Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is yxeI [H]

Identifier: 86750607

GI number: 86750607

Start: 4002275

End: 4003342

Strand: Direct

Name: yxeI [H]

Synonym: RPB_3497

Alternate gene names: 86750607

Gene position: 4002275-4003342 (Clockwise)

Preceding gene: 86750590

Following gene: 86750610

Centisome position: 75.07

GC content: 65.26

Gene sequence:

>1068_bases
ATGATTGCATTCAGGCGTCGTTTCGTGACCGTCTCCATCGCCGCACTGCTTGCCAGCGGCGCCCTGCTCGCGCCCGCTGC
GAAAGCCTGCACCCGCCTGGTCTATCTCGGCGCCGGCGATCAGGTGATCACCGCGCGCTCGATGGACTGGGCGCGCGACA
TCGGCACCAATCTCTGGATCTTCCCGCGCGGCATCAAGCGCTCCGGCGAGGCCGGGCCGAATTCGGCACAATGGACCGCG
CGCTACGGCAGCGTGATCGCCTCGGCCTACGACATCGCGACCTCGGACGGCGTCAACGAGGCCGGCCTGGTGGCCAACGT
GCTGTGGCTGGCGGAATCGACCTATCCGAAGCTCGACGGCGGCAGGCCCGGCCTCGCGCTGTCGCTGTGGCCGCAATACG
TGCTCGACAATTTCGCCAATGTGCAGGAGGCGGTCGCGGCGCTGGCGAAGGAACCGTTCACCGTGGTCACTGCGCAACTC
CCCGACGAGAACCGGCTGGCGACCGTGCACCTGTCGCTGTCGGACAAAAGCGGCGATAGCGCCATCATCGAATATATCGA
CGGCAAGCAGGTGATCCATCACGGCCGGCAGTATCAGGTGATGACCAATTCGCCGACCTTCGATCAGCAGCTCGCGCTCA
ACGCCTACTGGAAGCAGATCGGCGGCACCGTGATGCTGCCGGGCACCAACCGCGCCGCGGACCGCTTCGCCCGCGCCTCG
TTCTATGTCGATGCGATCCCGAAAGCGGAGAATCCGGTCGAAGCCATCGCCAGCGTGTTCGGCGTGATCCGCAACGCCTC
GGTGCCCTACGGCATCACCACGCCCGACCAGCCGAACATCTCCTCGACGCGCTGGCGCACCGTGGTCGATCACAAGCGCA
AACTGTACTTCTTCGAATCCGCGCTGACCCCGAACGTGTTCTGGGTCGACCTGACCAAAATCGACTTCTCGGCCGACAAG
GGCACGGTGCAGAAGCTCGACCTCGGCCCCGGCCAGAGCAACACCTTCTCCGGCGAGGTCCACGACCGCTTCAGGCCGAG
CGAGCCGTTCAAGTTTCTCGGGCTGTGA

Upstream 100 bases:

>100_bases
CAAGCTCGGCGACGCGGTCCCGCGATCTTGAACGATCGGTATTTCACATGTCGGGTCGGCCCAGCTCATTCAGACAGATC
CAGCCATCGGAGCCACAGCC

Downstream 100 bases:

>100_bases
GGCGGAGCGGGACGGTCACTAGAGCGGTTCATCGCTTGACTGAAGCCACGCCGCATTCTCGCGTACGGCGTCGTCATCCT
GAGGTGCGAGCGCAGCGAGC

Product: choloylglycine hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MIAFRRRFVTVSIAALLASGALLAPAAKACTRLVYLGAGDQVITARSMDWARDIGTNLWIFPRGIKRSGEAGPNSAQWTA
RYGSVIASAYDIATSDGVNEAGLVANVLWLAESTYPKLDGGRPGLALSLWPQYVLDNFANVQEAVAALAKEPFTVVTAQL
PDENRLATVHLSLSDKSGDSAIIEYIDGKQVIHHGRQYQVMTNSPTFDQQLALNAYWKQIGGTVMLPGTNRAADRFARAS
FYVDAIPKAENPVEAIASVFGVIRNASVPYGITTPDQPNISSTRWRTVVDHKRKLYFFESALTPNVFWVDLTKIDFSADK
GTVQKLDLGPGQSNTFSGEVHDRFRPSEPFKFLGL

Sequences:

>Translated_355_residues
MIAFRRRFVTVSIAALLASGALLAPAAKACTRLVYLGAGDQVITARSMDWARDIGTNLWIFPRGIKRSGEAGPNSAQWTA
RYGSVIASAYDIATSDGVNEAGLVANVLWLAESTYPKLDGGRPGLALSLWPQYVLDNFANVQEAVAALAKEPFTVVTAQL
PDENRLATVHLSLSDKSGDSAIIEYIDGKQVIHHGRQYQVMTNSPTFDQQLALNAYWKQIGGTVMLPGTNRAADRFARAS
FYVDAIPKAENPVEAIASVFGVIRNASVPYGITTPDQPNISSTRWRTVVDHKRKLYFFESALTPNVFWVDLTKIDFSADK
GTVQKLDLGPGQSNTFSGEVHDRFRPSEPFKFLGL
>Mature_355_residues
MIAFRRRFVTVSIAALLASGALLAPAAKACTRLVYLGAGDQVITARSMDWARDIGTNLWIFPRGIKRSGEAGPNSAQWTA
RYGSVIASAYDIATSDGVNEAGLVANVLWLAESTYPKLDGGRPGLALSLWPQYVLDNFANVQEAVAALAKEPFTVVTAQL
PDENRLATVHLSLSDKSGDSAIIEYIDGKQVIHHGRQYQVMTNSPTFDQQLALNAYWKQIGGTVMLPGTNRAADRFARAS
FYVDAIPKAENPVEAIASVFGVIRNASVPYGITTPDQPNISSTRWRTVVDHKRKLYFFESALTPNVFWVDLTKIDFSADK
GTVQKLDLGPGQSNTFSGEVHDRFRPSEPFKFLGL

Specific function: Unknown

COG id: COG3049

COG function: function code M; Penicillin V acylase and related amidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C59 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003199 [H]

Pfam domain/function: PF02275 CBAH [H]

EC number: NA

Molecular weight: Translated: 38771; Mature: 38771

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAFRRRFVTVSIAALLASGALLAPAAKACTRLVYLGAGDQVITARSMDWARDIGTNLWI
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEECCCCCEEEECCCHHHHHCCCCEEE
FPRGIKRSGEAGPNSAQWTARYGSVIASAYDIATSDGVNEAGLVANVLWLAESTYPKLDG
EECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCC
GRPGLALSLWPQYVLDNFANVQEAVAALAKEPFTVVTAQLPDENRLATVHLSLSDKSGDS
CCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEECCCCCCC
AIIEYIDGKQVIHHGRQYQVMTNSPTFDQQLALNAYWKQIGGTVMLPGTNRAADRFARAS
EEEEECCCHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHH
FYVDAIPKAENPVEAIASVFGVIRNASVPYGITTPDQPNISSTRWRTVVDHKRKLYFFES
EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEC
ALTPNVFWVDLTKIDFSADKGTVQKLDLGPGQSNTFSGEVHDRFRPSEPFKFLGL
CCCCCEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIAFRRRFVTVSIAALLASGALLAPAAKACTRLVYLGAGDQVITARSMDWARDIGTNLWI
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEECCCCCEEEECCCHHHHHCCCCEEE
FPRGIKRSGEAGPNSAQWTARYGSVIASAYDIATSDGVNEAGLVANVLWLAESTYPKLDG
EECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCC
GRPGLALSLWPQYVLDNFANVQEAVAALAKEPFTVVTAQLPDENRLATVHLSLSDKSGDS
CCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEECCCCCCC
AIIEYIDGKQVIHHGRQYQVMTNSPTFDQQLALNAYWKQIGGTVMLPGTNRAADRFARAS
EEEEECCCHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHH
FYVDAIPKAENPVEAIASVFGVIRNASVPYGITTPDQPNISSTRWRTVVDHKRKLYFFES
EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEC
ALTPNVFWVDLTKIDFSADKGTVQKLDLGPGQSNTFSGEVHDRFRPSEPFKFLGL
CCCCCEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377 [H]