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The map label for this gene is flhB [H]

Identifier: 86750881

GI number: 86750881

Start: 4308181

End: 4309257

Strand: Reverse

Name: flhB [H]

Synonym: RPB_3772

Alternate gene names: 86750881

Gene position: 4309257-4308181 (Counterclockwise)

Preceding gene: 162138518

Following gene: 86750880

Centisome position: 80.82

GC content: 64.53

Gene sequence:

>1077_bases
ATGTCGGACGACAGCGACCAGGAGAAACAAGAGGAGCCGACACAGAAACGCCTCGACGACGCGCTCGAGAAAGGCGACGT
CGCCAAGAGTCAGGAGGTCAACACCTGGTTCGCGATCGCCGGCGCCACCCTGCTGCTGTCGTCGTTTTCGGGGTCGATCG
GCTCCGGCATCACCGGGCCGATGCGGACGCTGATCGAGAAATCGTGGATGCTGCCGGTCGACGGCGTGGGCCTGCTGGCG
CTGACCAAGAGTCTGCTGCTGATGCTGATCTCGGTTCTCGGCGTTCCGCTGGGGCTGCTGGCGCTGGTCGCGATCGGAAG
CAATCTGATCCAGCATCGGCTGGTGTTCTCCACCGAGGGGCTGAAGCCGAAATTCAGCAAGCTGTCGCCGCTCGAGGGCG
CCAAGCGGCTGTTCGGCAAGCAGGCGCTGGCGAATTTCCTCAAGGGCCTGTTCAAGGTGATCGCGCTCGGCGTGGTGATG
GTCGCGGTGCTGTATCCGGAGCGCGACCGGCTCGACGCGCTGCTGCAAATGGACGTCGTGTCGTTGCTCGGCGTCACGGT
GTCGCTGACGCTGAAACTGATGGGCACGGTGGCGGCGGTGCTCGCCTTCGTCGCCGCCGGCGATTTCTTCTTCCAGTATC
ACACCTGGCGCGAGCGGCAGAAGATGTCGCTGCAGGAGGTCAAGGACGAATACAAGCAGTCGGAAGGCGACCCGCACATC
AAGGGCCGCATCCGGCAGATCCGCTATCAGCGGATGAAGAAGCGGATGATGGCGGCGGTGCCGGGCGCCTCCGTGGTCAT
CACCAACCCGACCCACTTCTCGGTGGCGCTGAAATACGAGCGCGGCATGCAGGCGCCGATCTGCGTCGCCAAGGGCGCCG
ACGCGATCGCGTTCAAGATCAGGGAAGTGGCGAAGGCGAACGACGTGCCGATCGTCGAAAACGTTCCCCTGGCGCGCGCG
CTGTTCGCCACCGTCGAGGTCGACGAGGAGATTCCGGTCGAACACTACCACGCCGTCGCCGAGGTGATCGGCTATGTCAT
GAACCTGCGGCGACGCTTCGGCGGACGGCGGACCTAG

Upstream 100 bases:

>100_bases
CCGTGCTGACGACGATGATGGGCACGTTTCTCGCCTATTTCGGCGGCGTCATGCAGGAATTGACGCCTCGCTGAGCCCGA
TCGCGCAGGATAGCTGAGCG

Downstream 100 bases:

>100_bases
GCGGTGGCGATGCCCGGGCCAGCCGATGTGGGTGAGCGGATTTTCCGGAGTTGCGGCTCCGATCGCGCCCTTCCGGCCGG
TCGGGGGAGGCGCGGGGACA

Product: flagellar biosynthesis protein FlhB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MSDDSDQEKQEEPTQKRLDDALEKGDVAKSQEVNTWFAIAGATLLLSSFSGSIGSGITGPMRTLIEKSWMLPVDGVGLLA
LTKSLLLMLISVLGVPLGLLALVAIGSNLIQHRLVFSTEGLKPKFSKLSPLEGAKRLFGKQALANFLKGLFKVIALGVVM
VAVLYPERDRLDALLQMDVVSLLGVTVSLTLKLMGTVAAVLAFVAAGDFFFQYHTWRERQKMSLQEVKDEYKQSEGDPHI
KGRIRQIRYQRMKKRMMAAVPGASVVITNPTHFSVALKYERGMQAPICVAKGADAIAFKIREVAKANDVPIVENVPLARA
LFATVEVDEEIPVEHYHAVAEVIGYVMNLRRRFGGRRT

Sequences:

>Translated_358_residues
MSDDSDQEKQEEPTQKRLDDALEKGDVAKSQEVNTWFAIAGATLLLSSFSGSIGSGITGPMRTLIEKSWMLPVDGVGLLA
LTKSLLLMLISVLGVPLGLLALVAIGSNLIQHRLVFSTEGLKPKFSKLSPLEGAKRLFGKQALANFLKGLFKVIALGVVM
VAVLYPERDRLDALLQMDVVSLLGVTVSLTLKLMGTVAAVLAFVAAGDFFFQYHTWRERQKMSLQEVKDEYKQSEGDPHI
KGRIRQIRYQRMKKRMMAAVPGASVVITNPTHFSVALKYERGMQAPICVAKGADAIAFKIREVAKANDVPIVENVPLARA
LFATVEVDEEIPVEHYHAVAEVIGYVMNLRRRFGGRRT
>Mature_357_residues
SDDSDQEKQEEPTQKRLDDALEKGDVAKSQEVNTWFAIAGATLLLSSFSGSIGSGITGPMRTLIEKSWMLPVDGVGLLAL
TKSLLLMLISVLGVPLGLLALVAIGSNLIQHRLVFSTEGLKPKFSKLSPLEGAKRLFGKQALANFLKGLFKVIALGVVMV
AVLYPERDRLDALLQMDVVSLLGVTVSLTLKLMGTVAAVLAFVAAGDFFFQYHTWRERQKMSLQEVKDEYKQSEGDPHIK
GRIRQIRYQRMKKRMMAAVPGASVVITNPTHFSVALKYERGMQAPICVAKGADAIAFKIREVAKANDVPIVENVPLARAL
FATVEVDEEIPVEHYHAVAEVIGYVMNLRRRFGGRRT

Specific function: May be involved in the export of flagellum proteins [H]

COG id: COG1377

COG function: function code NU; Flagellar biosynthesis pathway, component FlhB

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type III secretion exporter family [H]

Homologues:

Organism=Escherichia coli, GI1788188, Length=372, Percent_Identity=38.7096774193548, Blast_Score=204, Evalue=5e-54,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006136
- InterPro:   IPR006135 [H]

Pfam domain/function: PF01312 Bac_export_2 [H]

EC number: NA

Molecular weight: Translated: 39378; Mature: 39247

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDSDQEKQEEPTQKRLDDALEKGDVAKSQEVNTWFAIAGATLLLSSFSGSIGSGITGP
CCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHH
MRTLIEKSWMLPVDGVGLLALTKSLLLMLISVLGVPLGLLALVAIGSNLIQHRLVFSTEG
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LKPKFSKLSPLEGAKRLFGKQALANFLKGLFKVIALGVVMVAVLYPERDRLDALLQMDVV
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SLLGVTVSLTLKLMGTVAAVLAFVAAGDFFFQYHTWRERQKMSLQEVKDEYKQSEGDPHI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
KGRIRQIRYQRMKKRMMAAVPGASVVITNPTHFSVALKYERGMQAPICVAKGADAIAFKI
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCCCEEEECCCHHHHHHH
REVAKANDVPIVENVPLARALFATVEVDEEIPVEHYHAVAEVIGYVMNLRRRFGGRRT
HHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SDDSDQEKQEEPTQKRLDDALEKGDVAKSQEVNTWFAIAGATLLLSSFSGSIGSGITGP
CCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHH
MRTLIEKSWMLPVDGVGLLALTKSLLLMLISVLGVPLGLLALVAIGSNLIQHRLVFSTEG
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LKPKFSKLSPLEGAKRLFGKQALANFLKGLFKVIALGVVMVAVLYPERDRLDALLQMDVV
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SLLGVTVSLTLKLMGTVAAVLAFVAAGDFFFQYHTWRERQKMSLQEVKDEYKQSEGDPHI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
KGRIRQIRYQRMKKRMMAAVPGASVVITNPTHFSVALKYERGMQAPICVAKGADAIAFKI
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCCCEEEECCCHHHHHHH
REVAKANDVPIVENVPLARALFATVEVDEEIPVEHYHAVAEVIGYVMNLRRRFGGRRT
HHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8299954; 9384377 [H]