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The map label for this gene is ctaG

Identifier: 86751682

GI number: 86751682

Start: 5179101

End: 5179727

Strand: Reverse

Name: ctaG

Synonym: RPB_4584

Alternate gene names: 86751682

Gene position: 5179727-5179101 (Counterclockwise)

Preceding gene: 86751683

Following gene: 86751681

Centisome position: 97.15

GC content: 66.03

Gene sequence:

>627_bases
ATGCCGGATACGCAGCCCAACGTTTCGCCGAACCCGATCCGTCGCCGCGGTCTCGGGCGCGATGCGACGGTTGCGTCGAT
CTGCGGTCTGGTGGTGGCGCTGATGGTCGGCGCGTCGTTCGCGGCGGTGCCGTTCTACAACTGGTTCTGCCGCACCACCG
GGTTCAACGGCACCACGCAAGTGGCCGGCGTCGCGCCGTCGTCGGCGCCGCTGGCCCGCAAGGTCGCGGTGCGGTTCGAT
TCCAATATCAACGGGCTGCCGTGGACCTTCGAGCCGGAGCAGCGCGAGATCGAGGTGGCGATCGGCCAGGTCTTCACCGC
GTATTACAGCGTCACCAATACGGCGAAACACGCCACCACCGGGCAGGCGGCCTACAACGTCACGCCGCTCACGGTCGGCT
CCTACTTCACCAAGATCAACTGCTTCTGCTTCACCGAGCAGACGCTCGCCGCCGGCGAGACCCGCGAGATGCCGGTGGTG
TTCTACGTCGATCCGTCGTTCGCCGCCGACAGCGAGAACGACGCCGTCAAGACCATCACGCTGTCCTACACGTTCTATCC
CGTGCGCGAGCCGGCGCCGAAGCCGCTGGCTTCGACCGCGCCCGACAAGCGCAAGGGCAATTTATAA

Upstream 100 bases:

>100_bases
TCGCCTTGGCGCTCGCCGTGCTGGTGGCGCTGTTCTTCGCGGTGACGATGGTCAAGGGGCCGATCGTGCTGCAACGGCCG
ATGTGAGGAGCGAGCCAGCG

Downstream 100 bases:

>100_bases
ACGACACGGAAACGCTGCACGACGACTGCCGGACTGGACTCGGCGGAGACCGAACCGGCACTGCCCATGGAGAGCACCAC
AATGGCCACGGCACACGCGA

Product: cytochrome C oxidase assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MPDTQPNVSPNPIRRRGLGRDATVASICGLVVALMVGASFAAVPFYNWFCRTTGFNGTTQVAGVAPSSAPLARKVAVRFD
SNINGLPWTFEPEQREIEVAIGQVFTAYYSVTNTAKHATTGQAAYNVTPLTVGSYFTKINCFCFTEQTLAAGETREMPVV
FYVDPSFAADSENDAVKTITLSYTFYPVREPAPKPLASTAPDKRKGNL

Sequences:

>Translated_208_residues
MPDTQPNVSPNPIRRRGLGRDATVASICGLVVALMVGASFAAVPFYNWFCRTTGFNGTTQVAGVAPSSAPLARKVAVRFD
SNINGLPWTFEPEQREIEVAIGQVFTAYYSVTNTAKHATTGQAAYNVTPLTVGSYFTKINCFCFTEQTLAAGETREMPVV
FYVDPSFAADSENDAVKTITLSYTFYPVREPAPKPLASTAPDKRKGNL
>Mature_207_residues
PDTQPNVSPNPIRRRGLGRDATVASICGLVVALMVGASFAAVPFYNWFCRTTGFNGTTQVAGVAPSSAPLARKVAVRFDS
NINGLPWTFEPEQREIEVAIGQVFTAYYSVTNTAKHATTGQAAYNVTPLTVGSYFTKINCFCFTEQTLAAGETREMPVVF
YVDPSFAADSENDAVKTITLSYTFYPVREPAPKPLASTAPDKRKGNL

Specific function: Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I

COG id: COG3175

COG function: function code O; Cytochrome oxidase assembly factor

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX11/CtaG family

Homologues:

Organism=Homo sapiens, GI4758034, Length=183, Percent_Identity=40.4371584699454, Blast_Score=133, Evalue=1e-31,
Organism=Homo sapiens, GI242247057, Length=141, Percent_Identity=34.0425531914894, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI242247061, Length=133, Percent_Identity=35.3383458646617, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71990692, Length=187, Percent_Identity=36.3636363636364, Blast_Score=131, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6325125, Length=173, Percent_Identity=38.728323699422, Blast_Score=128, Evalue=6e-31,
Organism=Drosophila melanogaster, GI24581944, Length=162, Percent_Identity=41.358024691358, Blast_Score=133, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COXZ_RHOP2 (Q2IR93)

Other databases:

- EMBL:   CP000250
- RefSeq:   YP_488178.1
- ProteinModelPortal:   Q2IR93
- SMR:   Q2IR93
- STRING:   Q2IR93
- GeneID:   3912401
- GenomeReviews:   CP000250_GR
- KEGG:   rpb:RPB_4584
- eggNOG:   COG3175
- HOGENOM:   HBG525908
- OMA:   SNNDIIG
- ProtClustDB:   PRK05089
- BioCyc:   RPAL316058:RPB_4584-MONOMER
- HAMAP:   MF_00155
- InterPro:   IPR007533
- Gene3D:   G3DSA:2.60.370.10
- PANTHER:   PTHR21320
- PIRSF:   PIRSF005413

Pfam domain/function: PF04442 CtaG_Cox11; SSF110111 CtaG_Cox11

EC number: NA

Molecular weight: Translated: 22505; Mature: 22373

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x2092161c)-;

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDTQPNVSPNPIRRRGLGRDATVASICGLVVALMVGASFAAVPFYNWFCRTTGFNGTTQ
CCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHEHHHHEEEEEECCCCCCCE
VAGVAPSSAPLARKVAVRFDSNINGLPWTFEPEQREIEVAIGQVFTAYYSVTNTAKHATT
EEECCCCCCCHHEEEEEEECCCCCCCCCEECCCCCEEHHHHHHHHHHHHHHHCCCCCCCC
GQAAYNVTPLTVGSYFTKINCFCFTEQTLAAGETREMPVVFYVDPSFAADSENDAVKTIT
CCCEEEECEEECCCCEEEEEEEEEECHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEEE
LSYTFYPVREPAPKPLASTAPDKRKGNL
EEEEEEECCCCCCCCCCCCCCCCCCCCH
>Mature Secondary Structure 
PDTQPNVSPNPIRRRGLGRDATVASICGLVVALMVGASFAAVPFYNWFCRTTGFNGTTQ
CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHEHHHHEEEEEECCCCCCCE
VAGVAPSSAPLARKVAVRFDSNINGLPWTFEPEQREIEVAIGQVFTAYYSVTNTAKHATT
EEECCCCCCCHHEEEEEEECCCCCCCCCEECCCCCEEHHHHHHHHHHHHHHHCCCCCCCC
GQAAYNVTPLTVGSYFTKINCFCFTEQTLAAGETREMPVVFYVDPSFAADSENDAVKTIT
CCCEEEECEEECCCCEEEEEEEEEECHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEEE
LSYTFYPVREPAPKPLASTAPDKRKGNL
EEEEEEECCCCCCCCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA