Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is phnN [C]
Identifier: 86751204
GI number: 86751204
Start: 4665972
End: 4666577
Strand: Direct
Name: phnN [C]
Synonym: RPB_4096
Alternate gene names: 86751204
Gene position: 4665972-4666577 (Clockwise)
Preceding gene: 86751203
Following gene: 86751205
Centisome position: 87.51
GC content: 67.33
Gene sequence:
>606_bases ATGACCGACTTCGCGCCGATCACCGCACACAACGGCCGGATCGGACCCGGACGGCTGGTGCTGTTGGTCGGCCCGAGCGG CGCCGGCAAGGACACGCTGCTCGGCATCGCCAAGGCGACCTGCCTCGGCAAGCGCGACATCGTGTTCGCACGGCGCGTGA TCACGCGCGAGCCTTCGCCTGCCGAAGACAATCTGCAGAGCACGCCCGAGGCGTTTCGGGCCATGATCGCCGGCGGTGAA TTCGCGCTGCATTGGCAGGCGCACGGCCACAGCTACGGCGTGCTGCGCTCGATCGACAACGAGCTTCGCGCCGGCCACAC CGTGGTCGCGAACGTCTCGCGCACGGTCATCGCGCTGGCGCGGCAGACCTATGAGAACGTGACCGTCGTGCTCGTCACCG CCCCGGAGGACATTCTCGCGAACCGCATCGCGGCGCGGGCGAGACGCAGCGACGGCATCAGCGCGGATCGAATCGGCCGA ACGGTCGGCAGTAGCGCTGACGCCGACTTCACCATCCTGAACGTCGCGAGCCGTGACGACCATGCTCGCGAACTCGTCGA GATCATCTGCGACGGAGATTCCGCCAGAAGGAGAGTGGTGCAGTGA
Upstream 100 bases:
>100_bases GCGAGATCGCGGTCGGCAAGCGCGCCGACCTGATCCGCGTGCACGTCGCCCACCACGTTCCGGCGGTGCGCAGCGTCTGG CGCGCAGGGCATCGCGTGGC
Downstream 100 bases:
>100_bases CGATCCCGGCCATCACGTCGATCAACGATCTCGAGCAACTTTACGGCGTCGCGGGCGACGCTTCGACCGAAAAGGTCTCG GACCGCATCACGCCGGCGTA
Product: phosphonate metabolism, 1,5-bisphosphokinase (PRPP-forming) PhnN
Products: NA
Alternate protein names: TdRPase 1 [H]
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MTDFAPITAHNGRIGPGRLVLLVGPSGAGKDTLLGIAKATCLGKRDIVFARRVITREPSPAEDNLQSTPEAFRAMIAGGE FALHWQAHGHSYGVLRSIDNELRAGHTVVANVSRTVIALARQTYENVTVVLVTAPEDILANRIAARARRSDGISADRIGR TVGSSADADFTILNVASRDDHARELVEIICDGDSARRRVVQ
Sequences:
>Translated_201_residues MTDFAPITAHNGRIGPGRLVLLVGPSGAGKDTLLGIAKATCLGKRDIVFARRVITREPSPAEDNLQSTPEAFRAMIAGGE FALHWQAHGHSYGVLRSIDNELRAGHTVVANVSRTVIALARQTYENVTVVLVTAPEDILANRIAARARRSDGISADRIGR TVGSSADADFTILNVASRDDHARELVEIICDGDSARRRVVQ >Mature_200_residues TDFAPITAHNGRIGPGRLVLLVGPSGAGKDTLLGIAKATCLGKRDIVFARRVITREPSPAEDNLQSTPEAFRAMIAGGEF ALHWQAHGHSYGVLRSIDNELRAGHTVVANVSRTVIALARQTYENVTVVLVTAPEDILANRIAARARRSDGISADRIGRT VGSSADADFTILNVASRDDHARELVEIICDGDSARRRVVQ
Specific function: Belongs To An Operon Involved In Alkylphosphonate Uptake And C-P Lyase. Exact Function Not Known. [C]
COG id: COG3709
COG function: function code P; Uncharacterized component of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790532, Length=176, Percent_Identity=32.3863636363636, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000312 - InterPro: IPR017459 - InterPro: IPR012699 - InterPro: IPR013102 - InterPro: IPR000053 - InterPro: IPR017872 - InterPro: IPR013466 [H]
Pfam domain/function: PF00591 Glycos_transf_3; PF07831 PYNP_C [H]
EC number: =2.4.2.4 [H]
Molecular weight: Translated: 21571; Mature: 21440
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDFAPITAHNGRIGPGRLVLLVGPSGAGKDTLLGIAKATCLGKRDIVFARRVITREPSP CCCCCCEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC AEDNLQSTPEAFRAMIAGGEFALHWQAHGHSYGVLRSIDNELRAGHTVVANVSRTVIALA CCCCHHCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHH RQTYENVTVVLVTAPEDILANRIAARARRSDGISADRIGRTVGSSADADFTILNVASRDD HHHHCCEEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCEEEEEECCCCH HARELVEIICDGDSARRRVVQ HHHHHHHHHCCCCHHHHHCCC >Mature Secondary Structure TDFAPITAHNGRIGPGRLVLLVGPSGAGKDTLLGIAKATCLGKRDIVFARRVITREPSP CCCCCEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC AEDNLQSTPEAFRAMIAGGEFALHWQAHGHSYGVLRSIDNELRAGHTVVANVSRTVIALA CCCCHHCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHH RQTYENVTVVLVTAPEDILANRIAARARRSDGISADRIGRTVGSSADADFTILNVASRDD HHHHCCEEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCEEEEEECCCCH HARELVEIICDGDSARRRVVQ HHHHHHHHHCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA