| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is yihX [H]
Identifier: 86749922
GI number: 86749922
Start: 3196514
End: 3197140
Strand: Direct
Name: yihX [H]
Synonym: RPB_2805
Alternate gene names: 86749922
Gene position: 3196514-3197140 (Clockwise)
Preceding gene: 86749920
Following gene: 86749923
Centisome position: 59.95
GC content: 66.03
Gene sequence:
>627_bases ATGACAACCACTCTCACGCCCGGCGCGGCCGACGCGCTGTTGTTCGATCTCGGCCGCGTCGTGATCGACTTCGATCTCGC CCGCACGCTGAAAGCCTGGGCGGTCGAACTCGGCAGCGATCCGTCCGCGATGATGACGGCGCTGGCCCGCAACGACACCT TCCATCGCTATGAGACCGGTCACGTCACCGACGCGGAGTTCTTCGCCGCGGTGCGCGAGGCGCTGCGGCTCGAACTGTCC GACGATCAGTTGCGCGAGGGCTGGAACGCGATCTTCATCGGCGAGATGCCGGGCATCGCGCCGCTGCTCGAACGCGCCGC GCGGCATCTGCCGCTGTATGCGCTGTCCAACACCAATGACGCCCACATCGCGCATTTCTCGGAGCATTTCGCCGAGCTGC TGAAACCGTTCCGCGAACTGTTCCTGTCGTCGCGGATCGGCATGCGCAAACCCAATGCGGCAGCCTATGATCATGTCGTC AGGGCGATCGGCGTGCGGCCCGAGCGCATTGTGTTCTTCGACGATCTGGCGGAAAACATCGCGGCCGCGCGCGTGCGCGG GCTCCAGGCCGTGCATGTCCGCTCCAGCGCGGACGTGGCGCAGGCGCTGGATCAACTCGGGCTGTGA
Upstream 100 bases:
>100_bases CACAGCCAACTGATCCTTAACTCCCCGTCTTCGCGTCAAGGTCTCGTTCCGAATCGACCCCACCTCGCCATCGTTTCCCG CTCCTGCTAGGCCGTCTCAC
Downstream 100 bases:
>100_bases CGGCCCGCGCGAACGAGTACTGACAATTGCGATGACCGGCGACGCCACCGACCTCGACTGGGACCACCCGAACCCGTTCA CGCTGAGAATGGTGCCGGGA
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MTTTLTPGAADALLFDLGRVVIDFDLARTLKAWAVELGSDPSAMMTALARNDTFHRYETGHVTDAEFFAAVREALRLELS DDQLREGWNAIFIGEMPGIAPLLERAARHLPLYALSNTNDAHIAHFSEHFAELLKPFRELFLSSRIGMRKPNAAAYDHVV RAIGVRPERIVFFDDLAENIAAARVRGLQAVHVRSSADVAQALDQLGL
Sequences:
>Translated_208_residues MTTTLTPGAADALLFDLGRVVIDFDLARTLKAWAVELGSDPSAMMTALARNDTFHRYETGHVTDAEFFAAVREALRLELS DDQLREGWNAIFIGEMPGIAPLLERAARHLPLYALSNTNDAHIAHFSEHFAELLKPFRELFLSSRIGMRKPNAAAYDHVV RAIGVRPERIVFFDDLAENIAAARVRGLQAVHVRSSADVAQALDQLGL >Mature_207_residues TTTLTPGAADALLFDLGRVVIDFDLARTLKAWAVELGSDPSAMMTALARNDTFHRYETGHVTDAEFFAAVREALRLELSD DQLREGWNAIFIGEMPGIAPLLERAARHLPLYALSNTNDAHIAHFSEHFAELLKPFRELFLSSRIGMRKPNAAAYDHVVR AIGVRPERIVFFDDLAENIAAARVRGLQAVHVRSSADVAQALDQLGL
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrate beta-glucose 1-phosphate [H]
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. YihX family [H]
Homologues:
Organism=Escherichia coli, GI87082345, Length=191, Percent_Identity=33.5078534031414, Blast_Score=116, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 22991; Mature: 22860
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTLTPGAADALLFDLGRVVIDFDLARTLKAWAVELGSDPSAMMTALARNDTFHRYETG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEECCC HVTDAEFFAAVREALRLELSDDQLREGWNAIFIGEMPGIAPLLERAARHLPLYALSNTND CCCHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCEEEECCCCC AHIAHFSEHFAELLKPFRELFLSSRIGMRKPNAAAYDHVVRAIGVRPERIVFFDDLAENI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHH AAARVRGLQAVHVRSSADVAQALDQLGL HHHHHHCHHHEEECCHHHHHHHHHHHCC >Mature Secondary Structure TTTLTPGAADALLFDLGRVVIDFDLARTLKAWAVELGSDPSAMMTALARNDTFHRYETG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEECCC HVTDAEFFAAVREALRLELSDDQLREGWNAIFIGEMPGIAPLLERAARHLPLYALSNTND CCCHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCEEEECCCCC AHIAHFSEHFAELLKPFRELFLSSRIGMRKPNAAAYDHVVRAIGVRPERIVFFDDLAENI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHH AAARVRGLQAVHVRSSADVAQALDQLGL HHHHHHCHHHEEECCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]