Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is ureH [H]
Identifier: 86750984
GI number: 86750984
Start: 4431137
End: 4431835
Strand: Reverse
Name: ureH [H]
Synonym: RPB_3876
Alternate gene names: 86750984
Gene position: 4431835-4431137 (Counterclockwise)
Preceding gene: 86750987
Following gene: 86750983
Centisome position: 83.12
GC content: 69.96
Gene sequence:
>699_bases ATGTTCGCAATTCTGGGGTTGGGGTTTCTGCTGGGGATGCAGCATGCGCTCGAGGTCGATCATATCGCGGCGGTCTCGAC GATCGCGGCGCGGCGCAGCGGCGTGCGCGACATCGTCAAGCACGGGCTGACCTGGGGGCTCGGCCACACGCTGACGCTGT TCCTGTTCGCCGGCGTCGCCATCGTGCTCGGCCAGGCGATCCCGGACCACATCGCCACCCCGCTGGAAGGCGCGGTCGGA TTCATGCTGGTCGGCCTCGGCGGCCATCTGCTGTGGCGGCTGTGGCAGGACCGCGTCCACGCCCATGTGCATCAGCACGG CGACGGCACGCGCCACATTCATCTGCACAGCCACGCGGACCAGCGCGCCGCGCACGATGCGCCGAGCGCCCACATCCACG CGCACGGCTTCCGCTGGCGCACGCTGATCGTCGGGCTGATGCACGGCATGGCCGGCTCCGCGGCGCTGCTGGTGCTCGCG GTGTCGCAGGCGCAGAGCCCGACGCAGGGGCTGCTCTACGTGGCGCTGTTCGGCGTCGGCTCGATGGTCGGCATGGGCGC GCTGTCGGCCGCGATCGCGGTGCCGCTGGTGATCTCGGCGCGCGGTCTGACTGCCGTCAATCGCGGGCTGCAGATCGCGG TCGGCGTGCTGACCATCGCCATCGGGCTACACACGATCCAGTCGACGCTGTTGTCCTGA
Upstream 100 bases:
>100_bases TCTCCCTTGTTCCGGCTCTGCGGCCGTGTTGTGATCGCGAACTTACACCATTCCGATGCTGCTGCAATTTCGGCCGGCCT AACACGACGATCAGGGGACG
Downstream 100 bases:
>100_bases GAGCCTCACATCAACGCCCGCATTCGTCATTGCGAGCGCGGCGAAGCAATCCAGAAGGCCGCGCAGCAAGTCTGAATTGC TTCGTCGCGGAGCCTGTGCT
Product: high-affinity nickel-transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MFAILGLGFLLGMQHALEVDHIAAVSTIAARRSGVRDIVKHGLTWGLGHTLTLFLFAGVAIVLGQAIPDHIATPLEGAVG FMLVGLGGHLLWRLWQDRVHAHVHQHGDGTRHIHLHSHADQRAAHDAPSAHIHAHGFRWRTLIVGLMHGMAGSAALLVLA VSQAQSPTQGLLYVALFGVGSMVGMGALSAAIAVPLVISARGLTAVNRGLQIAVGVLTIAIGLHTIQSTLLS
Sequences:
>Translated_232_residues MFAILGLGFLLGMQHALEVDHIAAVSTIAARRSGVRDIVKHGLTWGLGHTLTLFLFAGVAIVLGQAIPDHIATPLEGAVG FMLVGLGGHLLWRLWQDRVHAHVHQHGDGTRHIHLHSHADQRAAHDAPSAHIHAHGFRWRTLIVGLMHGMAGSAALLVLA VSQAQSPTQGLLYVALFGVGSMVGMGALSAAIAVPLVISARGLTAVNRGLQIAVGVLTIAIGLHTIQSTLLS >Mature_232_residues MFAILGLGFLLGMQHALEVDHIAAVSTIAARRSGVRDIVKHGLTWGLGHTLTLFLFAGVAIVLGQAIPDHIATPLEGAVG FMLVGLGGHLLWRLWQDRVHAHVHQHGDGTRHIHLHSHADQRAAHDAPSAHIHAHGFRWRTLIVGLMHGMAGSAALLVLA VSQAQSPTQGLLYVALFGVGSMVGMGALSAAIAVPLVISARGLTAVNRGLQIAVGVLTIAIGLHTIQSTLLS
Specific function: Probably facilitates nickel incorporation. May constitute a multicomponent high-affinity nickel transporter. Not essential for the expression of catalytically active urease [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NiCoT transporter (TC 2.A.52) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011541 [H]
Pfam domain/function: PF03824 NicO [H]
EC number: NA
Molecular weight: Translated: 24336; Mature: 24336
Theoretical pI: Translated: 11.10; Mature: 11.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAILGLGFLLGMQHALEVDHIAAVSTIAARRSGVRDIVKHGLTWGLGHTLTLFLFAGVA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHH IVLGQAIPDHIATPLEGAVGFMLVGLGGHLLWRLWQDRVHAHVHQHGDGTRHIHLHSHAD HHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCH QRAAHDAPSAHIHAHGFRWRTLIVGLMHGMAGSAALLVLAVSQAQSPTQGLLYVALFGVG HHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH SMVGMGALSAAIAVPLVISARGLTAVNRGLQIAVGVLTIAIGLHTIQSTLLS HHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFAILGLGFLLGMQHALEVDHIAAVSTIAARRSGVRDIVKHGLTWGLGHTLTLFLFAGVA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHH IVLGQAIPDHIATPLEGAVGFMLVGLGGHLLWRLWQDRVHAHVHQHGDGTRHIHLHSHAD HHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCH QRAAHDAPSAHIHAHGFRWRTLIVGLMHGMAGSAALLVLAVSQAQSPTQGLLYVALFGVG HHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH SMVGMGALSAAIAVPLVISARGLTAVNRGLQIAVGVLTIAIGLHTIQSTLLS HHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8288539 [H]