Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86750047
Identifier: 86750047
GI number: 86750047
Start: 3342379
End: 3342729
Strand: Direct
Name: 86750047
Synonym: RPB_2930
Alternate gene names: NA
Gene position: 3342379-3342729 (Clockwise)
Preceding gene: 86750045
Following gene: 86750053
Centisome position: 62.69
GC content: 66.38
Gene sequence:
>351_bases ATGCGAAACGGGCTGTATTCGATCCACATCAGGATGCTCGACGGGGTCCGTGGCCGGTCCAACGGGATCATCATCCTGCG CGACGGCAGGCTGCTCGGCGGCGATCCGTATTTCTGGACGGTGGGCGACTACACGATCGGCGACGGCCATTGGAAGGGCG AATTGCTGACGCGCCAGCACACGCCCTATGCGGAGACCCCGGCCCGGCCGGTGTTCGCCGGGCGCGACGTCACGACAGGC TTCACCGGCACCTTCGCCGACGATCGCTCCGAAGTGTTCGGCACGTCGCTGGTCGGAAGCCGCAGCGTCAGCTTCCGCGC CACGCTGCGCCGGCTCTCCGATATCAACTGA
Upstream 100 bases:
>100_bases GGAACTCATCCGCCCGCCCACAATCGGGGGCCGTTCCGGCCACTCGCGCATTGCGCGAACCGCTCCCGGCGGTAAGCTCA GGCGGGACATTGGCGCACCG
Downstream 100 bases:
>100_bases CATCGTCGGCCCGGCTGGGCCCGATCGTACCGGAACGGGCCCACCGCAGGCCGCGCTTACTTCTTCATGCCGTCCTTCGA CATGTTGTCCTTGTGCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MRNGLYSIHIRMLDGVRGRSNGIIILRDGRLLGGDPYFWTVGDYTIGDGHWKGELLTRQHTPYAETPARPVFAGRDVTTG FTGTFADDRSEVFGTSLVGSRSVSFRATLRRLSDIN
Sequences:
>Translated_116_residues MRNGLYSIHIRMLDGVRGRSNGIIILRDGRLLGGDPYFWTVGDYTIGDGHWKGELLTRQHTPYAETPARPVFAGRDVTTG FTGTFADDRSEVFGTSLVGSRSVSFRATLRRLSDIN >Mature_116_residues MRNGLYSIHIRMLDGVRGRSNGIIILRDGRLLGGDPYFWTVGDYTIGDGHWKGELLTRQHTPYAETPARPVFAGRDVTTG FTGTFADDRSEVFGTSLVGSRSVSFRATLRRLSDIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12892; Mature: 12892
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNGLYSIHIRMLDGVRGRSNGIIILRDGRLLGGDPYFWTVGDYTIGDGHWKGELLTRQH CCCCEEEEEEEEECCCCCCCCCEEEEECCEEECCCCCEEECCCEEECCCCCCCEEEEECC TPYAETPARPVFAGRDVTTGFTGTFADDRSEVFGTSLVGSRSVSFRATLRRLSDIN CCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHCEEECCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MRNGLYSIHIRMLDGVRGRSNGIIILRDGRLLGGDPYFWTVGDYTIGDGHWKGELLTRQH CCCCEEEEEEEEECCCCCCCCCEEEEECCEEECCCCCEEECCCEEECCCCCCCEEEEECC TPYAETPARPVFAGRDVTTGFTGTFADDRSEVFGTSLVGSRSVSFRATLRRLSDIN CCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHCEEECCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA