| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is erpA2 [H]
Identifier: 86749869
GI number: 86749869
Start: 3137380
End: 3137712
Strand: Direct
Name: erpA2 [H]
Synonym: RPB_2752
Alternate gene names: 86749869
Gene position: 3137380-3137712 (Clockwise)
Preceding gene: 86749857
Following gene: 86749870
Centisome position: 58.84
GC content: 66.97
Gene sequence:
>333_bases ATGACCGACTCAAGCGTCACCATCAGCGAACGGGCGGCGCGCCGGATCGGCGAGATCCTGAAGGGCGAAGGCGACGGCGC GATGCTGCGGATCAGCGTCGAGGGCGGCGGCTGCTCGGGATTCCAGTACAAGTTCGACGTCGATCGCGCCCGGACCGACG ACGACGTCGTTATCGCACGCGACGGCGCCGTCGTGCTGGTCGATTCCGCCTCGGCGCCGTTCCTCGCCGGCTCGGAAGTC GACTTCGTCGACGACCTGATTGGCGCGTCGTTCCGGGTCAACAACCCGAACGCCACCGCATCCTGCGGCTGCGGGACGAG TTTCTCGATCTGA
Upstream 100 bases:
>100_bases GACCCCCGACCCGTTTGATTCTGCGGCAGGGTGCACTTAACTATGGCTTGCATGGAAATCCAATGACGGCACAATCCCCG CAGGGGATATGGAGCGACAC
Downstream 100 bases:
>100_bases CACCCTTTGAACGGAGCGCGCGCCGCTTGGTTTGCTGCTCCCCGGAGCAGAAAATTGGGCTGTCGATGCTGAGACGCTGC GTCAAGAAAAACGCAGCACA
Product: HesB/YadR/YfhF
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MTDSSVTISERAARRIGEILKGEGDGAMLRISVEGGGCSGFQYKFDVDRARTDDDVVIARDGAVVLVDSASAPFLAGSEV DFVDDLIGASFRVNNPNATASCGCGTSFSI
Sequences:
>Translated_110_residues MTDSSVTISERAARRIGEILKGEGDGAMLRISVEGGGCSGFQYKFDVDRARTDDDVVIARDGAVVLVDSASAPFLAGSEV DFVDDLIGASFRVNNPNATASCGCGTSFSI >Mature_109_residues TDSSVTISERAARRIGEILKGEGDGAMLRISVEGGGCSGFQYKFDVDRARTDDDVVIARDGAVVLVDSASAPFLAGSEVD FVDDLIGASFRVNNPNATASCGCGTSFSI
Specific function: Required for insertion of 4Fe-4S clusters for at least ispG [H]
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family [H]
Homologues:
Organism=Homo sapiens, GI160420328, Length=109, Percent_Identity=46.7889908256881, Blast_Score=98, Evalue=2e-21, Organism=Homo sapiens, GI52426768, Length=109, Percent_Identity=31.1926605504587, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1786351, Length=106, Percent_Identity=39.622641509434, Blast_Score=87, Evalue=2e-19, Organism=Escherichia coli, GI1788877, Length=106, Percent_Identity=38.6792452830189, Blast_Score=82, Evalue=6e-18, Organism=Escherichia coli, GI1787974, Length=105, Percent_Identity=35.2380952380952, Blast_Score=76, Evalue=5e-16, Organism=Caenorhabditis elegans, GI71998452, Length=112, Percent_Identity=42.8571428571429, Blast_Score=98, Evalue=7e-22, Organism=Caenorhabditis elegans, GI25146411, Length=110, Percent_Identity=33.6363636363636, Blast_Score=78, Evalue=9e-16, Organism=Caenorhabditis elegans, GI193209025, Length=107, Percent_Identity=33.6448598130841, Blast_Score=77, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6325324, Length=128, Percent_Identity=35.9375, Blast_Score=81, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6323001, Length=105, Percent_Identity=31.4285714285714, Blast_Score=74, Evalue=6e-15, Organism=Drosophila melanogaster, GI24649697, Length=107, Percent_Identity=47.6635514018692, Blast_Score=98, Evalue=1e-21, Organism=Drosophila melanogaster, GI24642263, Length=109, Percent_Identity=33.9449541284404, Blast_Score=78, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR023063 [H]
Pfam domain/function: PF01521 Fe-S_biosyn [H]
EC number: NA
Molecular weight: Translated: 11427; Mature: 11296
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSSVTISERAARRIGEILKGEGDGAMLRISVEGGGCSGFQYKFDVDRARTDDDVVIAR CCCCCEEHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEC DGAVVLVDSASAPFLAGSEVDFVDDLIGASFRVNNPNATASCGCGTSFSI CCCEEEEECCCCCEEECCCCCHHHHHCCCEEEECCCCCCEECCCCCCCCC >Mature Secondary Structure TDSSVTISERAARRIGEILKGEGDGAMLRISVEGGGCSGFQYKFDVDRARTDDDVVIAR CCCCEEHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEC DGAVVLVDSASAPFLAGSEVDFVDDLIGASFRVNNPNATASCGCGTSFSI CCCEEEEECCCCCEEECCCCCHHHHHCCCEEEECCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA