Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86749557
Identifier: 86749557
GI number: 86749557
Start: 2792861
End: 2793148
Strand: Reverse
Name: 86749557
Synonym: RPB_2437
Alternate gene names: NA
Gene position: 2793148-2792861 (Counterclockwise)
Preceding gene: 86749563
Following gene: 86749556
Centisome position: 52.39
GC content: 58.68
Gene sequence:
>288_bases ATGTCCATCTCATTCGATCCGGCAAAGCGGGATTGGACCCGGCGACATCGTGGTCTCGACTTTGCCACCGACGCCGCAAC GGCATTTGCCGGACGTATCGTGACGAAGCTCGACGATCGCTTCGACTACGGCGAGAACCGCTACATCACCGCCGGATACG TCGGTTCACGCATGGTCGTGATCGTCTGGACGCCACGAGACGGCGACCATCATGTGATTTCGATGAGGTATTGCCATGCC AAGGAAGAAGTCCGCTGGGCCGCCCTCTTTCGGCAAGCCTTTGACTGA
Upstream 100 bases:
>100_bases GCTAGCACAGCGCCTTCGACAATTGAAGCGATTGTGCCGCTTTGGCTGGCGCGGCTAGAGTCGGGCATTGACGTTTCGAA TATTGTAGTTACATAATTGC
Downstream 100 bases:
>100_bases CGATCCCGATGATGCGCCCGAATTACTCGACGAATTCTTCCGCACCGGCGAAATTCGCATCGGCGGCAAGATCGTCCGCC GTGGTCGGCCCCCGCTCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MSISFDPAKRDWTRRHRGLDFATDAATAFAGRIVTKLDDRFDYGENRYITAGYVGSRMVVIVWTPRDGDHHVISMRYCHA KEEVRWAALFRQAFD
Sequences:
>Translated_95_residues MSISFDPAKRDWTRRHRGLDFATDAATAFAGRIVTKLDDRFDYGENRYITAGYVGSRMVVIVWTPRDGDHHVISMRYCHA KEEVRWAALFRQAFD >Mature_94_residues SISFDPAKRDWTRRHRGLDFATDAATAFAGRIVTKLDDRFDYGENRYITAGYVGSRMVVIVWTPRDGDHHVISMRYCHAK EEVRWAALFRQAFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11070; Mature: 10938
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISFDPAKRDWTRRHRGLDFATDAATAFAGRIVTKLDDRFDYGENRYITAGYVGSRMVV CCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEE IVWTPRDGDHHVISMRYCHAKEEVRWAALFRQAFD EEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHCC >Mature Secondary Structure SISFDPAKRDWTRRHRGLDFATDAATAFAGRIVTKLDDRFDYGENRYITAGYVGSRMVV CCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEE IVWTPRDGDHHVISMRYCHAKEEVRWAALFRQAFD EEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA