Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is 86750150

Identifier: 86750150

GI number: 86750150

Start: 3455908

End: 3456513

Strand: Direct

Name: 86750150

Synonym: RPB_3033

Alternate gene names: NA

Gene position: 3455908-3456513 (Clockwise)

Preceding gene: 86750148

Following gene: 86750152

Centisome position: 64.82

GC content: 70.96

Gene sequence:

>606_bases
ATGTTGAATCTCAAGACATTGACCGCCGTGGCCGCGCTCGCGATGGCGATGCCTCTGGCGTCCGCTGAACTCAGCTTCGC
CCAAGGCAGCATCGGTGGCGGCGGTGCCGCCGGCGGGGGTGGCGGCGGCGGCGGGGGTGGCGGCGGACCCGCGATCGGCG
GCGGCGGCGCCGGCAGCATTGGTGGCGGTGGCAGCATCGGCCGCGGTGGCGGCGGTGGCGGTGGACCCGCGATCGGCGGC
GGTGGATCGCGCGGTCCGGGATTCGCCGGCGGCGGCGGACCTCGCCCCGGCTTCCAGGGTGGTGGGCCTCGTCCCGGCTA
CCACGGCGGCGGCCCGCGTGGCCCGCGGTTTTCGGGCGGCGGCTATCGCGGCGGATATTACGGCGGTTATTGGCCGGGAG
CCTATGCGGGCGCCTTCGTCGGCGGCCTCGGCTCGTCCTATTACTACAATGATCCCTATGGCTACGGTTACTACGACGAA
CCCTCTGTGGTCGTCGTACCGGGCGAGGATCGCGACGACGCCTATTGCTCGCGGCGCTTCAAGTCCTACGATCCGGCCTC
GGGCACCTATCTGGGCTATGACGGCAAGCGTCATCCCTGCCCGTAA

Upstream 100 bases:

>100_bases
CCGCAATCTGGGAGGCTCGTCTGAAAAGCCGGAACGACGCCAGTTCGAGCGTGTTGTGTCGGGGAAGGTTTCATTCGATT
TCCCACTGATGGAGTCCAAG

Downstream 100 bases:

>100_bases
TCACCGGCTGCAATGAAGCTGCTCGAACGGCGCCCATCCGGGCGCCGTTTCTGCTTGGCTCAGGATCGCAAGGCCAGCGC
AACGCCGGCCAGAGTCACCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MLNLKTLTAVAALAMAMPLASAELSFAQGSIGGGGAAGGGGGGGGGGGGPAIGGGGAGSIGGGGSIGRGGGGGGGPAIGG
GGSRGPGFAGGGGPRPGFQGGGPRPGYHGGGPRGPRFSGGGYRGGYYGGYWPGAYAGAFVGGLGSSYYYNDPYGYGYYDE
PSVVVVPGEDRDDAYCSRRFKSYDPASGTYLGYDGKRHPCP

Sequences:

>Translated_201_residues
MLNLKTLTAVAALAMAMPLASAELSFAQGSIGGGGAAGGGGGGGGGGGGPAIGGGGAGSIGGGGSIGRGGGGGGGPAIGG
GGSRGPGFAGGGGPRPGFQGGGPRPGYHGGGPRGPRFSGGGYRGGYYGGYWPGAYAGAFVGGLGSSYYYNDPYGYGYYDE
PSVVVVPGEDRDDAYCSRRFKSYDPASGTYLGYDGKRHPCP
>Mature_201_residues
MLNLKTLTAVAALAMAMPLASAELSFAQGSIGGGGAAGGGGGGGGGGGGPAIGGGGAGSIGGGGSIGRGGGGGGGPAIGG
GGSRGPGFAGGGGPRPGFQGGGPRPGYHGGGPRGPRFSGGGYRGGYYGGYWPGAYAGAFVGGLGSSYYYNDPYGYGYYDE
PSVVVVPGEDRDDAYCSRRFKSYDPASGTYLGYDGKRHPCP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19069; Mature: 19069

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLKTLTAVAALAMAMPLASAELSFAQGSIGGGGAAGGGGGGGGGGGGPAIGGGGAGSI
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGGGSIGRGGGGGGGPAIGGGGSRGPGFAGGGGPRPGFQGGGPRPGYHGGGPRGPRFSGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GYRGGYYGGYWPGAYAGAFVGGLGSSYYYNDPYGYGYYDEPSVVVVPGEDRDDAYCSRRF
CCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHH
KSYDPASGTYLGYDGKRHPCP
CCCCCCCCCEECCCCCCCCCC
>Mature Secondary Structure
MLNLKTLTAVAALAMAMPLASAELSFAQGSIGGGGAAGGGGGGGGGGGGPAIGGGGAGSI
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGGGSIGRGGGGGGGPAIGGGGSRGPGFAGGGGPRPGFQGGGPRPGYHGGGPRGPRFSGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GYRGGYYGGYWPGAYAGAFVGGLGSSYYYNDPYGYGYYDEPSVVVVPGEDRDDAYCSRRF
CCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHH
KSYDPASGTYLGYDGKRHPCP
CCCCCCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA