Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86749905

Identifier: 86749905

GI number: 86749905

Start: 3177645

End: 3178577

Strand: Direct

Name: 86749905

Synonym: RPB_2788

Alternate gene names: NA

Gene position: 3177645-3178577 (Clockwise)

Preceding gene: 86749904

Following gene: 86749906

Centisome position: 59.6

GC content: 64.31

Gene sequence:

>933_bases
ATGAACGAGCGCTGGGACACGATCATCTCGCTGCTGCAGGAGCAGAGCTTCGCCGACGCCATGGCCAGCCTCGATGCGAT
CTCCCATGATGACCCAATCGACGTCGACGCCTATCTCCTGCGCGCCGTGGCGCAGAAGCAGCTCGGGCTCACGAAGGATG
CTGAAATCGAACTCTGGCGCGCGCTGGTCGTCGATCCCTGTGCCGCAGGGGTTCGGGCGGCGCTGGGCGATCTCTTCGTG
GAGGATCTGACCCAGCCCGGCCATCCGCATGACTTTCAGCTCGATAGCGGCGAGCGTCAGACCAGCCCACAGATCGACAT
GATCCGGCGCGATCACAGCGCGCGCTACGAGTTCGCTGCGCATTGGCTGCGAGCCCATCTGCAACCGCCACGCGACACCA
CCGGATTGGATATGTTCTGCGGCAACGGTTACGGCGCGCGGATCCTCGCCGATCGCTGCGGTGCGCGGATCGTCGGGATC
GACGGCTCGGCGCCGGCGGTCGCCCTCGCAGAGACGGCCTATGGCGGCCACCGTGTGGTCTTCCGGCAGGCCTGTTTCCC
GTTCGAGCTGACGAGAAACGCCGCCGACTTCGCTGTCTGCTTCGAATCCCTCGAGCACGTCGAGGATTGCGATGATTTCC
TCCGGCAAGTGGGCGCCGCGACACGAGGGCCGATACTGCTGTCGTTTCCGCTCGAAAGTGGACTACCCTTCGCCGTCAAC
CGCGACCTGTTCCGGTTTCACTTCCGGCACTTCAAGGCGGACGAAATCGCCGAGAGGCTGCTGCGGCTGACCGGCCGGCG
CGTCATCGAGATGCGCGGGCAGATCGTCTATCGGATCGAGAAGGGCCGTATGAGCGGTCTGCTGGACCCATCACAGATGG
AACTGACGCGCCTCGAGGACGACAGCCAGTTCGGGATCGTGATCGCAATCTGA

Upstream 100 bases:

>100_bases
ACATCCTATCGAAAACGCCGTCTTCGCTGGAAAAGGATCGCCTGAGGCGTGCGCTGAATGCCGACTGGGGCTTCGGGCAT
ATCGACAGGGTCGTCGCCTG

Downstream 100 bases:

>100_bases
AACCAGGTGACGACGCCCTGCCGCCTGGCCCGCAGCCGCGGTCACGCCGACATTCCCATGCTATTGTGGAGTGGACGGCA
GTGAGCCACACGGGGCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MNERWDTIISLLQEQSFADAMASLDAISHDDPIDVDAYLLRAVAQKQLGLTKDAEIELWRALVVDPCAAGVRAALGDLFV
EDLTQPGHPHDFQLDSGERQTSPQIDMIRRDHSARYEFAAHWLRAHLQPPRDTTGLDMFCGNGYGARILADRCGARIVGI
DGSAPAVALAETAYGGHRVVFRQACFPFELTRNAADFAVCFESLEHVEDCDDFLRQVGAATRGPILLSFPLESGLPFAVN
RDLFRFHFRHFKADEIAERLLRLTGRRVIEMRGQIVYRIEKGRMSGLLDPSQMELTRLEDDSQFGIVIAI

Sequences:

>Translated_310_residues
MNERWDTIISLLQEQSFADAMASLDAISHDDPIDVDAYLLRAVAQKQLGLTKDAEIELWRALVVDPCAAGVRAALGDLFV
EDLTQPGHPHDFQLDSGERQTSPQIDMIRRDHSARYEFAAHWLRAHLQPPRDTTGLDMFCGNGYGARILADRCGARIVGI
DGSAPAVALAETAYGGHRVVFRQACFPFELTRNAADFAVCFESLEHVEDCDDFLRQVGAATRGPILLSFPLESGLPFAVN
RDLFRFHFRHFKADEIAERLLRLTGRRVIEMRGQIVYRIEKGRMSGLLDPSQMELTRLEDDSQFGIVIAI
>Mature_310_residues
MNERWDTIISLLQEQSFADAMASLDAISHDDPIDVDAYLLRAVAQKQLGLTKDAEIELWRALVVDPCAAGVRAALGDLFV
EDLTQPGHPHDFQLDSGERQTSPQIDMIRRDHSARYEFAAHWLRAHLQPPRDTTGLDMFCGNGYGARILADRCGARIVGI
DGSAPAVALAETAYGGHRVVFRQACFPFELTRNAADFAVCFESLEHVEDCDDFLRQVGAATRGPILLSFPLESGLPFAVN
RDLFRFHFRHFKADEIAERLLRLTGRRVIEMRGQIVYRIEKGRMSGLLDPSQMELTRLEDDSQFGIVIAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34712; Mature: 34712

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNERWDTIISLLQEQSFADAMASLDAISHDDPIDVDAYLLRAVAQKQLGLTKDAEIELWR
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH
ALVVDPCAAGVRAALGDLFVEDLTQPGHPHDFQLDSGERQTSPQIDMIRRDHSARYEFAA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHH
HWLRAHLQPPRDTTGLDMFCGNGYGARILADRCGARIVGIDGSAPAVALAETAYGGHRVV
HHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHCCCEEEEECCCCCCEEEHHHCCCCCEEE
FRQACFPFELTRNAADFAVCFESLEHVEDCDDFLRQVGAATRGPILLSFPLESGLPFAVN
HHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHC
RDLFRFHFRHFKADEIAERLLRLTGRRVIEMRGQIVYRIEKGRMSGLLDPSQMELTRLED
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHCCCC
DSQFGIVIAI
CCCCCEEEEC
>Mature Secondary Structure
MNERWDTIISLLQEQSFADAMASLDAISHDDPIDVDAYLLRAVAQKQLGLTKDAEIELWR
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH
ALVVDPCAAGVRAALGDLFVEDLTQPGHPHDFQLDSGERQTSPQIDMIRRDHSARYEFAA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHH
HWLRAHLQPPRDTTGLDMFCGNGYGARILADRCGARIVGIDGSAPAVALAETAYGGHRVV
HHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHCCCEEEEECCCCCCEEEHHHCCCCCEEE
FRQACFPFELTRNAADFAVCFESLEHVEDCDDFLRQVGAATRGPILLSFPLESGLPFAVN
HHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHC
RDLFRFHFRHFKADEIAERLLRLTGRRVIEMRGQIVYRIEKGRMSGLLDPSQMELTRLED
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHCCCC
DSQFGIVIAI
CCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA