Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86749477
Identifier: 86749477
GI number: 86749477
Start: 2710591
End: 2710941
Strand: Reverse
Name: 86749477
Synonym: RPB_2357
Alternate gene names: NA
Gene position: 2710941-2710591 (Counterclockwise)
Preceding gene: 86749478
Following gene: 86749468
Centisome position: 50.85
GC content: 65.53
Gene sequence:
>351_bases ATGAGGAACGGTCTGTATTCGATCCACGCCGATCTGCTGGACGGCCGCTCCGGCAAGGGCAGCGGCGTCGCTCTGTTCCG AAACGGCAAGATCCTCGGCGGCGACGCGTATCTGTTCTACACCGGCAGCTACGTCACCACCGGCGACACCTTCAAGGGCG AGGTCACGGTCAGCCAGCACACGCCGAGCCCCGACGCCAATCCGCTGTTCGGCGGTCAGAAAGAACCCGTCGGCATCGGC GTTTCGGGAAGCTGGACCGAGACCTCGGCGGTGATGCAGGGCACGGCGCTGGTCGGCAAATCGAGCCAGCTGTTCCGGGC AACTCTGCGCTGGCTGGCAGAGGCCGACTGA
Upstream 100 bases:
>100_bases CCCGCCAGTGCCTTCGCGTGATCCTGTCACGTTGACGCCGATCGGCCGGCTTTGGCATAAGTGAGCAGCGCCTTTCGGCG ATACGGCGCGGGGGGACGTG
Downstream 100 bases:
>100_bases GCCCGCGGCGGGAACGCCCGGCTCAGGCCTGCGCGGTCATCGGCTCGTCCACCACGTCGCGCGGCGCGACGCGCGGCAGG ATCATCTGGATGCGCGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MRNGLYSIHADLLDGRSGKGSGVALFRNGKILGGDAYLFYTGSYVTTGDTFKGEVTVSQHTPSPDANPLFGGQKEPVGIG VSGSWTETSAVMQGTALVGKSSQLFRATLRWLAEAD
Sequences:
>Translated_116_residues MRNGLYSIHADLLDGRSGKGSGVALFRNGKILGGDAYLFYTGSYVTTGDTFKGEVTVSQHTPSPDANPLFGGQKEPVGIG VSGSWTETSAVMQGTALVGKSSQLFRATLRWLAEAD >Mature_116_residues MRNGLYSIHADLLDGRSGKGSGVALFRNGKILGGDAYLFYTGSYVTTGDTFKGEVTVSQHTPSPDANPLFGGQKEPVGIG VSGSWTETSAVMQGTALVGKSSQLFRATLRWLAEAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12201; Mature: 12201
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNGLYSIHADLLDGRSGKGSGVALFRNGKILGGDAYLFYTGSYVTTGDTFKGEVTVSQH CCCCCEEEEEEEECCCCCCCCCEEEEECCEEECCCEEEEEECCEEECCCCCCCEEEEECC TPSPDANPLFGGQKEPVGIGVSGSWTETSAVMQGTALVGKSSQLFRATLRWLAEAD CCCCCCCCCCCCCCCCEEECCCCCCCCCHHHEECEEEECCCHHHHHHHHHHHHCCC >Mature Secondary Structure MRNGLYSIHADLLDGRSGKGSGVALFRNGKILGGDAYLFYTGSYVTTGDTFKGEVTVSQH CCCCCEEEEEEEECCCCCCCCCEEEEECCEEECCCEEEEEECCEEECCCCCCCEEEEECC TPSPDANPLFGGQKEPVGIGVSGSWTETSAVMQGTALVGKSSQLFRATLRWLAEAD CCCCCCCCCCCCCCCCEEECCCCCCCCCHHHEECEEEECCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA