Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is uspG [C]
Identifier: 87198421
GI number: 87198421
Start: 433539
End: 434387
Strand: Direct
Name: uspG [C]
Synonym: Saro_0396
Alternate gene names: 87198421
Gene position: 433539-434387 (Clockwise)
Preceding gene: 87198420
Following gene: 87198422
Centisome position: 12.17
GC content: 61.96
Gene sequence:
>849_bases ATGACCACTCACGGCAAGCCGGTCCTTGTTGCGACCGATCTCAGTGCCAGAACTGACCGCGCGGTTGACCGGGCAACGCA ACTTGCAGGTGAGTGGGGCGTCCGGCTGATCGTGCTTCATGCCATCGAGCCGGATTCGCGGCTCCATGCCCGACCAGAAC TCGCGAATCAGGCAATGCGGGAAGTCCTGGCCGATCCTGAAGCCGACGTGGACATATTGCCGGCTTTGGACCTTGCCCCG ACGGCTATCGTCGAGGCCGCGAAATCTGCGGACTGCGGCCTGATTGTCACCGGCGTAGCGCGCTTCAATCACGTCGGTGA CTACTTCATCGGCACGGCGGTCGACCATGTGGTGCGGCACGCGACGGTTCCGGTACTGGTCGTCAAGCAGAGGCCGCATA ATGCCTATCGCACGATCGTGGTCGCTACCGACTACTCCAGCTGTTCGCGACTGGCTTTGCTTACTGCCGCGGAGTTCTTT CCCGATGCAGCCATCCACCTCGTCCACGCCTACCACGTCCCTTATGAGGCATGGTTGCGCTCCGATGAGGTGCGGGAGGA CGTGACGCGCGAGGCGCAGCGAGAGCTCGATGCCTTTGTTTTGGATCCCGCCATCCCCGCCAATGTGCGGCAGAGGATTT CAGCCAAGCTCGTCTACGGTGAGACCCACACCGTGCTCTCCAGCACGGCTTACGAGCTCGGCGCGGATTTGCTGGTGCTC GGCACCCATGGCTCTGGCGGGTATTTCGCGGCGGTCATGGGCCGGATGGCGGAATCGTTGCTGCGCTGTGCCGATATCGA CACATTGGTGGTCCGGGAAATCGGCTCGACTGGAAGTGAACACAGATAG
Upstream 100 bases:
>100_bases TGTCCTGGTGGGCGCCGGCGTGGACGCCGAAGTGACCCGGCGCAGGATCACCGAGCAGCGCGCCTATGAAACAGGTGACA GCCCTTGAAGGAGAGAGCAG
Downstream 100 bases:
>100_bases CCTCGTTATCGGGTTCGAGACAATGTGAACGTGCTCGGCTAGGCTACAGAAGACCTGTCAGGGAAGGGTTCAGTTTGCCC CTTAGACTTACTCATCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: UspA Domain-Containing Protein; UspA Domain Protein; Universal Stress Family Protein; Universal Stress Protein UspA; Universal Stress Protein Family; UspA Protein; Usp Universal Stress Protein; Universal Stress Family; Usp-Like Protein
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MTTHGKPVLVATDLSARTDRAVDRATQLAGEWGVRLIVLHAIEPDSRLHARPELANQAMREVLADPEADVDILPALDLAP TAIVEAAKSADCGLIVTGVARFNHVGDYFIGTAVDHVVRHATVPVLVVKQRPHNAYRTIVVATDYSSCSRLALLTAAEFF PDAAIHLVHAYHVPYEAWLRSDEVREDVTREAQRELDAFVLDPAIPANVRQRISAKLVYGETHTVLSSTAYELGADLLVL GTHGSGGYFAAVMGRMAESLLRCADIDTLVVREIGSTGSEHR
Sequences:
>Translated_282_residues MTTHGKPVLVATDLSARTDRAVDRATQLAGEWGVRLIVLHAIEPDSRLHARPELANQAMREVLADPEADVDILPALDLAP TAIVEAAKSADCGLIVTGVARFNHVGDYFIGTAVDHVVRHATVPVLVVKQRPHNAYRTIVVATDYSSCSRLALLTAAEFF PDAAIHLVHAYHVPYEAWLRSDEVREDVTREAQRELDAFVLDPAIPANVRQRISAKLVYGETHTVLSSTAYELGADLLVL GTHGSGGYFAAVMGRMAESLLRCADIDTLVVREIGSTGSEHR >Mature_281_residues TTHGKPVLVATDLSARTDRAVDRATQLAGEWGVRLIVLHAIEPDSRLHARPELANQAMREVLADPEADVDILPALDLAPT AIVEAAKSADCGLIVTGVARFNHVGDYFIGTAVDHVVRHATVPVLVVKQRPHNAYRTIVVATDYSSCSRLALLTAAEFFP DAAIHLVHAYHVPYEAWLRSDEVREDVTREAQRELDAFVLDPAIPANVRQRISAKLVYGETHTVLSSTAYELGADLLVLG THGSGGYFAAVMGRMAESLLRCADIDTLVVREIGSTGSEHR
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 120 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30612; Mature: 30481
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHGKPVLVATDLSARTDRAVDRATQLAGEWGVRLIVLHAIEPDSRLHARPELANQAMR CCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHHH EVLADPEADVDILPALDLAPTAIVEAAKSADCGLIVTGVARFNHVGDYFIGTAVDHVVRH HHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHCCHHHHHHHHHHHHHH ATVPVLVVKQRPHNAYRTIVVATDYSSCSRLALLTAAEFFPDAAIHLVHAYHVPYEAWLR CCCCEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHC SDEVREDVTREAQRELDAFVLDPAIPANVRQRISAKLVYGETHTVLSSTAYELGADLLVL CHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHEEEEECCHHHHHHHHHHHCCCCEEEE GTHGSGGYFAAVMGRMAESLLRCADIDTLVVREIGSTGSEHR EECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC >Mature Secondary Structure TTHGKPVLVATDLSARTDRAVDRATQLAGEWGVRLIVLHAIEPDSRLHARPELANQAMR CCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHHH EVLADPEADVDILPALDLAPTAIVEAAKSADCGLIVTGVARFNHVGDYFIGTAVDHVVRH HHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHCCHHHHHHHHHHHHHH ATVPVLVVKQRPHNAYRTIVVATDYSSCSRLALLTAAEFFPDAAIHLVHAYHVPYEAWLR CCCCEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHC SDEVREDVTREAQRELDAFVLDPAIPANVRQRISAKLVYGETHTVLSSTAYELGADLLVL CHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHEEEEECCHHHHHHHHHHHCCCCEEEE GTHGSGGYFAAVMGRMAESLLRCADIDTLVVREIGSTGSEHR EECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA