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The map label for this gene is 86750329

Identifier: 86750329

GI number: 86750329

Start: 3680635

End: 3681459

Strand: Direct

Name: 86750329

Synonym: RPB_3218

Alternate gene names: NA

Gene position: 3680635-3681459 (Clockwise)

Preceding gene: 86750328

Following gene: 86750330

Centisome position: 69.03

GC content: 68.85

Gene sequence:

>825_bases
ATGCGCCTGCGAATTTCCCACAGCACGACCTATCGCTACGAGCCCGCCGCCACCGGGGTGATCCAGGTGCTGCGGCTGAC
GCCCGGCAGCCATGACGGTCAGTATGTCGCCGACTGGCAGATCGACGTCTCGGCCGACGTCAAGCTCGACATGCATTACG
ACGCGTTCGGCAACGCCACCCACGTGCTGACGATCGGCGCCACCGAGGATCTCACCATCACCGCCGAGGGACTGATCGAG
ACCATCGACACCGGCGGCGTGATGCGCGGCACCGACGAGCGGTTTCCGCCGCAGCTGTTCCTGCGCACGAGCGACCTCAC
CGAACTGAGCCCGGCGATGGCCGCGTTCACGCGCGAGATCGGCGGCGCCGAGGGCGACGCCATCAGCTTCCTGCACGCGC
TGATGACGCGGATGAACGACCACATGACGTTCGACGACGACCCCACCCATTCCGGCACCACCGCGGCCGAAGCCTTCACG
CTGCGCCGCGGCGTCTGTCAGGATTACGCGCATATCTTCATCGCCTGCGCGCGCGCCGGCGGCGTCCCTGCCCGGTTCGT
CGCGGGCCACTTCCTGCGCGCCGACGGCGAGGTGCATCAGCAGGCCGGCCATGCCTGGGCCGAGGCCTATGTCCCGGCGC
TCGGCTGGGTCGGCTTCGATCCGGCCAACAGCATCTGCTCGACCGACGCCCATGTCCGGGTCGCGATCGGGCTGGATTAT
CTCGGCGCCGCCCCGGTGCGCGGCACCCGCTATGGCGGCGGGCTCGAAACGCTGTCGGTGGCCGTCAAGGTCGATCAGGC
CGGCCGGCAGTTCCAGTCGCAATAG

Upstream 100 bases:

>100_bases
AAAAAGACGCGAACAACGGCGATTGATGAAACGCCTTCGCGTCCGAGCCTGATATAGTCCGCCGCGCTCCTGCCGCCGCG
ACGACCCGGAATGCCGATCC

Downstream 100 bases:

>100_bases
CTTCATCGCCGCTTGCGCAAACTGCGGCGCGGCGGCTTCCCTTTCAGACGCATTGGTTCGAGGACGAGATGACTTATTGC
TGCGGAGTGCTGGTCGAGGA

Product: transglutaminase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MRLRISHSTTYRYEPAATGVIQVLRLTPGSHDGQYVADWQIDVSADVKLDMHYDAFGNATHVLTIGATEDLTITAEGLIE
TIDTGGVMRGTDERFPPQLFLRTSDLTELSPAMAAFTREIGGAEGDAISFLHALMTRMNDHMTFDDDPTHSGTTAAEAFT
LRRGVCQDYAHIFIACARAGGVPARFVAGHFLRADGEVHQQAGHAWAEAYVPALGWVGFDPANSICSTDAHVRVAIGLDY
LGAAPVRGTRYGGGLETLSVAVKVDQAGRQFQSQ

Sequences:

>Translated_274_residues
MRLRISHSTTYRYEPAATGVIQVLRLTPGSHDGQYVADWQIDVSADVKLDMHYDAFGNATHVLTIGATEDLTITAEGLIE
TIDTGGVMRGTDERFPPQLFLRTSDLTELSPAMAAFTREIGGAEGDAISFLHALMTRMNDHMTFDDDPTHSGTTAAEAFT
LRRGVCQDYAHIFIACARAGGVPARFVAGHFLRADGEVHQQAGHAWAEAYVPALGWVGFDPANSICSTDAHVRVAIGLDY
LGAAPVRGTRYGGGLETLSVAVKVDQAGRQFQSQ
>Mature_274_residues
MRLRISHSTTYRYEPAATGVIQVLRLTPGSHDGQYVADWQIDVSADVKLDMHYDAFGNATHVLTIGATEDLTITAEGLIE
TIDTGGVMRGTDERFPPQLFLRTSDLTELSPAMAAFTREIGGAEGDAISFLHALMTRMNDHMTFDDDPTHSGTTAAEAFT
LRRGVCQDYAHIFIACARAGGVPARFVAGHFLRADGEVHQQAGHAWAEAYVPALGWVGFDPANSICSTDAHVRVAIGLDY
LGAAPVRGTRYGGGLETLSVAVKVDQAGRQFQSQ

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2569c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013589
- InterPro:   IPR002931 [H]

Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]

EC number: NA

Molecular weight: Translated: 29524; Mature: 29524

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRISHSTTYRYEPAATGVIQVLRLTPGSHDGQYVADWQIDVSADVKLDMHYDAFGNAT
CEEEEECCCEEEECCCHHCEEEEEEECCCCCCCCEEEEEEEEEECCEEEEEEECCCCCCE
HVLTIGATEDLTITAEGLIETIDTGGVMRGTDERFPPQLFLRTSDLTELSPAMAAFTREI
EEEEECCCCCEEEEHHHHHHHHCCCCEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
GGAEGDAISFLHALMTRMNDHMTFDDDPTHSGTTAAEAFTLRRGVCQDYAHIFIACARAG
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GVPARFVAGHFLRADGEVHQQAGHAWAEAYVPALGWVGFDPANSICSTDAHVRVAIGLDY
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEEEECCC
LGAAPVRGTRYGGGLETLSVAVKVDQAGRQFQSQ
CCCCCCCCCCCCCCCEEEEEEEEECHHHHHHCCC
>Mature Secondary Structure
MRLRISHSTTYRYEPAATGVIQVLRLTPGSHDGQYVADWQIDVSADVKLDMHYDAFGNAT
CEEEEECCCEEEECCCHHCEEEEEEECCCCCCCCEEEEEEEEEECCEEEEEEECCCCCCE
HVLTIGATEDLTITAEGLIETIDTGGVMRGTDERFPPQLFLRTSDLTELSPAMAAFTREI
EEEEECCCCCEEEEHHHHHHHHCCCCEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
GGAEGDAISFLHALMTRMNDHMTFDDDPTHSGTTAAEAFTLRRGVCQDYAHIFIACARAG
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GVPARFVAGHFLRADGEVHQQAGHAWAEAYVPALGWVGFDPANSICSTDAHVRVAIGLDY
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEEEECCC
LGAAPVRGTRYGGGLETLSVAVKVDQAGRQFQSQ
CCCCCCCCCCCCCCCEEEEEEEEECHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]