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The map label for this gene is ydhM [C]

Identifier: 86749551

GI number: 86749551

Start: 2789056

End: 2789700

Strand: Direct

Name: ydhM [C]

Synonym: RPB_2431

Alternate gene names: 86749551

Gene position: 2789056-2789700 (Clockwise)

Preceding gene: 86749550

Following gene: 86749553

Centisome position: 52.31

GC content: 67.13

Gene sequence:

>645_bases
ATGCGAAAGACGAGGGAACAGAGCCGGCTGGAGACGCGGGAACGGCTGATTGCTTCGGCCCATGCGGCGATCAGGCGTGA
CGGCATCGGCGGTCTGTCGCTGCGCCGGCTGTGCGAGGAGGCCGGCTATTCCCAGGGCGCGTTCTACTCCAACTTCGCCA
GTCGCGACGACCTGCTGCTGGTGCTGATGGAGCGACACGTGCTCGGCGAAGTGGAAACGCTTCGGCGCCTGGTCCAGGTG
ATGGACGGCGAGGCTCTGGGCGACGTGCCCGCAACGGTGGCCGCGCGCCTCGCCGATCTGGCGCAACAGACCGAATGGTC
GCTGCTGTCCATCGAACTGCAACTGCACGCCCAGCGCGATGCCCGCTTCGCCGACGCCTACAACGCGGCGAAGATCAGCT
ATCATGCCGAGTTCGCGCGGCTGGTCGAGGACATCCTGCAACGTCACAACCTCGCGCCGGCGCTGCCGCCGCTGCAGATC
GGCATCGGTCTCTACGCGCTGTGGTCGGGCCTGGCCGTGCAGGGCACCGTTCCGGGTGCCGGGCCGCGCGATGAAATCTT
TCTTGCCTTTCTACGCGCCGTGATCGGCGGATCACCATCGCCCGCTGACGGGAGACAGCCGTCCGCCGATCAGTCGGCAT
CGTGA

Upstream 100 bases:

>100_bases
ACCGGATGCGGGACGGACTGAGAGACACGTCGAAATAACGACGAGCGGAAGGAAGCCGGCGCGCCGCTTCCTTCCGCGCG
CGTTGCAACGGATCGATCGA

Downstream 100 bases:

>100_bases
GAACCGCGGATCAGCGGATCGCGACCGGGTTGATCATGCTCTGCACCGCGCCCTTGAACCGCGGCTGGCCGAGCACGAAC
ATGAACTCGTAGACCTTGTC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator; Transcriptional Regulator Tetr Family; Regulatory Protein; Transcription Regulator Protein; TetR Family Regulatory Protein

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MRKTREQSRLETRERLIASAHAAIRRDGIGGLSLRRLCEEAGYSQGAFYSNFASRDDLLLVLMERHVLGEVETLRRLVQV
MDGEALGDVPATVAARLADLAQQTEWSLLSIELQLHAQRDARFADAYNAAKISYHAEFARLVEDILQRHNLAPALPPLQI
GIGLYALWSGLAVQGTVPGAGPRDEIFLAFLRAVIGGSPSPADGRQPSADQSAS

Sequences:

>Translated_214_residues
MRKTREQSRLETRERLIASAHAAIRRDGIGGLSLRRLCEEAGYSQGAFYSNFASRDDLLLVLMERHVLGEVETLRRLVQV
MDGEALGDVPATVAARLADLAQQTEWSLLSIELQLHAQRDARFADAYNAAKISYHAEFARLVEDILQRHNLAPALPPLQI
GIGLYALWSGLAVQGTVPGAGPRDEIFLAFLRAVIGGSPSPADGRQPSADQSAS
>Mature_214_residues
MRKTREQSRLETRERLIASAHAAIRRDGIGGLSLRRLCEEAGYSQGAFYSNFASRDDLLLVLMERHVLGEVETLRRLVQV
MDGEALGDVPATVAARLADLAQQTEWSLLSIELQLHAQRDARFADAYNAAKISYHAEFARLVEDILQRHNLAPALPPLQI
GIGLYALWSGLAVQGTVPGAGPRDEIFLAFLRAVIGGSPSPADGRQPSADQSAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23341; Mature: 23341

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKTREQSRLETRERLIASAHAAIRRDGIGGLSLRRLCEEAGYSQGAFYSNFASRDDLLL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCHHHH
VLMERHVLGEVETLRRLVQVMDGEALGDVPATVAARLADLAQQTEWSLLSIELQLHAQRD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCHH
ARFADAYNAAKISYHAEFARLVEDILQRHNLAPALPPLQIGIGLYALWSGLAVQGTVPGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCC
GPRDEIFLAFLRAVIGGSPSPADGRQPSADQSAS
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKTREQSRLETRERLIASAHAAIRRDGIGGLSLRRLCEEAGYSQGAFYSNFASRDDLLL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCHHHH
VLMERHVLGEVETLRRLVQVMDGEALGDVPATVAARLADLAQQTEWSLLSIELQLHAQRD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCHH
ARFADAYNAAKISYHAEFARLVEDILQRHNLAPALPPLQIGIGLYALWSGLAVQGTVPGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCC
GPRDEIFLAFLRAVIGGSPSPADGRQPSADQSAS
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA