| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750878
Identifier: 86750878
GI number: 86750878
Start: 4303433
End: 4304413
Strand: Reverse
Name: 86750878
Synonym: RPB_3769
Alternate gene names: NA
Gene position: 4304413-4303433 (Counterclockwise)
Preceding gene: 86750880
Following gene: 86750877
Centisome position: 80.73
GC content: 67.28
Gene sequence:
>981_bases ATGCCTCAACTGTCCCGCCGTAGCTTCGCCAGTGGCCTTCTCGGAGGGAGCCTCCTGGGAGGCGGCCTGATCGGTGGCGG TCTGGCGCCAGTCCAGGCCAAGACCCAGGCTGCTGCGACCGCGCCGGTCAGCGTGACTCCGCTGGCGCAGATCAAGATCG GCCGCTTCACCGTGACGGCGCTGACCGACGGCTATGCGGACATGCCCTACACCTTCTTCCCCGGCCGCTCGGCCGACCAG GTCGAGCAGGCCGCGGTGGCGCAGCACACGGCGCGAGCGAGCGGTGTGCGGTTTCTGTTCAACCAGTACCTGGTGGAAGA CGGCGAGCGCCGCATTCTGATCGATGCCGGACCGGCCGGATCGATCGGGCAGACCGGCGCGCTGCCGCAGGCGCTCGGCG CCCTCGGCCTGCGGCGCGACCAGATCGACGCAGTGATCGTGACGCATATGCATCAGGATCACATGGGCGGACTGATCGTC GACGGTCGGATGAACTATCCCAAGGCGGAGCTCTATATCGATCGCCGCGACGTCAAACACTGGACCGACCCGGCGAAGGC GAACGGCGCACCGGATTATCTGCAGACCAGCTTCCGCATGGCGGGCGAGGTCGTGCGCCTCTACCCGAAACTGCAGGCGA TCGACGGCGAGCGTGAGATCGTGCGCGGCGTCTCGATCGTCGATCTGACGGGACATACGCCGGGCCATATCGGGGTGCGC ATCGAGGACGGCGGCCAAAGCCTGATCATGGTCTCCGATATGATTTTTCCGGTGGTGCATCCGGTGGCGACGGACGTGTT CTTCCTGTTCGAGCAGGACCGCGCCGCGGCCCAGGCGATGCGGGATCGCTTCTTTCCGCGTGCCGCGTCCGAAGGCGCGC TGATCGCCGCGACCCATATGCCGTTCCCGGGGCTCGGCCGCATCGTGGCCGACCGGGGGCAATTGCGCTGGCAGGTGGCC GACTGGGCGTTGCAGCTCTGA
Upstream 100 bases:
>100_bases ACAGCAAGATACCCCGTCGATTTTGGATGTCCTAACATTCTTCGAAACGGACGGCCGACGGGCTTTTTCCGCATGTCCAA CGTCGCAAGAGAGAGCGCCA
Downstream 100 bases:
>100_bases ATACGGCCATTGGTTGATCCCGCGACCGAGGGCCGCAGGCTTGCGACGGCCCTGCGACGCTGAGAAGGCTTCCAATTTAG GCAGCGCTGCCCATTTTAGC
Product: Beta-lactamase-like
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase-Like; Twin-Arginine Translocation Pathway Signal; Zn-Dependent Hydrolase; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase; Metal Dependent Hydrolase; Methyl Parathion Hydrolase; Beta-Lactamase Family Protein; Hydrolase; Beta-Lactamase Superfamily Hydrolase; Metallo-Hydrolase Protein; Metallo-Beta-Lactamase Superfamily; Beta-Lactamase; Zn-Dependent Beta-Lactamase Domain Hydrolase; Beta-Lactamase/Hydrolase; Metal-Dependent Hydrolase; Organophosphate Pesticide Hydrolase; Signal Peptide; Beta-Lactamase-Like Zn-Dependent Hydrolase Protein; Metallo-Beta-Lactamase Domain-Containing Protein; GloB Protein; Metallo-Beta-Lactamase Family Methyl Parathion Hydrolase; Signal Peptide Protein; Metall Dependent Hydrolase; Zn-Dependent Hydrolase Including Glyoxylase
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MPQLSRRSFASGLLGGSLLGGGLIGGGLAPVQAKTQAAATAPVSVTPLAQIKIGRFTVTALTDGYADMPYTFFPGRSADQ VEQAAVAQHTARASGVRFLFNQYLVEDGERRILIDAGPAGSIGQTGALPQALGALGLRRDQIDAVIVTHMHQDHMGGLIV DGRMNYPKAELYIDRRDVKHWTDPAKANGAPDYLQTSFRMAGEVVRLYPKLQAIDGEREIVRGVSIVDLTGHTPGHIGVR IEDGGQSLIMVSDMIFPVVHPVATDVFFLFEQDRAAAQAMRDRFFPRAASEGALIAATHMPFPGLGRIVADRGQLRWQVA DWALQL
Sequences:
>Translated_326_residues MPQLSRRSFASGLLGGSLLGGGLIGGGLAPVQAKTQAAATAPVSVTPLAQIKIGRFTVTALTDGYADMPYTFFPGRSADQ VEQAAVAQHTARASGVRFLFNQYLVEDGERRILIDAGPAGSIGQTGALPQALGALGLRRDQIDAVIVTHMHQDHMGGLIV DGRMNYPKAELYIDRRDVKHWTDPAKANGAPDYLQTSFRMAGEVVRLYPKLQAIDGEREIVRGVSIVDLTGHTPGHIGVR IEDGGQSLIMVSDMIFPVVHPVATDVFFLFEQDRAAAQAMRDRFFPRAASEGALIAATHMPFPGLGRIVADRGQLRWQVA DWALQL >Mature_325_residues PQLSRRSFASGLLGGSLLGGGLIGGGLAPVQAKTQAAATAPVSVTPLAQIKIGRFTVTALTDGYADMPYTFFPGRSADQV EQAAVAQHTARASGVRFLFNQYLVEDGERRILIDAGPAGSIGQTGALPQALGALGLRRDQIDAVIVTHMHQDHMGGLIVD GRMNYPKAELYIDRRDVKHWTDPAKANGAPDYLQTSFRMAGEVVRLYPKLQAIDGEREIVRGVSIVDLTGHTPGHIGVRI EDGGQSLIMVSDMIFPVVHPVATDVFFLFEQDRAAAQAMRDRFFPRAASEGALIAATHMPFPGLGRIVADRGQLRWQVAD WALQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35104; Mature: 34972
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQLSRRSFASGLLGGSLLGGGLIGGGLAPVQAKTQAAATAPVSVTPLAQIKIGRFTVTA CCCCCHHHHHHHHHCCHHHCCCHHCCCCCCCCHHHHHHCCCCCEECCEEEEEECEEEEEE LTDGYADMPYTFFPGRSADQVEQAAVAQHTARASGVRFLFNQYLVEDGERRILIDAGPAG EECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC SIGQTGALPQALGALGLRRDQIDAVIVTHMHQDHMGGLIVDGRMNYPKAELYIDRRDVKH CCCCCCCCHHHHHHHCCCHHHHCEEEEEECCCCCCCCEEEECCCCCCCEEEEEEHHHCCC WTDPAKANGAPDYLQTSFRMAGEVVRLYPKLQAIDGEREIVRGVSIVDLTGHTPGHIGVR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEECCCCCCEEEEE IEDGGQSLIMVSDMIFPVVHPVATDVFFLFEQDRAAAQAMRDRFFPRAASEGALIAATHM EECCCCEEEEEHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHCCCCCCCCCCEEEEECC PFPGLGRIVADRGQLRWQVADWALQL CCCCCCHHHCCCCCEEEEEEEEEECC >Mature Secondary Structure PQLSRRSFASGLLGGSLLGGGLIGGGLAPVQAKTQAAATAPVSVTPLAQIKIGRFTVTA CCCCHHHHHHHHHCCHHHCCCHHCCCCCCCCHHHHHHCCCCCEECCEEEEEECEEEEEE LTDGYADMPYTFFPGRSADQVEQAAVAQHTARASGVRFLFNQYLVEDGERRILIDAGPAG EECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC SIGQTGALPQALGALGLRRDQIDAVIVTHMHQDHMGGLIVDGRMNYPKAELYIDRRDVKH CCCCCCCCHHHHHHHCCCHHHHCEEEEEECCCCCCCCEEEECCCCCCCEEEEEEHHHCCC WTDPAKANGAPDYLQTSFRMAGEVVRLYPKLQAIDGEREIVRGVSIVDLTGHTPGHIGVR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEECCCCCCEEEEE IEDGGQSLIMVSDMIFPVVHPVATDVFFLFEQDRAAAQAMRDRFFPRAASEGALIAATHM EECCCCEEEEEHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHCCCCCCCCCCEEEEECC PFPGLGRIVADRGQLRWQVADWALQL CCCCCCHHHCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA