Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86749603
Identifier: 86749603
GI number: 86749603
Start: 2841625
End: 2842161
Strand: Direct
Name: 86749603
Synonym: RPB_2483
Alternate gene names: NA
Gene position: 2841625-2842161 (Clockwise)
Preceding gene: 86749602
Following gene: 86749605
Centisome position: 53.3
GC content: 69.65
Gene sequence:
>537_bases GTGCAACACAAGCTTCCTTACAGGCCAGTCCTGCTCACCCTGGTGCTGGCGACCCCGCTGCTCGCCGGCTGTGCTGGCGG CTCGGACCTGCTGTCACGCGATGCCGACTGGTTTGCGCGGCCGGGCCGGGTTTTCATCAAGAACATCTCGATCGAGACGC CGCCGCTGACACCCGACAAAGCGGTGACGGCGGAAGACCTGATCTCCGCCGACGGCATGTGTCCGGGCATGGCCCAGCCC GGCGCGGCCGACGCCAACGCCAACGCGCAGGGGGGCGACCCTGCCGCTTCGACGATGGCGCGTGGCGGCACGGTGGCGCT CGGCCACACCGAATGCGACGTCGCCCGCGGCGCCGGTGCGCCTGACGGCGTCAACCTCTCGACCAACGAGCGTGGCCAGC GCGTCGCACTGCTGACCTATTCGCGTGGTCCGCGCGCCGGAATCTATACCTTCACTGCAGGGCGGCTGACGTCGATCGAA CGCGCACCGGAGCCGGCGCCGCAACCGCGAGCCGCGAAGAAGCGCAGTAGGTCGTAG
Upstream 100 bases:
>100_bases TTATTCTGGTATCCTTGCAACTGCGCGGAGCCGGTCACGGTCGTGCCGTAAATCGATGTTTGGACAGATGCTTACGCTGC GGGATGGGACCCAATCGATC
Downstream 100 bases:
>100_bases CGGCGACGCTACCGCCACGGCCGTAAGCTTCGCGTCTCAGCCTTGCGCCTTGTCGTAGGCCGAGCTCGCGTCCAGCCATT GTTCCTCGGCCTTCTGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MQHKLPYRPVLLTLVLATPLLAGCAGGSDLLSRDADWFARPGRVFIKNISIETPPLTPDKAVTAEDLISADGMCPGMAQP GAADANANAQGGDPAASTMARGGTVALGHTECDVARGAGAPDGVNLSTNERGQRVALLTYSRGPRAGIYTFTAGRLTSIE RAPEPAPQPRAAKKRSRS
Sequences:
>Translated_178_residues MQHKLPYRPVLLTLVLATPLLAGCAGGSDLLSRDADWFARPGRVFIKNISIETPPLTPDKAVTAEDLISADGMCPGMAQP GAADANANAQGGDPAASTMARGGTVALGHTECDVARGAGAPDGVNLSTNERGQRVALLTYSRGPRAGIYTFTAGRLTSIE RAPEPAPQPRAAKKRSRS >Mature_178_residues MQHKLPYRPVLLTLVLATPLLAGCAGGSDLLSRDADWFARPGRVFIKNISIETPPLTPDKAVTAEDLISADGMCPGMAQP GAADANANAQGGDPAASTMARGGTVALGHTECDVARGAGAPDGVNLSTNERGQRVALLTYSRGPRAGIYTFTAGRLTSIE RAPEPAPQPRAAKKRSRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18460; Mature: 18460
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHKLPYRPVLLTLVLATPLLAGCAGGSDLLSRDADWFARPGRVFIKNISIETPPLTPDK CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHCCCCEEEEEECCCCCCCCCCCC AVTAEDLISADGMCPGMAQPGAADANANAQGGDPAASTMARGGTVALGHTECDVARGAGA CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECCCHHHHHCCCCC PDGVNLSTNERGQRVALLTYSRGPRAGIYTFTAGRLTSIERAPEPAPQPRAAKKRSRS CCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCHHHHCCCCCCCCCCHHHHCCCC >Mature Secondary Structure MQHKLPYRPVLLTLVLATPLLAGCAGGSDLLSRDADWFARPGRVFIKNISIETPPLTPDK CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHCCCCEEEEEECCCCCCCCCCCC AVTAEDLISADGMCPGMAQPGAADANANAQGGDPAASTMARGGTVALGHTECDVARGAGA CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECCCHHHHHCCCCC PDGVNLSTNERGQRVALLTYSRGPRAGIYTFTAGRLTSIERAPEPAPQPRAAKKRSRS CCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCHHHHCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA