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The map label for this gene is gatC

Identifier: 86749554

GI number: 86749554

Start: 2792121

End: 2792408

Strand: Direct

Name: gatC

Synonym: RPB_2434

Alternate gene names: 86749554

Gene position: 2792121-2792408 (Clockwise)

Preceding gene: 86749553

Following gene: 86749555

Centisome position: 52.37

GC content: 63.89

Gene sequence:

>288_bases
ATGTCGGTCGATGCCGCCACCGTCCGTCGTATCGCGCATCTGGCGCGGATCGCCGTGACCGACGACGAGGTCCCGCATCT
GCAGGGCGAACTGAATGCGATGCTGGCCTTCGTCGAGCAGCTCTCGGAGGTCGATGTCGACGGCGTCGAGCCGATGACCT
CGGTGACGCCGATGCAGATGAAGAAGCGTGCGGACGTCGTCAATGACGGCGAGATCGCCGATCAGGTGGTGGCCAACGCG
CCGGCGACGGAAGATCACTTCTTCCTGGTGCCGAAGGTGGTCGAATAG

Upstream 100 bases:

>100_bases
CGGCTCGCCGGCTGATCCGGCCGAGCGGGCTGAGGTTGCGGCGCGAAAGCCGGCTCTGCTATACGGCACAGGTCGCCACT
TCCGGGAAAGGCCTTACATA

Downstream 100 bases:

>100_bases
GAGCCCGCCGATGTGCCTGCTGTGCGACGACGAGAAGGCCTATCAGGCCTATATGGACTACCTCGACGCCATGGAGCGGC
AAGGCAAGGTCGCTGACCCC

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MSVDAATVRRIAHLARIAVTDDEVPHLQGELNAMLAFVEQLSEVDVDGVEPMTSVTPMQMKKRADVVNDGEIADQVVANA
PATEDHFFLVPKVVE

Sequences:

>Translated_95_residues
MSVDAATVRRIAHLARIAVTDDEVPHLQGELNAMLAFVEQLSEVDVDGVEPMTSVTPMQMKKRADVVNDGEIADQVVANA
PATEDHFFLVPKVVE
>Mature_94_residues
SVDAATVRRIAHLARIAVTDDEVPHLQGELNAMLAFVEQLSEVDVDGVEPMTSVTPMQMKKRADVVNDGEIADQVVANAP
ATEDHFFLVPKVVE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_RHOP2 (Q2IXC1)

Other databases:

- EMBL:   CP000250
- RefSeq:   YP_486050.1
- ProteinModelPortal:   Q2IXC1
- SMR:   Q2IXC1
- STRING:   Q2IXC1
- GeneID:   3909568
- GenomeReviews:   CP000250_GR
- KEGG:   rpb:RPB_2434
- eggNOG:   COG0721
- HOGENOM:   HBG586403
- OMA:   SVTPMAM
- ProtClustDB:   PRK00034
- BioCyc:   RPAL316058:RPB_2434-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10341; Mature: 10210

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVDAATVRRIAHLARIAVTDDEVPHLQGELNAMLAFVEQLSEVDVDGVEPMTSVTPMQM
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
KKRADVVNDGEIADQVVANAPATEDHFFLVPKVVE
HHHCCCCCCCHHHHHHHHCCCCCCCCEEECCEECC
>Mature Secondary Structure 
SVDAATVRRIAHLARIAVTDDEVPHLQGELNAMLAFVEQLSEVDVDGVEPMTSVTPMQM
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
KKRADVVNDGEIADQVVANAPATEDHFFLVPKVVE
HHHCCCCCCCHHHHHHHHCCCCCCCCEEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA