFEPAMGMVRADAELAIVLKVVEHQRQIKHLTTGAVLRVIAADSD
HHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
TVAGGKAAMTLIEELWLFGKKAKAAAMLREALGGGSARPEGFTLYITTHSDEPPAGVFKT
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHH
KLSYFRDVRDGEIEDPATFPMLYEWPEDLLECESYLDPEFFYVTNPHVGRSVSIEWLKSE
HHHHHHHCCCCCCCCCCCCCHHHHCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHH
LQKEQIGEGEGLQIFLAKHLNVEIGLRLRRDRWGGAELWLDAANDDLDLDQLLERCEVAI
HHHHHCCCCCCEEEEEEECCCEEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHCCEEE
VGLDMGGRDDLAGAGVVGREKGTGIWLGWAHAWAQRVALERRKQVAPTLQGFAAEGDLTF
EEECCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
TDSGEEIVSAMARLAIRVRDSGKMPADGGVAVDAWGIGPLVDALVQAGFDPGDEAMKRAG
CCCHHHHHHHHHHHEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCHHHHHHCC
HIASIRQGVGLSSAIYTLEFKLGDGMFRHDGSNMMAWCVSNALVKLRGSALYVDKETSGA
HHHHHHHCCCCCEEEEEEEEEECCCEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCC
GKIDPFVALLNAVKRMEEGPVAVAGGVDSWLASLRGAA
CCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA