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The map label for this gene is 86750430

Identifier: 86750430

GI number: 86750430

Start: 3797782

End: 3798258

Strand: Direct

Name: 86750430

Synonym: RPB_3319

Alternate gene names: NA

Gene position: 3797782-3798258 (Clockwise)

Preceding gene: 86750429

Following gene: 86750433

Centisome position: 71.23

GC content: 64.99

Gene sequence:

>477_bases
ATGACACTGCGTGCCATGACCTTGATTTTGACTTGCCTTATCCCGCTCGCTGCGACGCATGCGGAGCCTATCGACGGAGC
CAGAATCCGAGTCATTGACGGGGATACGATCCGCATCGACCGGCAGAAGCCGGATCATAGGCTTGTCGGCTTCAACGCTC
CCGAGACACGCCGAGCCAAGAACGAAGCGGAGCGGGAGCTTGGCGGCCGCGCTACCGCCCGTTTGCGCGAGATACTGCGC
GGCGGCAAGCTGGACTACACGGTCGTGCCTTGCGCATGTAGACCCGGCACAGAAGGAACGATGGCCTGCAACTTCGGCCG
CCGCTGCGGGATGCTGAAGGCCGACGGCGTGGAAGTCGGGACCGTACTGATCCGGGAGGGGCTGGCCGTGCCGTTCATGT
GCGGCCCGACGAGCTGTCCGCGAACGCCCAATCAGTGGCGGCAGCCGCAGAGAGCCCCGCAGGCGGAGAAGCCGTAG

Upstream 100 bases:

>100_bases
CTGCCCATGATCCGACGAGGGCGATGCTGATGTACGGCTGCGACGCCGACCAAAGGCTGACGATCGAGGCGGTTGAATGC
GTTAGTGTTAGAGGGACTTG

Downstream 100 bases:

>100_bases
CCCTCCCCAACCGTCTTTCCGCTCACCGCACGCCACGGCGACGGCCAGCACGCCGTCCGTCAGTGGCAGTGCGGCTATGC
TAGAGCCGGGCCTACCCCGG

Product: SNase-like nuclease

Products: NA

Alternate protein names: SNase-Like Nuclease; Nuclease

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MTLRAMTLILTCLIPLAATHAEPIDGARIRVIDGDTIRIDRQKPDHRLVGFNAPETRRAKNEAERELGGRATARLREILR
GGKLDYTVVPCACRPGTEGTMACNFGRRCGMLKADGVEVGTVLIREGLAVPFMCGPTSCPRTPNQWRQPQRAPQAEKP

Sequences:

>Translated_158_residues
MTLRAMTLILTCLIPLAATHAEPIDGARIRVIDGDTIRIDRQKPDHRLVGFNAPETRRAKNEAERELGGRATARLREILR
GGKLDYTVVPCACRPGTEGTMACNFGRRCGMLKADGVEVGTVLIREGLAVPFMCGPTSCPRTPNQWRQPQRAPQAEKP
>Mature_157_residues
TLRAMTLILTCLIPLAATHAEPIDGARIRVIDGDTIRIDRQKPDHRLVGFNAPETRRAKNEAERELGGRATARLREILRG
GKLDYTVVPCACRPGTEGTMACNFGRRCGMLKADGVEVGTVLIREGLAVPFMCGPTSCPRTPNQWRQPQRAPQAEKP

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17359; Mature: 17228

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRAMTLILTCLIPLAATHAEPIDGARIRVIDGDTIRIDRQKPDHRLVGFNAPETRRAK
CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCCCCCCEEEECCCCHHHHHH
NEAERELGGRATARLREILRGGKLDYTVVPCACRPGTEGTMACNFGRRCGMLKADGVEVG
HHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCHHH
TVLIREGLAVPFMCGPTSCPRTPNQWRQPQRAPQAEKP
HHHHHCCCCCCEEECCCCCCCCCHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TLRAMTLILTCLIPLAATHAEPIDGARIRVIDGDTIRIDRQKPDHRLVGFNAPETRRAK
CHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCCCCCCEEEECCCCHHHHHH
NEAERELGGRATARLREILRGGKLDYTVVPCACRPGTEGTMACNFGRRCGMLKADGVEVG
HHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCHHH
TVLIREGLAVPFMCGPTSCPRTPNQWRQPQRAPQAEKP
HHHHHCCCCCCEEECCCCCCCCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA