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The map label for this gene is 86750222

Identifier: 86750222

GI number: 86750222

Start: 3542544

End: 3543071

Strand: Direct

Name: 86750222

Synonym: RPB_3109

Alternate gene names: NA

Gene position: 3542544-3543071 (Clockwise)

Preceding gene: 86750221

Following gene: 86750234

Centisome position: 66.44

GC content: 65.34

Gene sequence:

>528_bases
ATGGCCACGGCGAGACACGCACGCCCGAAGGAGCTCGAAGGCGTCTCGATCGACGAAATCATCGAACGTTACGTCGCGCG
CTACGCAGATCGCAGGGCCGACTGGGCAGCCTTCGAAGACGCCAAGATCGAAGGCTACAAGCGCGCCCAGCACCGCTTCA
TCGGCGCCGGCGGCTCCGGCAAGTACAACGACTCCACCGTGATCCCGGCCGGCAACTTCACGCTGTCGATCATGTTCGTG
CCGCCCGGCCAGGGCAACGCACCCCACACCCACGAGGCCGAAGAGGTGTTCTTCGTGCTGCAGGGCCATCTCGACGTGTT
CGTCGAGGACGAGAGCGGCCGCCGCATCACTCGTCGCCTCGGACCGTGGGAGTGCATCTCTTGCCCCGCGGGCGTGATCC
ACGGCTATCAGAACGACAGCCTGGAGCCGGTGTACTTCCAGGTGATGATCGGCCGCGGCAAGCCGGAAACGATGGGCTAC
GCCGACGACGAGCTGTACAAGCGCCGCGACGCGCATCTCAAGGCCTGA

Upstream 100 bases:

>100_bases
GCCAGCACCGCTGCTGGCAAAATTAGTTGACTAGTTAGTCAACACGAAATACCCATGATGTACTGACACTCCTTGTGGAA
CGGTTCTGGAGGAATTTGAC

Downstream 100 bases:

>100_bases
GCTCCGCGCGGCGCCGGCCGCGACGACACCGGGACCAGCCATCGAGGCCGGTGCGATCACGCGATCGCGCCGGCCTTTTC
GTCTTTGGCGCCACTTCAGG

Product: cupin region

Products: NA

Alternate protein names: Cupin Region; Cupin Domain-Containing Protein; Cupin 2 Barrel; Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Conserved Barrel; Cupin 2 Protein

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MATARHARPKELEGVSIDEIIERYVARYADRRADWAAFEDAKIEGYKRAQHRFIGAGGSGKYNDSTVIPAGNFTLSIMFV
PPGQGNAPHTHEAEEVFFVLQGHLDVFVEDESGRRITRRLGPWECISCPAGVIHGYQNDSLEPVYFQVMIGRGKPETMGY
ADDELYKRRDAHLKA

Sequences:

>Translated_175_residues
MATARHARPKELEGVSIDEIIERYVARYADRRADWAAFEDAKIEGYKRAQHRFIGAGGSGKYNDSTVIPAGNFTLSIMFV
PPGQGNAPHTHEAEEVFFVLQGHLDVFVEDESGRRITRRLGPWECISCPAGVIHGYQNDSLEPVYFQVMIGRGKPETMGY
ADDELYKRRDAHLKA
>Mature_174_residues
ATARHARPKELEGVSIDEIIERYVARYADRRADWAAFEDAKIEGYKRAQHRFIGAGGSGKYNDSTVIPAGNFTLSIMFVP
PGQGNAPHTHEAEEVFFVLQGHLDVFVEDESGRRITRRLGPWECISCPAGVIHGYQNDSLEPVYFQVMIGRGKPETMGYA
DDELYKRRDAHLKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19684; Mature: 19553

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATARHARPKELEGVSIDEIIERYVARYADRRADWAAFEDAKIEGYKRAQHRFIGAGGSG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHEEEECCCCC
KYNDSTVIPAGNFTLSIMFVPPGQGNAPHTHEAEEVFFVLQGHLDVFVEDESGRRITRRL
CCCCCEEEECCCEEEEEEEECCCCCCCCCCCCHHHEEEEEECCEEEEEECCCCCCHHHHC
GPWECISCPAGVIHGYQNDSLEPVYFQVMIGRGKPETMGYADDELYKRRDAHLKA
CCCCEECCCHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
ATARHARPKELEGVSIDEIIERYVARYADRRADWAAFEDAKIEGYKRAQHRFIGAGGSG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHEEEECCCCC
KYNDSTVIPAGNFTLSIMFVPPGQGNAPHTHEAEEVFFVLQGHLDVFVEDESGRRITRRL
CCCCCEEEECCCEEEEEEEECCCCCCCCCCCCHHHEEEEEECCEEEEEECCCCCCHHHHC
GPWECISCPAGVIHGYQNDSLEPVYFQVMIGRGKPETMGYADDELYKRRDAHLKA
CCCCEECCCHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA