Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is yjgQ [C]
Identifier: 86749600
GI number: 86749600
Start: 2837966
End: 2839132
Strand: Reverse
Name: yjgQ [C]
Synonym: RPB_2480
Alternate gene names: 86749600
Gene position: 2839132-2837966 (Counterclockwise)
Preceding gene: 86749604
Following gene: 86749599
Centisome position: 53.25
GC content: 63.07
Gene sequence:
>1167_bases ATGGGCTCCATCGATAGCTATATTTTCCGCACGACTCTGACGTCGTTCGCGGTCGTCATGGCCAGCCTCACCGGCGTGAT CTGGATCACCCAGGCTTTGCGTGGCATCGATTTGATGACCAGCCAGGGCCAGACCATCGTGACCTTCCTCGGCCTGACCG GCCTTGCGGTGCCCGTCCTGATCCTGGTGATCGCCCCGATCGCGCTGATGATCGCGGTGGCGCATACGCTGAACCGACTC GCCACCGACTCCGAAATCATCGTGATGAACGCCGCCGGCCTGTCACCGCTGCGACTGTTTCGGCCGTTCGTCTATGCCAC GATCTTCGTCGCTGCACTCGTCACTCTGATCGGCTCTTATATCGCGCCGGACGGGTTGCGCCGCATCGCCCGGTGGGACG CCGAGATCACCGCCGACGTGCTTGCCAACGTGCTGCAGCCGGGCCGCTTCGCGCAGCTCGAGCAAAATCTGACGATCCGC GTTCGCGAGCGGCAGGCGGGCGGGCTTCTCGTCGGTGTGTTCATCGATGACCGCCGCGATCCCGCCGATCGCGTCAGCAT CATCGCCGACCACGGCACGGTGCTGAAGAACAAGGATGGCTCCTTCCTCGTGCTCGAGGACGGCCATTTGGAGCGGTTTC AGGGCGGAAAGCAGGAGCCGACGCTGGTCGCCTTCAGCCGCTACGCCTTCGATATGTCGAAATTCTCGCGAGCCCGCGAC GTCGCCTATGGAATTCGCGAGCATTACCTGTGGGAATTGATCTGGCCGGATCCGAAGGATCCTCTGCTGGCACAATTGCC GACCCAATTCCGCTCGGAGATGCACGATCGCCTGCTGGCGCCGATCTATCCGTTCTTCTTCGCAGCGGTCACGTTCGCGT TCTTGGGCATGCCGCGAACCACGCGCCAGAGTCGAAACTTCTCGATGATCGGCGCTGTTCTGTGCGCGTTCGTCGTCAGG CTCGCGGGATTTGCGCTGTCGGTGGTCGCCAACCACACGCCTTATATCGCCGGCCTGCAATATCTGCTGCTCGCCGTTGC AATTGCCGCCAGCGTCTGGCTGATCCGGCGCAACGTGGTGATCGAACCGCCGACCCTTTTGGTCGACGCGTTCAACGCCC TCACCGCTTCGCTCAGCCGGCTGGTCCGGCGGCCGATGCCGGCGTGA
Upstream 100 bases:
>100_bases GTAATGCGATCGTGGGACAGCCCGCACGATCGCCGCCTGGGGAGGATTCGGATCGAATCCTGGCGGGGATCGAATTGGGC GCAGGGGATTTCGCCGGCCG
Downstream 100 bases:
>100_bases TGCGGTGCCCGCCATGGTCTTGAACACGCTCGGACGCTATTTCGCTGCCCGGTTCGTCTCGTCGGCTCTCGGCGTGTTCT TCGGCCTGTTCGTGTTGCTG
Product: permease YjgP/YjgQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MGSIDSYIFRTTLTSFAVVMASLTGVIWITQALRGIDLMTSQGQTIVTFLGLTGLAVPVLILVIAPIALMIAVAHTLNRL ATDSEIIVMNAAGLSPLRLFRPFVYATIFVAALVTLIGSYIAPDGLRRIARWDAEITADVLANVLQPGRFAQLEQNLTIR VRERQAGGLLVGVFIDDRRDPADRVSIIADHGTVLKNKDGSFLVLEDGHLERFQGGKQEPTLVAFSRYAFDMSKFSRARD VAYGIREHYLWELIWPDPKDPLLAQLPTQFRSEMHDRLLAPIYPFFFAAVTFAFLGMPRTTRQSRNFSMIGAVLCAFVVR LAGFALSVVANHTPYIAGLQYLLLAVAIAASVWLIRRNVVIEPPTLLVDAFNALTASLSRLVRRPMPA
Sequences:
>Translated_388_residues MGSIDSYIFRTTLTSFAVVMASLTGVIWITQALRGIDLMTSQGQTIVTFLGLTGLAVPVLILVIAPIALMIAVAHTLNRL ATDSEIIVMNAAGLSPLRLFRPFVYATIFVAALVTLIGSYIAPDGLRRIARWDAEITADVLANVLQPGRFAQLEQNLTIR VRERQAGGLLVGVFIDDRRDPADRVSIIADHGTVLKNKDGSFLVLEDGHLERFQGGKQEPTLVAFSRYAFDMSKFSRARD VAYGIREHYLWELIWPDPKDPLLAQLPTQFRSEMHDRLLAPIYPFFFAAVTFAFLGMPRTTRQSRNFSMIGAVLCAFVVR LAGFALSVVANHTPYIAGLQYLLLAVAIAASVWLIRRNVVIEPPTLLVDAFNALTASLSRLVRRPMPA >Mature_387_residues GSIDSYIFRTTLTSFAVVMASLTGVIWITQALRGIDLMTSQGQTIVTFLGLTGLAVPVLILVIAPIALMIAVAHTLNRLA TDSEIIVMNAAGLSPLRLFRPFVYATIFVAALVTLIGSYIAPDGLRRIARWDAEITADVLANVLQPGRFAQLEQNLTIRV RERQAGGLLVGVFIDDRRDPADRVSIIADHGTVLKNKDGSFLVLEDGHLERFQGGKQEPTLVAFSRYAFDMSKFSRARDV AYGIREHYLWELIWPDPKDPLLAQLPTQFRSEMHDRLLAPIYPFFFAAVTFAFLGMPRTTRQSRNFSMIGAVLCAFVVRL AGFALSVVANHTPYIAGLQYLLLAVAIAASVWLIRRNVVIEPPTLLVDAFNALTASLSRLVRRPMPA
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005495 [H]
Pfam domain/function: PF03739 YjgP_YjgQ [H]
EC number: NA
Molecular weight: Translated: 42826; Mature: 42695
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSIDSYIFRTTLTSFAVVMASLTGVIWITQALRGIDLMTSQGQTIVTFLGLTGLAVPVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEHHHHHHHHHHHHHH ILVIAPIALMIAVAHTLNRLATDSEIIVMNAAGLSPLRLFRPFVYATIFVAALVTLIGSY HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IAPDGLRRIARWDAEITADVLANVLQPGRFAQLEQNLTIRVRERQAGGLLVGVFIDDRRD HCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEEECCCCEEEEEEEECCCC PADRVSIIADHGTVLKNKDGSFLVLEDGHLERFQGGKQEPTLVAFSRYAFDMSKFSRARD CHHHHEEEECCCCEEECCCCCEEEEECCCHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHH VAYGIREHYLWELIWPDPKDPLLAQLPTQFRSEMHDRLLAPIYPFFFAAVTFAFLGMPRT HHHHHHHHHEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TRQSRNFSMIGAVLCAFVVRLAGFALSVVANHTPYIAGLQYLLLAVAIAASVWLIRRNVV HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEE IEPPTLLVDAFNALTASLSRLVRRPMPA ECCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GSIDSYIFRTTLTSFAVVMASLTGVIWITQALRGIDLMTSQGQTIVTFLGLTGLAVPVL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEHHHHHHHHHHHHHH ILVIAPIALMIAVAHTLNRLATDSEIIVMNAAGLSPLRLFRPFVYATIFVAALVTLIGSY HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IAPDGLRRIARWDAEITADVLANVLQPGRFAQLEQNLTIRVRERQAGGLLVGVFIDDRRD HCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEEECCCCEEEEEEEECCCC PADRVSIIADHGTVLKNKDGSFLVLEDGHLERFQGGKQEPTLVAFSRYAFDMSKFSRARD CHHHHEEEECCCCEEECCCCCEEEEECCCHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHH VAYGIREHYLWELIWPDPKDPLLAQLPTQFRSEMHDRLLAPIYPFFFAAVTFAFLGMPRT HHHHHHHHHEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TRQSRNFSMIGAVLCAFVVRLAGFALSVVANHTPYIAGLQYLLLAVAIAASVWLIRRNVV HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEE IEPPTLLVDAFNALTASLSRLVRRPMPA ECCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]