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The map label for this gene is 87198554

Identifier: 87198554

GI number: 87198554

Start: 573909

End: 575255

Strand: Direct

Name: 87198554

Synonym: Saro_0530

Alternate gene names: NA

Gene position: 573909-575255 (Clockwise)

Preceding gene: 87198552

Following gene: 87198558

Centisome position: 16.11

GC content: 63.18

Gene sequence:

>1347_bases
ATGGCGCGAACGGGAATGTATGTACTTCAGGGTGTCGATCCGGCGGCAATTGCCGAGGCGCCCTTCGACGTGAAGGTCGT
CGACATCTACAACGACAGCGGGGCGATGTTCACGCCCACCCAGGTTGCCCAGATGGGTGGCGGGCCGGGTTCCGCACTCT
TGCTCGGTTACTTCAGCATCGGCGAGGCGGAAGTCTACCGGGACTATTTCAGCAGCATTCCCAAGTCCGCGCTCGGGCCG
GAAAACCCGCAGTGGAAGGGCAACTACGAGGTTGCCTTCTGGACCCAGGAATGGCGCACAGTCGCCACCACCTACCTCGA
TAAGGTGATCGCCGCCGGCTACGACGGGATCTACTTCGACGTGGTGGACGAGTACCAGCAGGCCTGGGCCCAAGCCAACT
GCCCGGGCGGTGCGGCCGGTGCAGAGCAGGCGATGGCCGACCTTGTAGCCTATCTGGCCGACTATGCCCATGCCAAGAAC
CCCGCGTTCAAGATCTGGGCAAACAACGCCGAGGAACTGCTGACCAACCAGACATATTTCAGCCACCTCGACGGCATGTT
CAAGGAGAACCTGTTCTACACCGATTCGGGCTCGGCTCAGCCCAAGTCCGAGACCAGCTACAGCCTGCAAATGATGCAAA
GCATGCTGGCGGCGGGCAAGGACGTGATCGCGATCGAATATGTCTCAGACCCGGCCAAGGTCACGGACGTCGAGGCCAAG
GCCGCGGCGGCGGGCGTGGGCTACTACACCGCCGACATCGACCTCAACGGGATCAGCTATACCGGCGTGCTGCCGGGGCA
GGTGATCCACGAGGACTGGAGCGGCTTGACCCCGACGACCACGACCACAACGACGACGACCGCGCCCCCGCCGGCCGACC
TCGTGTTGAACGGCACGAGCTATGCCGATACGCTGACCGGGCAAGGCGGCAACGACAAGCTCTTCGGTTTTGCGGGCAAG
GACGTGCTGGCCGGCAACGGCGGCAATGACTGGCTCGAGGGTGGTAATGGCAACGACCGGCTCACCGGTGGTGCCGGAGC
GGATTCGTTCGTGTTCCGGGCCAGCGGATCCAAGCATATGGATACGATCACGGATTTCCAGCCGGGCATCGACCATATCG
TGCTCGACCGCGCCGTGTTCACGAAGGTCGGCGCGGCGGGTGCGCTGGCAGATGCCGCTTTCTGGGAAGGCTCGAAGGCG
CACGATGCGAGCGACCGGATCACCTACGATTCGGTGACCGGCACGATTAGCTACGACAGCGACGGGACCGGCTGGCACAG
CGCGGTTGTCGTCGCGACGTTGGCGCCTGGTCTCCACCTGACCGCCAGCGATTTCATTGTAATCTGA

Upstream 100 bases:

>100_bases
ATCAATCACATAACCGCAGGGCACCCAGTGACTTGGATGCTCTCAGCGATGGCGCGCGCGGGCCGTCCGCGTGCTGCCTT
CCAATCAGGAGCACACTTTA

Downstream 100 bases:

>100_bases
TCCGTCATCGGAATCCCGCTCCACGGTGCAAGGCCGTGGGGCGGGGCTTCAGGCAGCGAGCAGGCGCTTCACGCCCCAAC
CATCAGCCAGTCGGCGCAAG

Product: hypothetical protein

Products: AMP; diphosphate; L-cysteinyl-tRNA(Cys)

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MARTGMYVLQGVDPAAIAEAPFDVKVVDIYNDSGAMFTPTQVAQMGGGPGSALLLGYFSIGEAEVYRDYFSSIPKSALGP
ENPQWKGNYEVAFWTQEWRTVATTYLDKVIAAGYDGIYFDVVDEYQQAWAQANCPGGAAGAEQAMADLVAYLADYAHAKN
PAFKIWANNAEELLTNQTYFSHLDGMFKENLFYTDSGSAQPKSETSYSLQMMQSMLAAGKDVIAIEYVSDPAKVTDVEAK
AAAAGVGYYTADIDLNGISYTGVLPGQVIHEDWSGLTPTTTTTTTTTAPPPADLVLNGTSYADTLTGQGGNDKLFGFAGK
DVLAGNGGNDWLEGGNGNDRLTGGAGADSFVFRASGSKHMDTITDFQPGIDHIVLDRAVFTKVGAAGALADAAFWEGSKA
HDASDRITYDSVTGTISYDSDGTGWHSAVVVATLAPGLHLTASDFIVI

Sequences:

>Translated_448_residues
MARTGMYVLQGVDPAAIAEAPFDVKVVDIYNDSGAMFTPTQVAQMGGGPGSALLLGYFSIGEAEVYRDYFSSIPKSALGP
ENPQWKGNYEVAFWTQEWRTVATTYLDKVIAAGYDGIYFDVVDEYQQAWAQANCPGGAAGAEQAMADLVAYLADYAHAKN
PAFKIWANNAEELLTNQTYFSHLDGMFKENLFYTDSGSAQPKSETSYSLQMMQSMLAAGKDVIAIEYVSDPAKVTDVEAK
AAAAGVGYYTADIDLNGISYTGVLPGQVIHEDWSGLTPTTTTTTTTTAPPPADLVLNGTSYADTLTGQGGNDKLFGFAGK
DVLAGNGGNDWLEGGNGNDRLTGGAGADSFVFRASGSKHMDTITDFQPGIDHIVLDRAVFTKVGAAGALADAAFWEGSKA
HDASDRITYDSVTGTISYDSDGTGWHSAVVVATLAPGLHLTASDFIVI
>Mature_447_residues
ARTGMYVLQGVDPAAIAEAPFDVKVVDIYNDSGAMFTPTQVAQMGGGPGSALLLGYFSIGEAEVYRDYFSSIPKSALGPE
NPQWKGNYEVAFWTQEWRTVATTYLDKVIAAGYDGIYFDVVDEYQQAWAQANCPGGAAGAEQAMADLVAYLADYAHAKNP
AFKIWANNAEELLTNQTYFSHLDGMFKENLFYTDSGSAQPKSETSYSLQMMQSMLAAGKDVIAIEYVSDPAKVTDVEAKA
AAAGVGYYTADIDLNGISYTGVLPGQVIHEDWSGLTPTTTTTTTTTAPPPADLVLNGTSYADTLTGQGGNDKLFGFAGKD
VLAGNGGNDWLEGGNGNDRLTGGAGADSFVFRASGSKHMDTITDFQPGIDHIVLDRAVFTKVGAAGALADAAFWEGSKAH
DASDRITYDSVTGTISYDSDGTGWHSAVVVATLAPGLHLTASDFIVI

Specific function: Unknown

COG id: COG2342

COG function: function code G; Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016063
- InterPro:   IPR017853
- InterPro:   IPR016062
- InterPro:   IPR004352 [H]

Pfam domain/function: PF03537 DUF297 [H]

EC number: 6.1.1.16

Molecular weight: Translated: 47395; Mature: 47263

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: PS00330 HEMOLYSIN_CALCIUM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTGMYVLQGVDPAAIAEAPFDVKVVDIYNDSGAMFTPTQVAQMGGGPGSALLLGYFSI
CCCCCEEEEECCCHHHHHCCCCCEEEEEEECCCCCEECHHHHHHCCCCCCCEEEEEEEEC
GEAEVYRDYFSSIPKSALGPENPQWKGNYEVAFWTQEWRTVATTYLDKVIAAGYDGIYFD
CHHHHHHHHHHHCCHHHCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCEEHH
VVDEYQQAWAQANCPGGAAGAEQAMADLVAYLADYAHAKNPAFKIWANNAEELLTNQTYF
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCHHH
SHLDGMFKENLFYTDSGSAQPKSETSYSLQMMQSMLAAGKDVIAIEYVSDPAKVTDVEAK
HHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCHHH
AAAAGVGYYTADIDLNGISYTGVLPGQVIHEDWSGLTPTTTTTTTTTAPPPADLVLNGTS
HHHCCCCEEEEEEEECCEEEECCCCCHHHHHCCCCCCCCCCCEEECCCCCCCCEEECCCC
YADTLTGQGGNDKLFGFAGKDVLAGNGGNDWLEGGNGNDRLTGGAGADSFVFRASGSKHM
CCHHCCCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
DTITDFQPGIDHIVLDRAVFTKVGAAGALADAAFWEGSKAHDASDRITYDSVTGTISYDS
CHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEECEEEEEEECC
DGTGWHSAVVVATLAPGLHLTASDFIVI
CCCCHHHEEEEEEECCCCEEECCCEEEC
>Mature Secondary Structure 
ARTGMYVLQGVDPAAIAEAPFDVKVVDIYNDSGAMFTPTQVAQMGGGPGSALLLGYFSI
CCCCEEEEECCCHHHHHCCCCCEEEEEEECCCCCEECHHHHHHCCCCCCCEEEEEEEEC
GEAEVYRDYFSSIPKSALGPENPQWKGNYEVAFWTQEWRTVATTYLDKVIAAGYDGIYFD
CHHHHHHHHHHHCCHHHCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCEEHH
VVDEYQQAWAQANCPGGAAGAEQAMADLVAYLADYAHAKNPAFKIWANNAEELLTNQTYF
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCHHH
SHLDGMFKENLFYTDSGSAQPKSETSYSLQMMQSMLAAGKDVIAIEYVSDPAKVTDVEAK
HHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCHHH
AAAAGVGYYTADIDLNGISYTGVLPGQVIHEDWSGLTPTTTTTTTTTAPPPADLVLNGTS
HHHCCCCEEEEEEEECCEEEECCCCCHHHHHCCCCCCCCCCCEEECCCCCCCCEEECCCC
YADTLTGQGGNDKLFGFAGKDVLAGNGGNDWLEGGNGNDRLTGGAGADSFVFRASGSKHM
CCHHCCCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
DTITDFQPGIDHIVLDRAVFTKVGAAGALADAAFWEGSKAHDASDRITYDSVTGTISYDS
CHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEECEEEEEEECC
DGTGWHSAVVVATLAPGLHLTASDFIVI
CCCCHHHEEEEEEECCCCEEECCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-cysteine; tRNA(Cys)

Specific reaction: ATP + L-cysteine + tRNA(Cys) = AMP + diphosphate + L-cysteinyl-tRNA(Cys)

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]