| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is crp [C]
Identifier: 86750858
GI number: 86750858
Start: 4286487
End: 4287173
Strand: Reverse
Name: crp [C]
Synonym: RPB_3749
Alternate gene names: 86750858
Gene position: 4287173-4286487 (Counterclockwise)
Preceding gene: 86750859
Following gene: 86750853
Centisome position: 80.41
GC content: 61.72
Gene sequence:
>687_bases GTGAATTCCAACGAAGCGGCGTTCGATCCCACCGCGTTTCTCGGCAGCGCTGGACCGGGCCGGTCCATACAGCAATTCCG CAAGAACCAGAGCATTTTCGCGCAAGGCGACAAGGCCGACAGCGTGCTGTTTCTTCAGCATGGTCGCGTCAAGCTGGTGG TGATGTCGGAGCAGGGCAAAGAGGGCGTCGTCGCGATCCTTGAATCGGGGCAGTTCTTGGGCGAGAGCGCGCTGATCGGC CGGCGGCGCCTGTCCACCGCGGTGGCGCTCGAGGACTGCATCGTCACCACGCTGACCAACACGGTGCTGATCGCGACGCT GCAGCGCGAGCCCGGCATGTGCGAGTTCTTCATGACTCACCTGCTCAGGCGCAATTGCCGCGTCGAGGAGGATTTGATCG ATCAGTTGTTCAATTCCAGCGAGAAGCGCCTGGCACGACTGTTACTTCTGCTCGCTGATTTCCACCCGGGCGACACCGCC AAATCGCTGCCTGTCGATGTCAGCCAGGAGACTCTGGCGGAGATGATCGGCACGACGCGATCGCGCGTCAGTCACTTCAT GAACAAGTTCCGCAAGCTCGGCTTCATCGACTACAACGGCCACATCGAAGTGTATCCGTCGCTACGCAGCGCTGTGTCGC CGGACAAGGCGCGGCTGCCCGAAGGCGATGCGCGGCCTTTCGACTGA
Upstream 100 bases:
>100_bases TGGAAATTGATGTTGATGGACCGACGCGGCGAGTGTTTCGCCGCGCGGCTCTTCCAGCGATCGATGGCGGAGGGCTTGCT CCGCGATTGCAGGATGAGAC
Downstream 100 bases:
>100_bases ACGGCCGGATGGCGATCGCCGAAGCGACCGGTGGGCGGTGCGACCCCGCTCAGCCCCTGTCGCCGAGCAGCCGGCCCGAC GAGCGATTGATGAAATGCAC
Product: Crp/FNR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator Crp/Fnr Family; CRP/FNR Family Transcriptional Regulator; Crp Family Transcriptional Regulator; Transcriptional Regulator; Response Regulator Receiver; Crp/Fnr Family Transcriptional Regulator; CAMP Receptor Protein; CAMP-Regulatory Protein; Cyclic-AMP Receptor-Like Protein
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MNSNEAAFDPTAFLGSAGPGRSIQQFRKNQSIFAQGDKADSVLFLQHGRVKLVVMSEQGKEGVVAILESGQFLGESALIG RRRLSTAVALEDCIVTTLTNTVLIATLQREPGMCEFFMTHLLRRNCRVEEDLIDQLFNSSEKRLARLLLLLADFHPGDTA KSLPVDVSQETLAEMIGTTRSRVSHFMNKFRKLGFIDYNGHIEVYPSLRSAVSPDKARLPEGDARPFD
Sequences:
>Translated_228_residues MNSNEAAFDPTAFLGSAGPGRSIQQFRKNQSIFAQGDKADSVLFLQHGRVKLVVMSEQGKEGVVAILESGQFLGESALIG RRRLSTAVALEDCIVTTLTNTVLIATLQREPGMCEFFMTHLLRRNCRVEEDLIDQLFNSSEKRLARLLLLLADFHPGDTA KSLPVDVSQETLAEMIGTTRSRVSHFMNKFRKLGFIDYNGHIEVYPSLRSAVSPDKARLPEGDARPFD >Mature_228_residues MNSNEAAFDPTAFLGSAGPGRSIQQFRKNQSIFAQGDKADSVLFLQHGRVKLVVMSEQGKEGVVAILESGQFLGESALIG RRRLSTAVALEDCIVTTLTNTVLIATLQREPGMCEFFMTHLLRRNCRVEEDLIDQLFNSSEKRLARLLLLLADFHPGDTA KSLPVDVSQETLAEMIGTTRSRVSHFMNKFRKLGFIDYNGHIEVYPSLRSAVSPDKARLPEGDARPFD
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25300; Mature: 25300
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSNEAAFDPTAFLGSAGPGRSIQQFRKNQSIFAQGDKADSVLFLQHGRVKLVVMSEQGK CCCCCCCCCCHHHHCCCCCCHHHHHHHCCCCEEECCCCCCCEEEEECCCEEEEEECCCCC EGVVAILESGQFLGESALIGRRRLSTAVALEDCIVTTLTNTVLIATLQREPGMCEFFMTH CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHH LLRRNCRVEEDLIDQLFNSSEKRLARLLLLLADFHPGDTAKSLPVDVSQETLAEMIGTTR HHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCHH SRVSHFMNKFRKLGFIDYNGHIEVYPSLRSAVSPDKARLPEGDARPFD HHHHHHHHHHHHCCCEEECCCEEEEECHHHHCCCCHHCCCCCCCCCCC >Mature Secondary Structure MNSNEAAFDPTAFLGSAGPGRSIQQFRKNQSIFAQGDKADSVLFLQHGRVKLVVMSEQGK CCCCCCCCCCHHHHCCCCCCHHHHHHHCCCCEEECCCCCCCEEEEECCCEEEEEECCCCC EGVVAILESGQFLGESALIGRRRLSTAVALEDCIVTTLTNTVLIATLQREPGMCEFFMTH CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHH LLRRNCRVEEDLIDQLFNSSEKRLARLLLLLADFHPGDTAKSLPVDVSQETLAEMIGTTR HHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCHH SRVSHFMNKFRKLGFIDYNGHIEVYPSLRSAVSPDKARLPEGDARPFD HHHHHHHHHHHHCCCEEECCCEEEEECHHHHCCCCHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA