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The map label for this gene is yaeJ [C]

Identifier: 87198473

GI number: 87198473

Start: 491021

End: 491434

Strand: Direct

Name: yaeJ [C]

Synonym: Saro_0448

Alternate gene names: 87198473

Gene position: 491021-491434 (Clockwise)

Preceding gene: 87198472

Following gene: 87198475

Centisome position: 13.79

GC content: 66.91

Gene sequence:

>414_bases
ATGTCCCCCGACGCGATCGTCGCCAAGGCGCTGTCGCTGGTGGAGGAAAGCTTCATCGCCTCTGCCGGGCCGGGCGGCCA
GAACGTCAACAAGGTGGCGACGGCAGTGCAGTTGCGGCTCGACGTCTTCGCCCTTCGCCTGTCGCCCGAGGTGTTCCACC
GCGTAAAGGCCCTGGCCGGCAGCAAGATGACCGCAAAGGGCGAGATCGTCCTCACCGCGCGCAGTTACCGCACCCAGGAA
CAGAACCGCGAGGATGCCCGCAAGCGCCTCGCCGAATTGCTGCGCGAAGCCTGCAACCTTCCGCAGAAGCGCGCCAAATC
GCGCCTCAACCGCGTCGGAAAGGTTGAGCGTCTGGCCGGCAAGAAGATCCGCGGCGCCGTGAAGGCCGGGCGCGGCAAGG
TGAGGCTGGACTAG

Upstream 100 bases:

>100_bases
GTCGTTCCGCGCGCGGGCAAGGCGCCGATCGTCGCCCACGCACCATTGCCGCTCGATTTCGACGCCTTCGGCTTCGAGCT
TCCGGATGCCGGGGCCTGAC

Downstream 100 bases:

>100_bases
GGCCGGAAAACGCCCTTTCCGTTCGACGCGAACGCGACGCGGTGGAACTCAGTCCCCGCCGACGCGCTCGATTTCGGCGC
CAAGCAGCGAGAGCTTCTCT

Product: class I peptide chain release factor domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSPDAIVAKALSLVEESFIASAGPGGQNVNKVATAVQLRLDVFALRLSPEVFHRVKALAGSKMTAKGEIVLTARSYRTQE
QNREDARKRLAELLREACNLPQKRAKSRLNRVGKVERLAGKKIRGAVKAGRGKVRLD

Sequences:

>Translated_137_residues
MSPDAIVAKALSLVEESFIASAGPGGQNVNKVATAVQLRLDVFALRLSPEVFHRVKALAGSKMTAKGEIVLTARSYRTQE
QNREDARKRLAELLREACNLPQKRAKSRLNRVGKVERLAGKKIRGAVKAGRGKVRLD
>Mature_136_residues
SPDAIVAKALSLVEESFIASAGPGGQNVNKVATAVQLRLDVFALRLSPEVFHRVKALAGSKMTAKGEIVLTARSYRTQEQ
NREDARKRLAELLREACNLPQKRAKSRLNRVGKVERLAGKKIRGAVKAGRGKVRLD

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=123, Percent_Identity=41.4634146341463, Blast_Score=81, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 14974; Mature: 14843

Theoretical pI: Translated: 11.60; Mature: 11.60

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPDAIVAKALSLVEESFIASAGPGGQNVNKVATAVQLRLDVFALRLSPEVFHRVKALAG
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
SKMTAKGEIVLTARSYRTQEQNREDARKRLAELLREACNLPQKRAKSRLNRVGKVERLAG
CCCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
KKIRGAVKAGRGKVRLD
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SPDAIVAKALSLVEESFIASAGPGGQNVNKVATAVQLRLDVFALRLSPEVFHRVKALAG
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
SKMTAKGEIVLTARSYRTQEQNREDARKRLAELLREACNLPQKRAKSRLNRVGKVERLAG
CCCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
KKIRGAVKAGRGKVRLD
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]