Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is 86749745

Identifier: 86749745

GI number: 86749745

Start: 3010283

End: 3010498

Strand: Direct

Name: 86749745

Synonym: RPB_2628

Alternate gene names: NA

Gene position: 3010283-3010498 (Clockwise)

Preceding gene: 86749744

Following gene: 86749746

Centisome position: 56.46

GC content: 62.04

Gene sequence:

>216_bases
ATGCAACGAGCCGTCGAACGCGTGATCCAGACCTACGGGCTGCTGACCAGCCGCGAAGCCGCGGAACAGGCGCAGGTCAA
GGTCGAAAGCTACATCCGCACGCTGTTCGAGGCCGGCGAGACCGATGACAACCGCTTGACCGTCTGTGGTCTGGTGTATC
TTCGCGAGCTCGACGGCAGTAATGATCCGGTCAAGGCGGGCTTCACCGGTCTCTGA

Upstream 100 bases:

>100_bases
AGATGTTCCATCGCGGTGAGACCAATCCCATCAAGCTCGCCAACAAGGCGATTTCAAACTTCGAAGCCGCCAAGATGGCG
GCGTGAATCAGAGGCACCGC

Downstream 100 bases:

>100_bases
AGCAATCGGTGTGATTGATCGGAGCCGAGGCAGTTCTTTCTGTTTTTGCGCGAGCCGACATCAATTTCGATGAAGACGCT
CTGAAATGGAGTGGTGAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MQRAVERVIQTYGLLTSREAAEQAQVKVESYIRTLFEAGETDDNRLTVCGLVYLRELDGSNDPVKAGFTGL

Sequences:

>Translated_71_residues
MQRAVERVIQTYGLLTSREAAEQAQVKVESYIRTLFEAGETDDNRLTVCGLVYLRELDGSNDPVKAGFTGL
>Mature_71_residues
MQRAVERVIQTYGLLTSREAAEQAQVKVESYIRTLFEAGETDDNRLTVCGLVYLRELDGSNDPVKAGFTGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7894; Mature: 7894

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRAVERVIQTYGLLTSREAAEQAQVKVESYIRTLFEAGETDDNRLTVCGLVYLRELDGS
CCHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC
NDPVKAGFTGL
CCCCCCCCCCC
>Mature Secondary Structure
MQRAVERVIQTYGLLTSREAAEQAQVKVESYIRTLFEAGETDDNRLTVCGLVYLRELDGS
CCHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC
NDPVKAGFTGL
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA