Click here to switch to the map view.

The map label for this gene is 86750037

Identifier: 86750037

GI number: 86750037

Start: 3334647

End: 3335273

Strand: Direct

Name: 86750037

Synonym: RPB_2920

Alternate gene names: NA

Gene position: 3334647-3335273 (Clockwise)

Preceding gene: 86750030

Following gene: 86750040

Centisome position: 62.54

GC content: 53.43

Gene sequence:

>627_bases
ATGCGCTGGGTAGGACAGGTGTCCGCAGTCATCGCGGACACGAAAAATTTGCTGCTGCAGGCTGAAATATCAATTGCGAT
TGACGGTTTACAGCATCCAGGCCGCGCGGATTCATTTCAGAAAATTATGATTACGCTATACAAGGCCCTGGGTGAAGCGG
AACTGATTGCGCCTGCTGATGCGAAGGGCTCGTTTGTCCCCGTTGGTAATACATTCGATGCATTCTCTGCGGTTTCAAAG
ATACTGGGCTCGGCACGTCACGACGTATTGCTCGTCGACCCATATCTGGACGATTCGGTCTTGGTCGACTTTGGAGGCTG
CGCTCCGGAAGGCGTTCCGGTCCGCTTGTTAACAGACGAAGCCACTGTCAAACCCAGCCTTGCGCCGGCGGTAGCCCGTT
GGAAGGTGCAGTACCCTTCTCGACCAGTCGAAGTTCGCTTATCGCCTGCGCGTACGCTTCACGACCGAGCGATCTTTATT
GACAATGCAATAGCTTGGACTGTCACTCAGTCACTAAAGGATCTTGCGAAAAGATCACCCGCCGAACTTGTACGGGTCGA
TGATACTGCTTCATTGAAGATCTCCGCGTACGACGCCCTTTGGCACGCAGCTCAACTTTGCCCTTGA

Upstream 100 bases:

>100_bases
TGGATTGTACATGCAGCCCGATCAGCGTTATCGCCAAATTGGACGCCTGATAGAAATTGCTCCGCCGGCGCCTCGCAATG
ATAATTTGTCGCTGGAACTA

Downstream 100 bases:

>100_bases
GAAAGACAAGACACACCATGACTGAAGAAATCACAGATGGAAGCGTAGTTCGTCTTAAATCAGGGGGCCCCTCAATGACG
GTGAAATGGGTTGGCGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MRWVGQVSAVIADTKNLLLQAEISIAIDGLQHPGRADSFQKIMITLYKALGEAELIAPADAKGSFVPVGNTFDAFSAVSK
ILGSARHDVLLVDPYLDDSVLVDFGGCAPEGVPVRLLTDEATVKPSLAPAVARWKVQYPSRPVEVRLSPARTLHDRAIFI
DNAIAWTVTQSLKDLAKRSPAELVRVDDTASLKISAYDALWHAAQLCP

Sequences:

>Translated_208_residues
MRWVGQVSAVIADTKNLLLQAEISIAIDGLQHPGRADSFQKIMITLYKALGEAELIAPADAKGSFVPVGNTFDAFSAVSK
ILGSARHDVLLVDPYLDDSVLVDFGGCAPEGVPVRLLTDEATVKPSLAPAVARWKVQYPSRPVEVRLSPARTLHDRAIFI
DNAIAWTVTQSLKDLAKRSPAELVRVDDTASLKISAYDALWHAAQLCP
>Mature_208_residues
MRWVGQVSAVIADTKNLLLQAEISIAIDGLQHPGRADSFQKIMITLYKALGEAELIAPADAKGSFVPVGNTFDAFSAVSK
ILGSARHDVLLVDPYLDDSVLVDFGGCAPEGVPVRLLTDEATVKPSLAPAVARWKVQYPSRPVEVRLSPARTLHDRAIFI
DNAIAWTVTQSLKDLAKRSPAELVRVDDTASLKISAYDALWHAAQLCP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22469; Mature: 22469

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWVGQVSAVIADTKNLLLQAEISIAIDGLQHPGRADSFQKIMITLYKALGEAELIAPAD
CCCHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEECCC
AKGSFVPVGNTFDAFSAVSKILGSARHDVLLVDPYLDDSVLVDFGGCAPEGVPVRLLTDE
CCCCEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCCCCEEEEEECC
ATVKPSLAPAVARWKVQYPSRPVEVRLSPARTLHDRAIFIDNAIAWTVTQSLKDLAKRSP
CCCCCCCCCHHHEEEEECCCCCEEEEECCCCHHCCEEEEECCCHHHHHHHHHHHHHHCCC
AELVRVDDTASLKISAYDALWHAAQLCP
CCEEEECCCCEEEEEHHHHHHHHHHCCC
>Mature Secondary Structure
MRWVGQVSAVIADTKNLLLQAEISIAIDGLQHPGRADSFQKIMITLYKALGEAELIAPAD
CCCHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEECCC
AKGSFVPVGNTFDAFSAVSKILGSARHDVLLVDPYLDDSVLVDFGGCAPEGVPVRLLTDE
CCCCEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCCCCEEEEEECC
ATVKPSLAPAVARWKVQYPSRPVEVRLSPARTLHDRAIFIDNAIAWTVTQSLKDLAKRSP
CCCCCCCCCHHHEEEEECCCCCEEEEECCCCHHCCEEEEECCCHHHHHHHHHHHHHHCCC
AELVRVDDTASLKISAYDALWHAAQLCP
CCEEEECCCCEEEEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA