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The map label for this gene is yfgC [H]

Identifier: 86750130

GI number: 86750130

Start: 3436452

End: 3437879

Strand: Direct

Name: yfgC [H]

Synonym: RPB_3013

Alternate gene names: 86750130

Gene position: 3436452-3437879 (Clockwise)

Preceding gene: 86750126

Following gene: 86750131

Centisome position: 64.45

GC content: 67.37

Gene sequence:

>1428_bases
ATGCCCAATGTGATGATTGAAACTCTGCCCGGAGGATTGCGCCGGAAGGCCTGCGCGCAGGCGTCGCGGCTGGTGGCGAT
CCTGAGCGCCGCCGCGCTGGCGCTCGCCCCGGTTCCCGGCCTCGCGCAGGCGCCGCAGCCGAAGGGGCCGCCGCTGCTGC
GCGACACCGAGATCGAGAATCTGCTGCGCGACTATACGCGACCGATCCTGCGCGTCGCCGGCCTCGAAAAGCAGAACATC
CAGATCGCCATCATCAACGATCCGAATTTCAACGCCTTCGTCGCCGACGGCCGCCGCATCTTCGTCAATTACGGTGCGCT
GATGCAGTCGCAAACCCCGAACCAGTTGATCGGCGTGCTGGCGCACGAGACCGGCCATCTCGCCGGCGGCCATCTGTCCA
AGCTCCGCACCCAGCTCGCGCAAGCACAGACGCAGATGATCGTGGCGATGCTGCTCGGCGTCGGCGCGATGGTGGCGGGC
TCCAAGGCCGGCCCGAACAGCGGCGCCGGCAATATCGGTGCGGCCGCGATCTCGGCGCCGCAGGAATTGATCCGGCGCAA
TCTGCTGTCCTATCAGCGGCAGCAGGAAGAGAACGCCGACAAGGCCGCAGTGAAATTTCTCGACGCCACCGGCCAGTCGG
CGAAGGGCATGTACGAAACGTTCCGTCGTTTCACCGACGAGAGCCTGTTCGCCGCGCGCGGCGCCGATCCTTATGCGCAG
TCGCATCCGATGCCGGCCGAACGCGTCCGCGCGCTGGAAGAGCTGGCGCGCTCCAGCCCGAATTGGGACAAGAAGGACGA
CGCCGCACTGCAGCTCCGCCACGACATGATGCGTGCCAAGACGTCCGGCTTCATGGAGCGTCCCGACACCGTTTACCGGC
GCTATCCGTCGTCGAACACCAGCCTGCCCGCGCGCTACGCCCGCGCCATCTCGACCTATCTGCACGGCGATCCGCGCTCG
GCGCTGGCCCAGATCGACGGCCTGATTCAGGCCGAGCCGAACAATCCCTATTTCTACGAGTTGCGCGGCCAGGCGCTGCT
CGAGGGCGGTCGGCCGCAGGAAGCGATCGCGCCACTGCGCAAGGCGTTGTCGCTCAGCCGCAGCGCCCCGCTGATCGAGA
TGCTGCTCGGCCAGGCGCTGGTGGCCTCGGGCAGCGCCGCCTCGACCGAAGAGGCGATCCGGATTCTGAAGTCGGCGCTG
TCGCGCGAGGCTGAAGCGCCGCTCGGCTACAGCCAACTCGCGATGGCCTATGGCCGCAAGGGCGACTACGCCGAAGCCGA
TCTCGCGTCGGCCCAGGCGGCCTTTCTGCGCGGCGACAACAAGACCGCGCGCGCACTCGCGGCGCGCGCCAAGACCCGCT
TCCCGGTCGGCTCGCCGGGCTGGGTCAAGGCGGACGATATCGTCGAAGCGAAATCAACATCCAAATAG

Upstream 100 bases:

>100_bases
GCTACTCCCGCGCGGTTCGGTTCGGCGAAACCCGGCGGCGTCGCGCTGCTGCCGTATTGCTGGGCTGATCAGGGGATATC
CGTTATTCGAACCTCGGCCA

Downstream 100 bases:

>100_bases
CGCACTGCGTGTGATTGCGGATCACACGCAGCATCGGCCGCGCACGGGCGCAGTCTGGGCCATGTCAAATACATCGCGGC
GACAAAGTGTCTCGATGTTT

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MPNVMIETLPGGLRRKACAQASRLVAILSAAALALAPVPGLAQAPQPKGPPLLRDTEIENLLRDYTRPILRVAGLEKQNI
QIAIINDPNFNAFVADGRRIFVNYGALMQSQTPNQLIGVLAHETGHLAGGHLSKLRTQLAQAQTQMIVAMLLGVGAMVAG
SKAGPNSGAGNIGAAAISAPQELIRRNLLSYQRQQEENADKAAVKFLDATGQSAKGMYETFRRFTDESLFAARGADPYAQ
SHPMPAERVRALEELARSSPNWDKKDDAALQLRHDMMRAKTSGFMERPDTVYRRYPSSNTSLPARYARAISTYLHGDPRS
ALAQIDGLIQAEPNNPYFYELRGQALLEGGRPQEAIAPLRKALSLSRSAPLIEMLLGQALVASGSAASTEEAIRILKSAL
SREAEAPLGYSQLAMAYGRKGDYAEADLASAQAAFLRGDNKTARALAARAKTRFPVGSPGWVKADDIVEAKSTSK

Sequences:

>Translated_475_residues
MPNVMIETLPGGLRRKACAQASRLVAILSAAALALAPVPGLAQAPQPKGPPLLRDTEIENLLRDYTRPILRVAGLEKQNI
QIAIINDPNFNAFVADGRRIFVNYGALMQSQTPNQLIGVLAHETGHLAGGHLSKLRTQLAQAQTQMIVAMLLGVGAMVAG
SKAGPNSGAGNIGAAAISAPQELIRRNLLSYQRQQEENADKAAVKFLDATGQSAKGMYETFRRFTDESLFAARGADPYAQ
SHPMPAERVRALEELARSSPNWDKKDDAALQLRHDMMRAKTSGFMERPDTVYRRYPSSNTSLPARYARAISTYLHGDPRS
ALAQIDGLIQAEPNNPYFYELRGQALLEGGRPQEAIAPLRKALSLSRSAPLIEMLLGQALVASGSAASTEEAIRILKSAL
SREAEAPLGYSQLAMAYGRKGDYAEADLASAQAAFLRGDNKTARALAARAKTRFPVGSPGWVKADDIVEAKSTSK
>Mature_474_residues
PNVMIETLPGGLRRKACAQASRLVAILSAAALALAPVPGLAQAPQPKGPPLLRDTEIENLLRDYTRPILRVAGLEKQNIQ
IAIINDPNFNAFVADGRRIFVNYGALMQSQTPNQLIGVLAHETGHLAGGHLSKLRTQLAQAQTQMIVAMLLGVGAMVAGS
KAGPNSGAGNIGAAAISAPQELIRRNLLSYQRQQEENADKAAVKFLDATGQSAKGMYETFRRFTDESLFAARGADPYAQS
HPMPAERVRALEELARSSPNWDKKDDAALQLRHDMMRAKTSGFMERPDTVYRRYPSSNTSLPARYARAISTYLHGDPRSA
LAQIDGLIQAEPNNPYFYELRGQALLEGGRPQEAIAPLRKALSLSRSAPLIEMLLGQALVASGSAASTEEAIRILKSALS
REAEAPLGYSQLAMAYGRKGDYAEADLASAQAAFLRGDNKTARALAARAKTRFPVGSPGWVKADDIVEAKSTSK

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=377, Percent_Identity=23.0769230769231, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 51120; Mature: 50989

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNVMIETLPGGLRRKACAQASRLVAILSAAALALAPVPGLAQAPQPKGPPLLRDTEIEN
CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
LLRDYTRPILRVAGLEKQNIQIAIINDPNFNAFVADGRRIFVNYGALMQSQTPNQLIGVL
HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCEEEEEHHHHHCCCCHHHHHHHH
AHETGHLAGGHLSKLRTQLAQAQTQMIVAMLLGVGAMVAGSKAGPNSGAGNIGAAAISAP
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
QELIRRNLLSYQRQQEENADKAAVKFLDATGQSAKGMYETFRRFTDESLFAARGADPYAQ
HHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCHH
SHPMPAERVRALEELARSSPNWDKKDDAALQLRHDMMRAKTSGFMERPDTVYRRYPSSNT
CCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC
SLPARYARAISTYLHGDPRSALAQIDGLIQAEPNNPYFYELRGQALLEGGRPQEAIAPLR
CCHHHHHHHHHHHHCCCHHHHHHHHCCCEEECCCCCEEEEECCHHHHCCCCCHHHHHHHH
KALSLSRSAPLIEMLLGQALVASGSAASTEEAIRILKSALSREAEAPLGYSQLAMAYGRK
HHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
GDYAEADLASAQAAFLRGDNKTARALAARAKTRFPVGSPGWVKADDIVEAKSTSK
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure 
PNVMIETLPGGLRRKACAQASRLVAILSAAALALAPVPGLAQAPQPKGPPLLRDTEIEN
CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
LLRDYTRPILRVAGLEKQNIQIAIINDPNFNAFVADGRRIFVNYGALMQSQTPNQLIGVL
HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCEEEEEHHHHHCCCCHHHHHHHH
AHETGHLAGGHLSKLRTQLAQAQTQMIVAMLLGVGAMVAGSKAGPNSGAGNIGAAAISAP
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
QELIRRNLLSYQRQQEENADKAAVKFLDATGQSAKGMYETFRRFTDESLFAARGADPYAQ
HHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCHH
SHPMPAERVRALEELARSSPNWDKKDDAALQLRHDMMRAKTSGFMERPDTVYRRYPSSNT
CCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC
SLPARYARAISTYLHGDPRSALAQIDGLIQAEPNNPYFYELRGQALLEGGRPQEAIAPLR
CCHHHHHHHHHHHHCCCHHHHHHHHCCCEEECCCCCEEEEECCHHHHCCCCCHHHHHHHH
KALSLSRSAPLIEMLLGQALVASGSAASTEEAIRILKSALSREAEAPLGYSQLAMAYGRK
HHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
GDYAEADLASAQAAFLRGDNKTARALAARAKTRFPVGSPGWVKADDIVEAKSTSK
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]