Click here to switch to the map view.

The map label for this gene is yjcK [H]

Identifier: 86751674

GI number: 86751674

Start: 5172662

End: 5173249

Strand: Reverse

Name: yjcK [H]

Synonym: RPB_4576

Alternate gene names: 86751674

Gene position: 5173249-5172662 (Counterclockwise)

Preceding gene: 86751675

Following gene: 86751673

Centisome position: 97.03

GC content: 66.67

Gene sequence:

>588_bases
ATGGCGCTGTTTCGAATGCCGTCCGCCGGCCCCGCCGCGTTGGCGCCGCGCGGCTTCGGGCTGTTGCTGCGCTCTCCCCA
GATGGCCGACTATGTGCAATGGGCCGAGCTGCGTGACCGAAGCCGCGCCTATCTCACGCCCTGGGAGCCGATCTGGCCGT
CGGACGATCTGACCCGCTCCGGCTTTCGCCGCCGGCTGCGGCGCTACGCCGAGGACATCGCGGCCGATCGTTCCTATCCG
TTTCTGGTGTTTCGCGAAGCCGACGGCGAAATGATCGGCGGCGTCACCCTCGCCAATGTCCGCCGCGGTATCGTCCAGGC
CGGCACCATCGGCTATTGGGTCGGTGAACCGCATGCCGGTCGCGGCTATATGACGGCGGCGCTGCGGGTGCTGCTGCCGA
CGCTGTTCGGCGAGCTCAATCTGCACCGGGTCGAGGCCGCCTGCATCCCGACCAACGCGCCTTCGATCCGCGTGCTGGAA
AAATGCGGCTTCACGCGCGAAGGGCTGGCGCGGCGCTATCTCTGCATCAACGGCATCTGGCAGGATCATCTGCTGTTCGG
ATTGTTGCACGAAGATTTCCGCGGCTGA

Upstream 100 bases:

>100_bases
GGAAGGATTGACCCAGTCCAAGGCCAAAACCTCGTATCATTGACGCCGCGCGCGGCGCGCAGGGCCGAGCGTCCAGCGGA
GCGCGGATCGGAGTGTCGTC

Downstream 100 bases:

>100_bases
AGGCGGCCCGAATCGCCGGACACGCGAGCCTCGCCGCCTTTGGATCGCCGGCTTTGCTTTGCTATAACGCCGGCTGCACA
GACGAAATTCACAGCCGGGG

Product: GCN5-related N-acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MALFRMPSAGPAALAPRGFGLLLRSPQMADYVQWAELRDRSRAYLTPWEPIWPSDDLTRSGFRRRLRRYAEDIAADRSYP
FLVFREADGEMIGGVTLANVRRGIVQAGTIGYWVGEPHAGRGYMTAALRVLLPTLFGELNLHRVEAACIPTNAPSIRVLE
KCGFTREGLARRYLCINGIWQDHLLFGLLHEDFRG

Sequences:

>Translated_195_residues
MALFRMPSAGPAALAPRGFGLLLRSPQMADYVQWAELRDRSRAYLTPWEPIWPSDDLTRSGFRRRLRRYAEDIAADRSYP
FLVFREADGEMIGGVTLANVRRGIVQAGTIGYWVGEPHAGRGYMTAALRVLLPTLFGELNLHRVEAACIPTNAPSIRVLE
KCGFTREGLARRYLCINGIWQDHLLFGLLHEDFRG
>Mature_194_residues
ALFRMPSAGPAALAPRGFGLLLRSPQMADYVQWAELRDRSRAYLTPWEPIWPSDDLTRSGFRRRLRRYAEDIAADRSYPF
LVFREADGEMIGGVTLANVRRGIVQAGTIGYWVGEPHAGRGYMTAALRVLLPTLFGELNLHRVEAACIPTNAPSIRVLEK
CGFTREGLARRYLCINGIWQDHLLFGLLHEDFRG

Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S5 [H]

COG id: COG1670

COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI1787305, Length=173, Percent_Identity=31.7919075144509, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: =2.3.1.128 [H]

Molecular weight: Translated: 22019; Mature: 21888

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALFRMPSAGPAALAPRGFGLLLRSPQMADYVQWAELRDRSRAYLTPWEPIWPSDDLTRS
CCEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHH
GFRRRLRRYAEDIAADRSYPFLVFREADGEMIGGVTLANVRRGIVQAGTIGYWVGEPHAG
HHHHHHHHHHHHHHCCCCCCEEEEECCCCCEECCEEHHHHHHHHHHCCCEEEECCCCCCC
RGYMTAALRVLLPTLFGELNLHRVEAACIPTNAPSIRVLEKCGFTREGLARRYLCINGIW
CHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHCCCC
QDHLLFGLLHEDFRG
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALFRMPSAGPAALAPRGFGLLLRSPQMADYVQWAELRDRSRAYLTPWEPIWPSDDLTRS
CEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHH
GFRRRLRRYAEDIAADRSYPFLVFREADGEMIGGVTLANVRRGIVQAGTIGYWVGEPHAG
HHHHHHHHHHHHHHCCCCCCEEEEECCCCCEECCEEHHHHHHHHHHCCCEEEECCCCCCC
RGYMTAALRVLLPTLFGELNLHRVEAACIPTNAPSIRVLEKCGFTREGLARRYLCINGIW
CHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHCCCC
QDHLLFGLLHEDFRG
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]