Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is uspG [C]

Identifier: 87198421

GI number: 87198421

Start: 433539

End: 434387

Strand: Direct

Name: uspG [C]

Synonym: Saro_0396

Alternate gene names: 87198421

Gene position: 433539-434387 (Clockwise)

Preceding gene: 87198420

Following gene: 87198422

Centisome position: 12.17

GC content: 61.96

Gene sequence:

>849_bases
ATGACCACTCACGGCAAGCCGGTCCTTGTTGCGACCGATCTCAGTGCCAGAACTGACCGCGCGGTTGACCGGGCAACGCA
ACTTGCAGGTGAGTGGGGCGTCCGGCTGATCGTGCTTCATGCCATCGAGCCGGATTCGCGGCTCCATGCCCGACCAGAAC
TCGCGAATCAGGCAATGCGGGAAGTCCTGGCCGATCCTGAAGCCGACGTGGACATATTGCCGGCTTTGGACCTTGCCCCG
ACGGCTATCGTCGAGGCCGCGAAATCTGCGGACTGCGGCCTGATTGTCACCGGCGTAGCGCGCTTCAATCACGTCGGTGA
CTACTTCATCGGCACGGCGGTCGACCATGTGGTGCGGCACGCGACGGTTCCGGTACTGGTCGTCAAGCAGAGGCCGCATA
ATGCCTATCGCACGATCGTGGTCGCTACCGACTACTCCAGCTGTTCGCGACTGGCTTTGCTTACTGCCGCGGAGTTCTTT
CCCGATGCAGCCATCCACCTCGTCCACGCCTACCACGTCCCTTATGAGGCATGGTTGCGCTCCGATGAGGTGCGGGAGGA
CGTGACGCGCGAGGCGCAGCGAGAGCTCGATGCCTTTGTTTTGGATCCCGCCATCCCCGCCAATGTGCGGCAGAGGATTT
CAGCCAAGCTCGTCTACGGTGAGACCCACACCGTGCTCTCCAGCACGGCTTACGAGCTCGGCGCGGATTTGCTGGTGCTC
GGCACCCATGGCTCTGGCGGGTATTTCGCGGCGGTCATGGGCCGGATGGCGGAATCGTTGCTGCGCTGTGCCGATATCGA
CACATTGGTGGTCCGGGAAATCGGCTCGACTGGAAGTGAACACAGATAG

Upstream 100 bases:

>100_bases
TGTCCTGGTGGGCGCCGGCGTGGACGCCGAAGTGACCCGGCGCAGGATCACCGAGCAGCGCGCCTATGAAACAGGTGACA
GCCCTTGAAGGAGAGAGCAG

Downstream 100 bases:

>100_bases
CCTCGTTATCGGGTTCGAGACAATGTGAACGTGCTCGGCTAGGCTACAGAAGACCTGTCAGGGAAGGGTTCAGTTTGCCC
CTTAGACTTACTCATCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: UspA Domain-Containing Protein; UspA Domain Protein; Universal Stress Family Protein; Universal Stress Protein UspA; Universal Stress Protein Family; UspA Protein; Usp Universal Stress Protein; Universal Stress Family; Usp-Like Protein

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MTTHGKPVLVATDLSARTDRAVDRATQLAGEWGVRLIVLHAIEPDSRLHARPELANQAMREVLADPEADVDILPALDLAP
TAIVEAAKSADCGLIVTGVARFNHVGDYFIGTAVDHVVRHATVPVLVVKQRPHNAYRTIVVATDYSSCSRLALLTAAEFF
PDAAIHLVHAYHVPYEAWLRSDEVREDVTREAQRELDAFVLDPAIPANVRQRISAKLVYGETHTVLSSTAYELGADLLVL
GTHGSGGYFAAVMGRMAESLLRCADIDTLVVREIGSTGSEHR

Sequences:

>Translated_282_residues
MTTHGKPVLVATDLSARTDRAVDRATQLAGEWGVRLIVLHAIEPDSRLHARPELANQAMREVLADPEADVDILPALDLAP
TAIVEAAKSADCGLIVTGVARFNHVGDYFIGTAVDHVVRHATVPVLVVKQRPHNAYRTIVVATDYSSCSRLALLTAAEFF
PDAAIHLVHAYHVPYEAWLRSDEVREDVTREAQRELDAFVLDPAIPANVRQRISAKLVYGETHTVLSSTAYELGADLLVL
GTHGSGGYFAAVMGRMAESLLRCADIDTLVVREIGSTGSEHR
>Mature_281_residues
TTHGKPVLVATDLSARTDRAVDRATQLAGEWGVRLIVLHAIEPDSRLHARPELANQAMREVLADPEADVDILPALDLAPT
AIVEAAKSADCGLIVTGVARFNHVGDYFIGTAVDHVVRHATVPVLVVKQRPHNAYRTIVVATDYSSCSRLALLTAAEFFP
DAAIHLVHAYHVPYEAWLRSDEVREDVTREAQRELDAFVLDPAIPANVRQRISAKLVYGETHTVLSSTAYELGADLLVLG
THGSGGYFAAVMGRMAESLLRCADIDTLVVREIGSTGSEHR

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 120 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30612; Mature: 30481

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTHGKPVLVATDLSARTDRAVDRATQLAGEWGVRLIVLHAIEPDSRLHARPELANQAMR
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHHH
EVLADPEADVDILPALDLAPTAIVEAAKSADCGLIVTGVARFNHVGDYFIGTAVDHVVRH
HHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHCCHHHHHHHHHHHHHH
ATVPVLVVKQRPHNAYRTIVVATDYSSCSRLALLTAAEFFPDAAIHLVHAYHVPYEAWLR
CCCCEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHC
SDEVREDVTREAQRELDAFVLDPAIPANVRQRISAKLVYGETHTVLSSTAYELGADLLVL
CHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHEEEEECCHHHHHHHHHHHCCCCEEEE
GTHGSGGYFAAVMGRMAESLLRCADIDTLVVREIGSTGSEHR
EECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TTHGKPVLVATDLSARTDRAVDRATQLAGEWGVRLIVLHAIEPDSRLHARPELANQAMR
CCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHHH
EVLADPEADVDILPALDLAPTAIVEAAKSADCGLIVTGVARFNHVGDYFIGTAVDHVVRH
HHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHCCHHHHHHHHHHHHHH
ATVPVLVVKQRPHNAYRTIVVATDYSSCSRLALLTAAEFFPDAAIHLVHAYHVPYEAWLR
CCCCEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHC
SDEVREDVTREAQRELDAFVLDPAIPANVRQRISAKLVYGETHTVLSSTAYELGADLLVL
CHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHEEEEECCHHHHHHHHHHHCCCCEEEE
GTHGSGGYFAAVMGRMAESLLRCADIDTLVVREIGSTGSEHR
EECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA