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The map label for this gene is dksA [H]

Identifier: 86750901

GI number: 86750901

Start: 4328495

End: 4328917

Strand: Reverse

Name: dksA [H]

Synonym: RPB_3792

Alternate gene names: 86750901

Gene position: 4328917-4328495 (Counterclockwise)

Preceding gene: 86750902

Following gene: 86750894

Centisome position: 81.19

GC content: 58.87

Gene sequence:

>423_bases
ATGGATTGCCCCTTGGATAAGTTGAAAACCTATCGACCCTCCGAGAAAGAGCCGTTCATGAATGAACGGCAGCGCGAGTA
TTTTCGTGCCAAGCTATTGGCCTGGAAGGACGAGATTTTGCGCGAAGCAAAACTCACGCTCCAGACCCTCCAGGAAGAAA
ACGTCAATCATCCCGACCTGGCCGATCGCGCCTCGTCGGAAACCGACCGCGCCATCGAACTGCGTGCGCGCGATCGGCAG
CGCAAGCTGATCTCCAAGATCGACGCTGCACTGCAGCGCATCGACGACAACACCTACGGCTATTGCGAAGAAACCGGCGA
GCCGATTTCGCTGAAGCGGCTCGAAGCCCGCCCGATCGCCACGCTGTCGGTCGAAGCCCAGGAGCGCCACGAGAAGCGCG
AGAAGGTCTATCGCGACGAGTAG

Upstream 100 bases:

>100_bases
GTGCGGCGGGCGCGAAGCCGGCGGCGGACGATATTGTCTGTCATCTGCGCGCGCTATATAAGCTGCCGCGCAGGCGGGGC
TATTGCCGCCCAACAAGATC

Downstream 100 bases:

>100_bases
TTGCGGTGCGCTTCTTGGCACTTCAATCGCGAAAGCGAAGCGGGCCTCGTGCCCGCTATTTTTTTGTCAGAGAGAGGCGG
GCCTCGTGCCCGCTTTTTTG

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MDCPLDKLKTYRPSEKEPFMNERQREYFRAKLLAWKDEILREAKLTLQTLQEENVNHPDLADRASSETDRAIELRARDRQ
RKLISKIDAALQRIDDNTYGYCEETGEPISLKRLEARPIATLSVEAQERHEKREKVYRDE

Sequences:

>Translated_140_residues
MDCPLDKLKTYRPSEKEPFMNERQREYFRAKLLAWKDEILREAKLTLQTLQEENVNHPDLADRASSETDRAIELRARDRQ
RKLISKIDAALQRIDDNTYGYCEETGEPISLKRLEARPIATLSVEAQERHEKREKVYRDE
>Mature_140_residues
MDCPLDKLKTYRPSEKEPFMNERQREYFRAKLLAWKDEILREAKLTLQTLQEENVNHPDLADRASSETDRAIELRARDRQ
RKLISKIDAALQRIDDNTYGYCEETGEPISLKRLEARPIATLSVEAQERHEKREKVYRDE

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1786338, Length=128, Percent_Identity=42.1875, Blast_Score=107, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 16634; Mature: 16634

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDCPLDKLKTYRPSEKEPFMNERQREYFRAKLLAWKDEILREAKLTLQTLQEENVNHPDL
CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ADRASSETDRAIELRARDRQRKLISKIDAALQRIDDNTYGYCEETGEPISLKRLEARPIA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCE
TLSVEAQERHEKREKVYRDE
EEECHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDCPLDKLKTYRPSEKEPFMNERQREYFRAKLLAWKDEILREAKLTLQTLQEENVNHPDL
CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ADRASSETDRAIELRARDRQRKLISKIDAALQRIDDNTYGYCEETGEPISLKRLEARPIA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCE
TLSVEAQERHEKREKVYRDE
EEECHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9555902 [H]