| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is boxB [H]
Identifier: 86751751
GI number: 86751751
Start: 5262467
End: 5263912
Strand: Reverse
Name: boxB [H]
Synonym: RPB_4653
Alternate gene names: 86751751
Gene position: 5263912-5262467 (Counterclockwise)
Preceding gene: 86751752
Following gene: 86751749
Centisome position: 98.73
GC content: 62.72
Gene sequence:
>1446_bases ATGAACATCATGAACGTCGACTACTCGACCAAGATTCCGAATAACGTCGATCTCGCCTCCGATCGTCAGGTGCTGAAGGC CTTGGAAGGCTGGCACCCGGGATACATCGACTGGTGGAACGACATGGGCCCCGAGGGCTTCCAGCAGTCGCTGGTGTATC TACGCACGGCCTATTCGGTCGATCCGCGCGGCTGGGCGAAATTCGACTACGTCAAGATGCCGGATTATCGCTGGGGCGTT CTGCTGGCGCCACAGGAGGAGAACCGTAAGATCCCGTTCGGCGAACATTACGGCGAGCCGGCCTGGCAGGAAGTCCCCGG CGAGTATCGTGCGATGCTGCGCCGCCTGATCGTGATCCAGGGCGACACCGAGCCGGCCTCGGTCGAGCAGCAGCGCCATC TCGGCAAGACCGCGCCGTCGCTCTACGACATGCGCAACCTGTTCCAGGTCAATGTCGAAGAGGGGCGCCATCTGTGGGCG ATGGTGTATCTCCTGCAGAAGTATTTCGGCCGCGACGGCCGCGAGGAGGCCGACGATCTGTTGCGCCGGCGCTCCGGCGA CGCCGATTCGCCGCGGATGCTCGGCGCCTTCAACGAAGCGACGCCGGACTGGCTGTCGTTCTTCATGTTCACCTATTTCA CCGATCGCGACGGCAAGATGCAGTTGCACTCGCTGGCGCAATCGGGCTTCGATCCGTTGTCGCGCACCTGCCGCTTCATG CTGACCGAAGAAGCGCATCACATGTTCGTCGGCGAGACCGGCATCACCCGCATCATCCAGCGCACCTGCGACGCGATGCG CGAGGCCGGCATCAGCGACCCGACGGACATTGCGAAAGTCCGCGCGCTCGGCGTCATCGATCTGCCGACGATCCAGAAGA AGCTCAATCTGCACTACACGCTGTCGCTCGATCTGTTCGGCTCGGAAGTTTCGACCAACGCCGCCAACGCCTTCAACTTC GGCATCAAGGGCCGCTACCACGAGACCCAGATCGACGATGATCACCAGCTCAAGAATTCGACGTATCCGGTGCTGAAATT CGTCGACGGCGAGATCAGGCGCGTCGACGAGCCGGCGCTGACCGCGCTCAACATGCGGCTGCGCGACGACTACTCGCAGG ATTGCGTCAAGGGCCTGCTGCGCTGGAACAAGGTGATCACCACCGCCGGCTACGACTATGCGCTGACGCTGCCGCACGTC GCCTTTCACCGCGCCATCGGCGAGTTCAAGGACGTTCACGCGACGCCCGAAGGCATCCTGATCGACGGTGCGACCTGGGA CAAGCGCAAGGACGAGTGGCTGCCGTCCACCGACGACGGCGACTTCATCGCCAGCCTGATGCAGCCGGTGAGCGACCCCG GCGCCTACGCCCCGTGGATCTCGCCCCCCAAAGTCGGCATCGACAACAAGCCCGGCGATTTCGAATATGTGAAGATCGAG ACCTGA
Upstream 100 bases:
>100_bases TGAAACGCGGTGGTCGCACCCTTCGAGGCCCGCGCCGGGTGGCACGGGCACCTCAGGGTGACGGCGTCAGAACGGCAAGC AGAGACCCAGGGAGCACGCC
Downstream 100 bases:
>100_bases GCGCCTCGCGTCCCCGCCGGGGCGGCTGGTCTGCCGCCCCTCGGGCTTCATCGGAGGATTTGCCAGCGAAGTCTTGGAGG CGGGCGTCCGCGCGTTGCGG
Product: benzoyl-CoA oxygenase component
Products: NA
Alternate protein names: Benzoyl-CoA 2,3-dioxygenase subunit B; Benzoyl-CoA dioxygenase oxygenase component [H]
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MNIMNVDYSTKIPNNVDLASDRQVLKALEGWHPGYIDWWNDMGPEGFQQSLVYLRTAYSVDPRGWAKFDYVKMPDYRWGV LLAPQEENRKIPFGEHYGEPAWQEVPGEYRAMLRRLIVIQGDTEPASVEQQRHLGKTAPSLYDMRNLFQVNVEEGRHLWA MVYLLQKYFGRDGREEADDLLRRRSGDADSPRMLGAFNEATPDWLSFFMFTYFTDRDGKMQLHSLAQSGFDPLSRTCRFM LTEEAHHMFVGETGITRIIQRTCDAMREAGISDPTDIAKVRALGVIDLPTIQKKLNLHYTLSLDLFGSEVSTNAANAFNF GIKGRYHETQIDDDHQLKNSTYPVLKFVDGEIRRVDEPALTALNMRLRDDYSQDCVKGLLRWNKVITTAGYDYALTLPHV AFHRAIGEFKDVHATPEGILIDGATWDKRKDEWLPSTDDGDFIASLMQPVSDPGAYAPWISPPKVGIDNKPGDFEYVKIE T
Sequences:
>Translated_481_residues MNIMNVDYSTKIPNNVDLASDRQVLKALEGWHPGYIDWWNDMGPEGFQQSLVYLRTAYSVDPRGWAKFDYVKMPDYRWGV LLAPQEENRKIPFGEHYGEPAWQEVPGEYRAMLRRLIVIQGDTEPASVEQQRHLGKTAPSLYDMRNLFQVNVEEGRHLWA MVYLLQKYFGRDGREEADDLLRRRSGDADSPRMLGAFNEATPDWLSFFMFTYFTDRDGKMQLHSLAQSGFDPLSRTCRFM LTEEAHHMFVGETGITRIIQRTCDAMREAGISDPTDIAKVRALGVIDLPTIQKKLNLHYTLSLDLFGSEVSTNAANAFNF GIKGRYHETQIDDDHQLKNSTYPVLKFVDGEIRRVDEPALTALNMRLRDDYSQDCVKGLLRWNKVITTAGYDYALTLPHV AFHRAIGEFKDVHATPEGILIDGATWDKRKDEWLPSTDDGDFIASLMQPVSDPGAYAPWISPPKVGIDNKPGDFEYVKIE T >Mature_481_residues MNIMNVDYSTKIPNNVDLASDRQVLKALEGWHPGYIDWWNDMGPEGFQQSLVYLRTAYSVDPRGWAKFDYVKMPDYRWGV LLAPQEENRKIPFGEHYGEPAWQEVPGEYRAMLRRLIVIQGDTEPASVEQQRHLGKTAPSLYDMRNLFQVNVEEGRHLWA MVYLLQKYFGRDGREEADDLLRRRSGDADSPRMLGAFNEATPDWLSFFMFTYFTDRDGKMQLHSLAQSGFDPLSRTCRFM LTEEAHHMFVGETGITRIIQRTCDAMREAGISDPTDIAKVRALGVIDLPTIQKKLNLHYTLSLDLFGSEVSTNAANAFNF GIKGRYHETQIDDDHQLKNSTYPVLKFVDGEIRRVDEPALTALNMRLRDDYSQDCVKGLLRWNKVITTAGYDYALTLPHV AFHRAIGEFKDVHATPEGILIDGATWDKRKDEWLPSTDDGDFIASLMQPVSDPGAYAPWISPPKVGIDNKPGDFEYVKIE T
Specific function: The BoxA/BoxB complex catalyzes the aerobic reduction/oxygenation of the aromatic ring of benzoyl-CoA to form 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. BoxB acts as the benzoyl-CoA oxygenase, after being reduced by the reductase component BoxA. BoxAB does not
COG id: COG3396
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the benzoyl-CoA oxygenase component B family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017635 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR007814 [H]
Pfam domain/function: PF05138 PaaA_PaaC [H]
EC number: =1.14.12.21 [H]
Molecular weight: Translated: 55021; Mature: 55021
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIMNVDYSTKIPNNVDLASDRQVLKALEGWHPGYIDWWNDMGPEGFQQSLVYLRTAYSV CCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC DPRGWAKFDYVKMPDYRWGVLLAPQEENRKIPFGEHYGEPAWQEVPGEYRAMLRRLIVIQ CCCCCCEECEEECCCCCCEEEECCCCCCCCCCCHHHCCCCHHHHCCHHHHHHHHHHEEEE GDTEPASVEQQRHLGKTAPSLYDMRNLFQVNVEEGRHLWAMVYLLQKYFGRDGREEADDL CCCCCCHHHHHHHCCCCCCHHHHHHHHHEEEHHHCHHHHHHHHHHHHHHCCCCCHHHHHH LRRRSGDADSPRMLGAFNEATPDWLSFFMFTYFTDRDGKMQLHSLAQSGFDPLSRTCRFM HHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHCCCCHHHHHHHHH LTEEAHHMFVGETGITRIIQRTCDAMREAGISDPTDIAKVRALGVIDLPTIQKKLNLHYT HHHCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHCCEEEE LSLDLFGSEVSTNAANAFNFGIKGRYHETQIDDDHQLKNSTYPVLKFVDGEIRRVDEPAL EEEEEECCCCCCCCCCCEECCCCCCEECCCCCCCHHHCCCCCCEEEECCCHHHHCCCHHH TALNMRLRDDYSQDCVKGLLRWNKVITTAGYDYALTLPHVAFHRAIGEFKDVHATPEGIL HHHHHHHHCCHHHHHHHHHHHHHHHEEECCCCEEEECHHHHHHHHHHHHHHHCCCCCCEE IDGATWDKRKDEWLPSTDDGDFIASLMQPVSDPGAYAPWISPPKVGIDNKPGDFEYVKIE EECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE T C >Mature Secondary Structure MNIMNVDYSTKIPNNVDLASDRQVLKALEGWHPGYIDWWNDMGPEGFQQSLVYLRTAYSV CCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC DPRGWAKFDYVKMPDYRWGVLLAPQEENRKIPFGEHYGEPAWQEVPGEYRAMLRRLIVIQ CCCCCCEECEEECCCCCCEEEECCCCCCCCCCCHHHCCCCHHHHCCHHHHHHHHHHEEEE GDTEPASVEQQRHLGKTAPSLYDMRNLFQVNVEEGRHLWAMVYLLQKYFGRDGREEADDL CCCCCCHHHHHHHCCCCCCHHHHHHHHHEEEHHHCHHHHHHHHHHHHHHCCCCCHHHHHH LRRRSGDADSPRMLGAFNEATPDWLSFFMFTYFTDRDGKMQLHSLAQSGFDPLSRTCRFM HHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHCCCCHHHHHHHHH LTEEAHHMFVGETGITRIIQRTCDAMREAGISDPTDIAKVRALGVIDLPTIQKKLNLHYT HHHCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHCCEEEE LSLDLFGSEVSTNAANAFNFGIKGRYHETQIDDDHQLKNSTYPVLKFVDGEIRRVDEPAL EEEEEECCCCCCCCCCCEECCCCCCEECCCCCCCHHHCCCCCCEEEECCCHHHHCCCHHH TALNMRLRDDYSQDCVKGLLRWNKVITTAGYDYALTLPHVAFHRAIGEFKDVHATPEGIL HHHHHHHHCCHHHHHHHHHHHHHHHEEECCCCEEEECHHHHHHHHHHHHHHHCCCCCCEE IDGATWDKRKDEWLPSTDDGDFIASLMQPVSDPGAYAPWISPPKVGIDNKPGDFEYVKIE EECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE T C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11222587; 12399500 [H]