| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is yxeI [H]
Identifier: 86750607
GI number: 86750607
Start: 4002275
End: 4003342
Strand: Direct
Name: yxeI [H]
Synonym: RPB_3497
Alternate gene names: 86750607
Gene position: 4002275-4003342 (Clockwise)
Preceding gene: 86750590
Following gene: 86750610
Centisome position: 75.07
GC content: 65.26
Gene sequence:
>1068_bases ATGATTGCATTCAGGCGTCGTTTCGTGACCGTCTCCATCGCCGCACTGCTTGCCAGCGGCGCCCTGCTCGCGCCCGCTGC GAAAGCCTGCACCCGCCTGGTCTATCTCGGCGCCGGCGATCAGGTGATCACCGCGCGCTCGATGGACTGGGCGCGCGACA TCGGCACCAATCTCTGGATCTTCCCGCGCGGCATCAAGCGCTCCGGCGAGGCCGGGCCGAATTCGGCACAATGGACCGCG CGCTACGGCAGCGTGATCGCCTCGGCCTACGACATCGCGACCTCGGACGGCGTCAACGAGGCCGGCCTGGTGGCCAACGT GCTGTGGCTGGCGGAATCGACCTATCCGAAGCTCGACGGCGGCAGGCCCGGCCTCGCGCTGTCGCTGTGGCCGCAATACG TGCTCGACAATTTCGCCAATGTGCAGGAGGCGGTCGCGGCGCTGGCGAAGGAACCGTTCACCGTGGTCACTGCGCAACTC CCCGACGAGAACCGGCTGGCGACCGTGCACCTGTCGCTGTCGGACAAAAGCGGCGATAGCGCCATCATCGAATATATCGA CGGCAAGCAGGTGATCCATCACGGCCGGCAGTATCAGGTGATGACCAATTCGCCGACCTTCGATCAGCAGCTCGCGCTCA ACGCCTACTGGAAGCAGATCGGCGGCACCGTGATGCTGCCGGGCACCAACCGCGCCGCGGACCGCTTCGCCCGCGCCTCG TTCTATGTCGATGCGATCCCGAAAGCGGAGAATCCGGTCGAAGCCATCGCCAGCGTGTTCGGCGTGATCCGCAACGCCTC GGTGCCCTACGGCATCACCACGCCCGACCAGCCGAACATCTCCTCGACGCGCTGGCGCACCGTGGTCGATCACAAGCGCA AACTGTACTTCTTCGAATCCGCGCTGACCCCGAACGTGTTCTGGGTCGACCTGACCAAAATCGACTTCTCGGCCGACAAG GGCACGGTGCAGAAGCTCGACCTCGGCCCCGGCCAGAGCAACACCTTCTCCGGCGAGGTCCACGACCGCTTCAGGCCGAG CGAGCCGTTCAAGTTTCTCGGGCTGTGA
Upstream 100 bases:
>100_bases CAAGCTCGGCGACGCGGTCCCGCGATCTTGAACGATCGGTATTTCACATGTCGGGTCGGCCCAGCTCATTCAGACAGATC CAGCCATCGGAGCCACAGCC
Downstream 100 bases:
>100_bases GGCGGAGCGGGACGGTCACTAGAGCGGTTCATCGCTTGACTGAAGCCACGCCGCATTCTCGCGTACGGCGTCGTCATCCT GAGGTGCGAGCGCAGCGAGC
Product: choloylglycine hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MIAFRRRFVTVSIAALLASGALLAPAAKACTRLVYLGAGDQVITARSMDWARDIGTNLWIFPRGIKRSGEAGPNSAQWTA RYGSVIASAYDIATSDGVNEAGLVANVLWLAESTYPKLDGGRPGLALSLWPQYVLDNFANVQEAVAALAKEPFTVVTAQL PDENRLATVHLSLSDKSGDSAIIEYIDGKQVIHHGRQYQVMTNSPTFDQQLALNAYWKQIGGTVMLPGTNRAADRFARAS FYVDAIPKAENPVEAIASVFGVIRNASVPYGITTPDQPNISSTRWRTVVDHKRKLYFFESALTPNVFWVDLTKIDFSADK GTVQKLDLGPGQSNTFSGEVHDRFRPSEPFKFLGL
Sequences:
>Translated_355_residues MIAFRRRFVTVSIAALLASGALLAPAAKACTRLVYLGAGDQVITARSMDWARDIGTNLWIFPRGIKRSGEAGPNSAQWTA RYGSVIASAYDIATSDGVNEAGLVANVLWLAESTYPKLDGGRPGLALSLWPQYVLDNFANVQEAVAALAKEPFTVVTAQL PDENRLATVHLSLSDKSGDSAIIEYIDGKQVIHHGRQYQVMTNSPTFDQQLALNAYWKQIGGTVMLPGTNRAADRFARAS FYVDAIPKAENPVEAIASVFGVIRNASVPYGITTPDQPNISSTRWRTVVDHKRKLYFFESALTPNVFWVDLTKIDFSADK GTVQKLDLGPGQSNTFSGEVHDRFRPSEPFKFLGL >Mature_355_residues MIAFRRRFVTVSIAALLASGALLAPAAKACTRLVYLGAGDQVITARSMDWARDIGTNLWIFPRGIKRSGEAGPNSAQWTA RYGSVIASAYDIATSDGVNEAGLVANVLWLAESTYPKLDGGRPGLALSLWPQYVLDNFANVQEAVAALAKEPFTVVTAQL PDENRLATVHLSLSDKSGDSAIIEYIDGKQVIHHGRQYQVMTNSPTFDQQLALNAYWKQIGGTVMLPGTNRAADRFARAS FYVDAIPKAENPVEAIASVFGVIRNASVPYGITTPDQPNISSTRWRTVVDHKRKLYFFESALTPNVFWVDLTKIDFSADK GTVQKLDLGPGQSNTFSGEVHDRFRPSEPFKFLGL
Specific function: Unknown
COG id: COG3049
COG function: function code M; Penicillin V acylase and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase C59 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003199 [H]
Pfam domain/function: PF02275 CBAH [H]
EC number: NA
Molecular weight: Translated: 38771; Mature: 38771
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAFRRRFVTVSIAALLASGALLAPAAKACTRLVYLGAGDQVITARSMDWARDIGTNLWI CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEECCCCCEEEECCCHHHHHCCCCEEE FPRGIKRSGEAGPNSAQWTARYGSVIASAYDIATSDGVNEAGLVANVLWLAESTYPKLDG EECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCC GRPGLALSLWPQYVLDNFANVQEAVAALAKEPFTVVTAQLPDENRLATVHLSLSDKSGDS CCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEECCCCCCC AIIEYIDGKQVIHHGRQYQVMTNSPTFDQQLALNAYWKQIGGTVMLPGTNRAADRFARAS EEEEECCCHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHH FYVDAIPKAENPVEAIASVFGVIRNASVPYGITTPDQPNISSTRWRTVVDHKRKLYFFES EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEC ALTPNVFWVDLTKIDFSADKGTVQKLDLGPGQSNTFSGEVHDRFRPSEPFKFLGL CCCCCEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCC >Mature Secondary Structure MIAFRRRFVTVSIAALLASGALLAPAAKACTRLVYLGAGDQVITARSMDWARDIGTNLWI CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEECCCCCEEEECCCHHHHHCCCCEEE FPRGIKRSGEAGPNSAQWTARYGSVIASAYDIATSDGVNEAGLVANVLWLAESTYPKLDG EECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCC GRPGLALSLWPQYVLDNFANVQEAVAALAKEPFTVVTAQLPDENRLATVHLSLSDKSGDS CCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEECCCCCCC AIIEYIDGKQVIHHGRQYQVMTNSPTFDQQLALNAYWKQIGGTVMLPGTNRAADRFARAS EEEEECCCHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHH FYVDAIPKAENPVEAIASVFGVIRNASVPYGITTPDQPNISSTRWRTVVDHKRKLYFFES EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEC ALTPNVFWVDLTKIDFSADKGTVQKLDLGPGQSNTFSGEVHDRFRPSEPFKFLGL CCCCCEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]