Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198306
Identifier: 87198306
GI number: 87198306
Start: 301057
End: 302388
Strand: Direct
Name: 87198306
Synonym: Saro_0281
Alternate gene names: NA
Gene position: 301057-302388 (Clockwise)
Preceding gene: 87198304
Following gene: 87198307
Centisome position: 8.45
GC content: 71.85
Gene sequence:
>1332_bases ATGGAAGGCGCGCTGGCGAAGGTCATGGCGCGGGCGGGGTTTGCGGCGCCGGTCAGCGGCCTGCAGCGCCTCTCGGGCGG GGCCAACATGGAATCGTGGCTGTTCGCCTGCGGGGACGACCGCTTCGTCCTGCGACGGGCTCCCTCGGCCGAATGGATCG CCGCGCGGCCGCTGGACATGGCGGGCGAGGCGGAACTGATCCGCCGCGCCCATGCCGGCGGCGTCGCCGCTCCCGAGGTC GTGGCCGAGCTGACCCCGCAGGACGCCTTCGGCATCGGGTTCATCATGCGCTGCCTGCCGGGCACGGCAGACCCTGCCGT CGCCCTTGCCTCCCCGCCGGAACCGGCCGCCGATCTCGCCGCCGACCTCGCCGGGGCGATGGCGCGCATCCACGCGCTCG ATCCGGCAAGCGTACCGTTCCTTCCCCGGCTTGAACCGGCAGAAGGCGTCGAAGGCCTTGCCCGCCAGTTCGCGGACGCG GGGGGTGATCGGCCGATCATCGCGCTGGGCCTCGCCTGGCTGCGTGCGCACCTGCCGCCGCCAGCCGCGCCGGTCGTCGT CCACGGCGATTTCCGTATCGGCAATCTCATGGTCCACGAAGGCCGCCTGTCGGGTGTGCTCGACTGGGAACTGGCGCATC TTGGCGACGGGCACGAGGACCTCGCCTATGGCTGCATGACGGTCTGGCGTTTCGGCCAGCTCGACCGCGAGGGCTTCGGG CTGACCGACGTTGCGACGCTGGCCCGCGCCTACGAGGCGGCGGGCGGCGAGCGGTTCGATCCCGCTCGTTTCCGCTTCTG GCTGGTCTACCGCACGGTGTGGTGGGCGCTGGGCTGCCTGTCGATGGGACAATCCTGGCGTAGCGGCACCGACCGCTCGC TCGAACGCGTGGTTGTCGCCCGGCGCTGCACGGAACAGGAACTCGACCTGCTGCTGCTGCTTGAAAGCGAGGCACCCGAG GCGGAGCGCGCGCGGCCCCTGCCGACGGATTGCCCGCCAGCCAATGCCGGTACCGGCGAGCCGTCGGCGGCGGAGATCCT CACTGCCGTGTCCGAATGGCTGGCGGCGACCGTGAAGGGCAAGCTCGACGGCCGGGAGCGATGGGAACTGGCGGTGGCGC AGAACGCGCTTGGCATCGTCCGCCGCGAGCTGGCGGGGCGTCCCGCCATTTCGGACAAGGCGCTCGCCGATTCGCTGCTG GCGGGGCACGAGGATCTTTCCACGCCCGGCCTGCTTGCCGCGCTGCGCCGCCGCGCGCTGTCCACCCTTTCCGCCGACAT GCCCAAATATCCCGCGCTGGCACGCGCACGCACGCTCTGGGAGCACCGCTGA
Upstream 100 bases:
>100_bases ATGGAACCCGAATGCCCGGCAAGATTCGCGCTGGACTTTAATCGATCGGTTAAGGATAGTCCCTCCGAAGGGTCGCAGAG AGGCCCGAGACGGAGGAGTG
Downstream 100 bases:
>100_bases TGGACTTCGACATTCCCGCCGATCTTGCCGCCTATGTCGCCGAACTCGACGCCTTCATCGAGGCCGAGATCAAGCCGCTC GAGGAGGCGGACGACAACAT
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; FadE36 Aminoglycoside Phosphotransferase; Tyrosine Protein KinaseAminoglycoside Phosphotransferase
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MEGALAKVMARAGFAAPVSGLQRLSGGANMESWLFACGDDRFVLRRAPSAEWIAARPLDMAGEAELIRRAHAGGVAAPEV VAELTPQDAFGIGFIMRCLPGTADPAVALASPPEPAADLAADLAGAMARIHALDPASVPFLPRLEPAEGVEGLARQFADA GGDRPIIALGLAWLRAHLPPPAAPVVVHGDFRIGNLMVHEGRLSGVLDWELAHLGDGHEDLAYGCMTVWRFGQLDREGFG LTDVATLARAYEAAGGERFDPARFRFWLVYRTVWWALGCLSMGQSWRSGTDRSLERVVVARRCTEQELDLLLLLESEAPE AERARPLPTDCPPANAGTGEPSAAEILTAVSEWLAATVKGKLDGRERWELAVAQNALGIVRRELAGRPAISDKALADSLL AGHEDLSTPGLLAALRRRALSTLSADMPKYPALARARTLWEHR
Sequences:
>Translated_443_residues MEGALAKVMARAGFAAPVSGLQRLSGGANMESWLFACGDDRFVLRRAPSAEWIAARPLDMAGEAELIRRAHAGGVAAPEV VAELTPQDAFGIGFIMRCLPGTADPAVALASPPEPAADLAADLAGAMARIHALDPASVPFLPRLEPAEGVEGLARQFADA GGDRPIIALGLAWLRAHLPPPAAPVVVHGDFRIGNLMVHEGRLSGVLDWELAHLGDGHEDLAYGCMTVWRFGQLDREGFG LTDVATLARAYEAAGGERFDPARFRFWLVYRTVWWALGCLSMGQSWRSGTDRSLERVVVARRCTEQELDLLLLLESEAPE AERARPLPTDCPPANAGTGEPSAAEILTAVSEWLAATVKGKLDGRERWELAVAQNALGIVRRELAGRPAISDKALADSLL AGHEDLSTPGLLAALRRRALSTLSADMPKYPALARARTLWEHR >Mature_443_residues MEGALAKVMARAGFAAPVSGLQRLSGGANMESWLFACGDDRFVLRRAPSAEWIAARPLDMAGEAELIRRAHAGGVAAPEV VAELTPQDAFGIGFIMRCLPGTADPAVALASPPEPAADLAADLAGAMARIHALDPASVPFLPRLEPAEGVEGLARQFADA GGDRPIIALGLAWLRAHLPPPAAPVVVHGDFRIGNLMVHEGRLSGVLDWELAHLGDGHEDLAYGCMTVWRFGQLDREGFG LTDVATLARAYEAAGGERFDPARFRFWLVYRTVWWALGCLSMGQSWRSGTDRSLERVVVARRCTEQELDLLLLLESEAPE AERARPLPTDCPPANAGTGEPSAAEILTAVSEWLAATVKGKLDGRERWELAVAQNALGIVRRELAGRPAISDKALADSLL AGHEDLSTPGLLAALRRRALSTLSADMPKYPALARARTLWEHR
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI211971008, Length=227, Percent_Identity=30.8370044052863, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI48976061, Length=227, Percent_Identity=30.8370044052863, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47461; Mature: 47461
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGALAKVMARAGFAAPVSGLQRLSGGANMESWLFACGDDRFVLRRAPSAEWIAARPLDM CCHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHEEECCCCCEEEECCCCCCEEEECCCCC AGEAELIRRAHAGGVAAPEVVAELTPQDAFGIGFIMRCLPGTADPAVALASPPEPAADLA CCHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHH ADLAGAMARIHALDPASVPFLPRLEPAEGVEGLARQFADAGGDRPIIALGLAWLRAHLPP HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC PAAPVVVHGDFRIGNLMVHEGRLSGVLDWELAHLGDGHEDLAYGCMTVWRFGQLDREGFG CCCCEEEECCEEECCEEEECCCCCCEECCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC LTDVATLARAYEAAGGERFDPARFRFWLVYRTVWWALGCLSMGQSWRSGTDRSLERVVVA HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHH RRCTEQELDLLLLLESEAPEAERARPLPTDCPPANAGTGEPSAAEILTAVSEWLAATVKG HHCCHHHCCEEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC KLDGRERWELAVAQNALGIVRRELAGRPAISDKALADSLLAGHEDLSTPGLLAALRRRAL CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH STLSADMPKYPALARARTLWEHR HHHHCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MEGALAKVMARAGFAAPVSGLQRLSGGANMESWLFACGDDRFVLRRAPSAEWIAARPLDM CCHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHEEECCCCCEEEECCCCCCEEEECCCCC AGEAELIRRAHAGGVAAPEVVAELTPQDAFGIGFIMRCLPGTADPAVALASPPEPAADLA CCHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHH ADLAGAMARIHALDPASVPFLPRLEPAEGVEGLARQFADAGGDRPIIALGLAWLRAHLPP HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC PAAPVVVHGDFRIGNLMVHEGRLSGVLDWELAHLGDGHEDLAYGCMTVWRFGQLDREGFG CCCCEEEECCEEECCEEEECCCCCCEECCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC LTDVATLARAYEAAGGERFDPARFRFWLVYRTVWWALGCLSMGQSWRSGTDRSLERVVVA HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHH RRCTEQELDLLLLLESEAPEAERARPLPTDCPPANAGTGEPSAAEILTAVSEWLAATVKG HHCCHHHCCEEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC KLDGRERWELAVAQNALGIVRRELAGRPAISDKALADSLLAGHEDLSTPGLLAALRRRAL CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH STLSADMPKYPALARARTLWEHR HHHHCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA