Click here to switch to the map view.

The map label for this gene is fliQ [H]

Identifier: 86750883

GI number: 86750883

Start: 4310152

End: 4310415

Strand: Reverse

Name: fliQ [H]

Synonym: RPB_3774

Alternate gene names: 86750883

Gene position: 4310415-4310152 (Counterclockwise)

Preceding gene: 86750884

Following gene: 162138518

Centisome position: 80.85

GC content: 62.88

Gene sequence:

>264_bases
ATGACCGGTGCTGAAACTCTCGATATCGCCCGCGAAGCGGTCTGGACGATCGTGATCGTCTCGGCACCGCTGATGGTGGT
CGGCCTGGTCGTCGGCGTGGCGGTGTCGCTGGTCCAGGCGCTGACCCAGATCCAGGAACAGACGCTGGTGTTCGTCCCGA
AGATTCTGGCGATGTTCCTCACCTTGGTGCTGACGCTGCCGTTCATGGCCGACCGGCTGCACGCCGAAATGCTGCGGATC
TCATCGCGAATCGTCGGCGGTTGA

Upstream 100 bases:

>100_bases
AGCGAAGCGAAGCAATCCAGGACAAATTGGTGAAGCATCTGGATTGCTTCGTCGCTGCGCTGCTCGCAATGACGCCACAC
TGTAACGAAGGATCTCCAAT

Downstream 100 bases:

>100_bases
CGCATGATCGGAGCCCGTGCCACCGGCCGGTGCGTGGGGGGCGTGGCGGTTCGCCGCGACGCCGGCGCGGCCACATCCGG
TCCTGACGCAGTTTCTCGCC

Product: flagellar biosynthesis protein FliQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MTGAETLDIAREAVWTIVIVSAPLMVVGLVVGVAVSLVQALTQIQEQTLVFVPKILAMFLTLVLTLPFMADRLHAEMLRI
SSRIVGG

Sequences:

>Translated_87_residues
MTGAETLDIAREAVWTIVIVSAPLMVVGLVVGVAVSLVQALTQIQEQTLVFVPKILAMFLTLVLTLPFMADRLHAEMLRI
SSRIVGG
>Mature_86_residues
TGAETLDIAREAVWTIVIVSAPLMVVGLVVGVAVSLVQALTQIQEQTLVFVPKILAMFLTLVLTLPFMADRLHAEMLRIS
SRIVGG

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1987

COG function: function code NU; Flagellar biosynthesis pathway, component FliQ

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliQ/MopD/SpaQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002191
- InterPro:   IPR006305 [H]

Pfam domain/function: PF01313 Bac_export_3 [H]

EC number: NA

Molecular weight: Translated: 9375; Mature: 9243

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGAETLDIAREAVWTIVIVSAPLMVVGLVVGVAVSLVQALTQIQEQTLVFVPKILAMFL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLVLTLPFMADRLHAEMLRISSRIVGG
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TGAETLDIAREAVWTIVIVSAPLMVVGLVVGVAVSLVQALTQIQEQTLVFVPKILAMFL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLVLTLPFMADRLHAEMLRISSRIVGG
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7814323; 11259647 [H]