Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198522
Identifier: 87198522
GI number: 87198522
Start: 539046
End: 539477
Strand: Direct
Name: 87198522
Synonym: Saro_0497
Alternate gene names: NA
Gene position: 539046-539477 (Clockwise)
Preceding gene: 87198518
Following gene: 87198526
Centisome position: 15.14
GC content: 62.73
Gene sequence:
>432_bases GTGTCATACGAACAGACGGGTAGTGCTTGGCTCGGTGGTTTCGCGCACGACAACGCCAACCCGGACAATCTCAACCAACT TGCCCTGTGGTGCGAGGAACTCACCTCCGCCGAACAGCGCGCTGGTTTCGAGCGCATTCTGCGCGAAATCTCGGACCTCG CATCGGGTCGTGGCGAAGCGGCTTCGCAGTGGATTTCCCTGCTTGCGGATTCCGGCGCATTCGAAAGTGCCGCGATCGCG ATGATCCCGCAGTCGGCAATCTATACCGGCGGGCGCATGAAGGACGGATCGTTCGTCGCTCAGGTCATTCTCGATGGCGG CGTTGGCGCGCACTCGCGCAATGCGCAGAGCATTTCGATGGCCTGGCTTGCGGCGCTGCTGCGGGCTCTTGCGCGCCGCT CGGTCGAGAACCGTACCCGCAACGCTCACTGA
Upstream 100 bases:
>100_bases AAAGCGGCACCCCGTTTGGGTCTTAACGAAAGTTATAGATCGCTAATTCAAAATGATATAGTCCCACTCTGGAACGGGAT GCATTGTGGAGATTTCTCGG
Downstream 100 bases:
>100_bases TCGCTTTCCAGCGGCAGGCAGGCATGGAAAACCGGGCTTCGAGCCCGGTTTTTTGTGCGTTCAGACGGGGCGCCTTGCGA TCAGGCCTTCTCGAGCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MSYEQTGSAWLGGFAHDNANPDNLNQLALWCEELTSAEQRAGFERILREISDLASGRGEAASQWISLLADSGAFESAAIA MIPQSAIYTGGRMKDGSFVAQVILDGGVGAHSRNAQSISMAWLAALLRALARRSVENRTRNAH
Sequences:
>Translated_143_residues MSYEQTGSAWLGGFAHDNANPDNLNQLALWCEELTSAEQRAGFERILREISDLASGRGEAASQWISLLADSGAFESAAIA MIPQSAIYTGGRMKDGSFVAQVILDGGVGAHSRNAQSISMAWLAALLRALARRSVENRTRNAH >Mature_142_residues SYEQTGSAWLGGFAHDNANPDNLNQLALWCEELTSAEQRAGFERILREISDLASGRGEAASQWISLLADSGAFESAAIAM IPQSAIYTGGRMKDGSFVAQVILDGGVGAHSRNAQSISMAWLAALLRALARRSVENRTRNAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15350; Mature: 15219
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYEQTGSAWLGGFAHDNANPDNLNQLALWCEELTSAEQRAGFERILREISDLASGRGEA CCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ASQWISLLADSGAFESAAIAMIPQSAIYTGGRMKDGSFVAQVILDGGVGAHSRNAQSISM HHHHHHHHHCCCCCCHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHH AWLAALLRALARRSVENRTRNAH HHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SYEQTGSAWLGGFAHDNANPDNLNQLALWCEELTSAEQRAGFERILREISDLASGRGEA CCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ASQWISLLADSGAFESAAIAMIPQSAIYTGGRMKDGSFVAQVILDGGVGAHSRNAQSISM HHHHHHHHHCCCCCCHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHH AWLAALLRALARRSVENRTRNAH HHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA