Click here to switch to the map view.

The map label for this gene is cbbX [H]

Identifier: 86751070

GI number: 86751070

Start: 4523699

End: 4524619

Strand: Reverse

Name: cbbX [H]

Synonym: RPB_3962

Alternate gene names: 86751070

Gene position: 4524619-4523699 (Counterclockwise)

Preceding gene: 86751071

Following gene: 86751066

Centisome position: 84.86

GC content: 64.82

Gene sequence:

>921_bases
TTGGACACGACCTCCGCCGACAATGAAGCCGCGTCGCAGGCCCCGATCGATCTTCGCAAGGAGTTCGAGGAGGTCGGCAT
CGGCGAGGTGCTCGATCAGCTCGATCGCGAGCTGATCGGGCTCCGCCCGGTCAAGACGCGGATCCGCGAGATCGCGGCGC
TGCTGCTGGTCGAACGGCTGCGCAAGCGGATGGGGCTCGCCACCGGCAACCCGACCCTGCACATGTCGTTCACCGGCAAT
CCCGGCACCGGCAAGACGACGGTCGCGCTGCGGATCGCCTCGATCCTGCACAGGCTCGGCTTCGTCCGCCGCGGCCACGT
GGTGTCCGTGACGCGCGACGAACTGGTCGGGCAATATATCGGCCACACCGCGCCGAAGACCAAGGAGGTGCTGAAGAAGG
CGATGGGCGGCGTGCTGTTCATCGACGAGGCCTACTATCTGTATCGCCCCGAAAACGAGCGGGATTACGGCCAGGAAGCG
ATCGAGATCCTGCTGCAGGTGATGGAGAACCAGCGTGACGATCTGGTGGTGATCCTCGCCGGCTATGCCGACCGGATGGA
GAAATTCTTCGCCTCGAATCCGGGTTTCCGCTCGCGGATCGCGCATCACATAGATTTCCCCGACTACACCGACGGCGAGT
TGCTCGGGATCGCGGAAGGCATGCTGCGCGAACAGAACTATCACTTCGACGCGGACGCACGTGCCGCGTTCGAGCGCTAC
ATCGCGGTGCGCAAGACGCAAGCACTGTTCGCCAACGCCCGCTCGATCCGCAACGCGCTCGACCGCATCCGTCTGCGTCA
GGCCAACCGCCTGATCGCCGACCTCGATCGCAAGCTCAGCGCCGACGATCTGATGAGGATCGAGGCAAAGGACGTGCTGG
CGAGCCGGGTGTTCGGCATGGGGGAGGGTGGCGGAGGGTGA

Upstream 100 bases:

>100_bases
TCCGGCTGGATCGCCAGGAAGTCGACGGCCGCAACATGCGCTACACCACCAGGTCCTATGCGGCTGACAAGCCCGAGGGC
AGCCGCTACGGAGGGTGATC

Downstream 100 bases:

>100_bases
CAAACCTCCCGTTTGTCATTCCGGAAGGCTCGCGAAGCGAGACTGTCCGGAATCCATATCCCATGGAGTTGCTTTGGAGC
CCGGCGTTGCGACGCCGTGC

Product: AAA ATPase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MDTTSADNEAASQAPIDLRKEFEEVGIGEVLDQLDRELIGLRPVKTRIREIAALLLVERLRKRMGLATGNPTLHMSFTGN
PGTGKTTVALRIASILHRLGFVRRGHVVSVTRDELVGQYIGHTAPKTKEVLKKAMGGVLFIDEAYYLYRPENERDYGQEA
IEILLQVMENQRDDLVVILAGYADRMEKFFASNPGFRSRIAHHIDFPDYTDGELLGIAEGMLREQNYHFDADARAAFERY
IAVRKTQALFANARSIRNALDRIRLRQANRLIADLDRKLSADDLMRIEAKDVLASRVFGMGEGGGG

Sequences:

>Translated_306_residues
MDTTSADNEAASQAPIDLRKEFEEVGIGEVLDQLDRELIGLRPVKTRIREIAALLLVERLRKRMGLATGNPTLHMSFTGN
PGTGKTTVALRIASILHRLGFVRRGHVVSVTRDELVGQYIGHTAPKTKEVLKKAMGGVLFIDEAYYLYRPENERDYGQEA
IEILLQVMENQRDDLVVILAGYADRMEKFFASNPGFRSRIAHHIDFPDYTDGELLGIAEGMLREQNYHFDADARAAFERY
IAVRKTQALFANARSIRNALDRIRLRQANRLIADLDRKLSADDLMRIEAKDVLASRVFGMGEGGGG
>Mature_306_residues
MDTTSADNEAASQAPIDLRKEFEEVGIGEVLDQLDRELIGLRPVKTRIREIAALLLVERLRKRMGLATGNPTLHMSFTGN
PGTGKTTVALRIASILHRLGFVRRGHVVSVTRDELVGQYIGHTAPKTKEVLKKAMGGVLFIDEAYYLYRPENERDYGQEA
IEILLQVMENQRDDLVVILAGYADRMEKFFASNPGFRSRIAHHIDFPDYTDGELLGIAEGMLREQNYHFDADARAAFERY
IAVRKTQALFANARSIRNALDRIRLRQANRLIADLDRKLSADDLMRIEAKDVLASRVFGMGEGGGG

Specific function: Seems to be necessary for the expression of RuBisCO [H]

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cbxX/cfxQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003959
- InterPro:   IPR000641
- InterPro:   IPR000470 [H]

Pfam domain/function: PF00004 AAA [H]

EC number: NA

Molecular weight: Translated: 34329; Mature: 34329

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTTSADNEAASQAPIDLRKEFEEVGIGEVLDQLDRELIGLRPVKTRIREIAALLLVERL
CCCCCCCCCHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RKRMGLATGNPTLHMSFTGNPGTGKTTVALRIASILHRLGFVRRGHVVSVTRDELVGQYI
HHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHH
GHTAPKTKEVLKKAMGGVLFIDEAYYLYRPENERDYGQEAIEILLQVMENQRDDLVVILA
CCCCCHHHHHHHHHHCCEEEEECEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE
GYADRMEKFFASNPGFRSRIAHHIDFPDYTDGELLGIAEGMLREQNYHFDADARAAFERY
CHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
IAVRKTQALFANARSIRNALDRIRLRQANRLIADLDRKLSADDLMRIEAKDVLASRVFGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
GEGGGG
CCCCCC
>Mature Secondary Structure
MDTTSADNEAASQAPIDLRKEFEEVGIGEVLDQLDRELIGLRPVKTRIREIAALLLVERL
CCCCCCCCCHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RKRMGLATGNPTLHMSFTGNPGTGKTTVALRIASILHRLGFVRRGHVVSVTRDELVGQYI
HHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHH
GHTAPKTKEVLKKAMGGVLFIDEAYYLYRPENERDYGQEAIEILLQVMENQRDDLVVILA
CCCCCHHHHHHHHHHCCEEEEECEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE
GYADRMEKFFASNPGFRSRIAHHIDFPDYTDGELLGIAEGMLREQNYHFDADARAAFERY
CHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
IAVRKTQALFANARSIRNALDRIRLRQANRLIADLDRKLSADDLMRIEAKDVLASRVFGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
GEGGGG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9006018 [H]