Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86749445
Identifier: 86749445
GI number: 86749445
Start: 2674527
End: 2675231
Strand: Reverse
Name: 86749445
Synonym: RPB_2325
Alternate gene names: NA
Gene position: 2675231-2674527 (Counterclockwise)
Preceding gene: 86749447
Following gene: 86749442
Centisome position: 50.18
GC content: 67.66
Gene sequence:
>705_bases ATGCAGTTCGATGACGTCGTCCTCGGTCGCCGCAGCATTCGCGGATACAAGCCCGATCCCGTGCCGAAACAGTTGATCGA GGAAATCCTGACGCTGGCGATGCGCGCGCCGTCGTCGATGAACACCCAGCCGTGGAATTTCTATGTCATCACCGGCGAGC CGCTGAACCGGATCCGCGCCGGCAACACCGAGCGCAATCTGGCCGGCGTGCCGCACAGCCGCGAATTCCGCATTGGGCAG CCGTTCGCGGGCGCGCATCGCGACCGCCAGGTCGGCGTCGCCAAGCAGCTGTTCAGCGCGATGGGAATCGCGCGCGACGA CAAGGACGCGCGGCAGGACTGGGTGCTGCGCGGCTTCCGCCAGTTCGACGCACCGGTGTGCATCATCGTCACCTACGACC GCGTGCTCGACGGCAGCGACGACACGCCGTTCGATTGCGGCGCGGTGACGACCGCGCTGGTCAACGCCGCCTGGTCGCGC GGGCTCGGCTGCGTCATCAACAGCCAGGGCATCATGCAGTCGCCGGTGGTGCGCGAACACGCCGGCATCGCCGACGATCA GATCATCATGAAGGCGATCGCGCTCGGCTGGCCGGACGAGACGTTTCCCGCCAACGCGGTGGTGTCGGAGCGCAAGCCGG TCAGCGAAGCGGCGGTGTTCGTCGGGTTCGACGAAGAGCCGGCCGCGAAGCGGCAGGCGGGGTAG
Upstream 100 bases:
>100_bases GGAATGGCGTCTCGCACGGTCGTCTTGCGCGGCGCGCGCGAAACCGCGATGATCCGGTCCAACACGTGGCAGATGATAAG TCGTGGGGGAAACCAGACAA
Downstream 100 bases:
>100_bases TTCGCCCCCCGCGCGGTCATTCCGGTGCGGCCGCGCAGTCTTCAGTCTGTAGGGTGGGTTCGCGCGCAGCGCGTAACCCA CCGACTCATCTCTCCGCGCG
Product: nitroreductase
Products: NA
Alternate protein names: Nitroreductase Family Protein; Oxidoreductase; NfnB Protein; P-Nitrobenzoate Reductase; NADH Dehydrogenase; Oxidoreductase Protein; Nitroreductase Family; Nitrobenzene Nitroreductase; Oxygen-Insensitive NAD(P)H Nitroreductase; Nitrobenzoate Nitroreductase; Nitrobenzoate Reductase
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MQFDDVVLGRRSIRGYKPDPVPKQLIEEILTLAMRAPSSMNTQPWNFYVITGEPLNRIRAGNTERNLAGVPHSREFRIGQ PFAGAHRDRQVGVAKQLFSAMGIARDDKDARQDWVLRGFRQFDAPVCIIVTYDRVLDGSDDTPFDCGAVTTALVNAAWSR GLGCVINSQGIMQSPVVREHAGIADDQIIMKAIALGWPDETFPANAVVSERKPVSEAAVFVGFDEEPAAKRQAG
Sequences:
>Translated_234_residues MQFDDVVLGRRSIRGYKPDPVPKQLIEEILTLAMRAPSSMNTQPWNFYVITGEPLNRIRAGNTERNLAGVPHSREFRIGQ PFAGAHRDRQVGVAKQLFSAMGIARDDKDARQDWVLRGFRQFDAPVCIIVTYDRVLDGSDDTPFDCGAVTTALVNAAWSR GLGCVINSQGIMQSPVVREHAGIADDQIIMKAIALGWPDETFPANAVVSERKPVSEAAVFVGFDEEPAAKRQAG >Mature_234_residues MQFDDVVLGRRSIRGYKPDPVPKQLIEEILTLAMRAPSSMNTQPWNFYVITGEPLNRIRAGNTERNLAGVPHSREFRIGQ PFAGAHRDRQVGVAKQLFSAMGIARDDKDARQDWVLRGFRQFDAPVCIIVTYDRVLDGSDDTPFDCGAVTTALVNAAWSR GLGCVINSQGIMQSPVVREHAGIADDQIIMKAIALGWPDETFPANAVVSERKPVSEAAVFVGFDEEPAAKRQAG
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25737; Mature: 25737
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFDDVVLGRRSIRGYKPDPVPKQLIEEILTLAMRAPSSMNTQPWNFYVITGEPLNRIRA CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHC GNTERNLAGVPHSREFRIGQPFAGAHRDRQVGVAKQLFSAMGIARDDKDARQDWVLRGFR CCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH QFDAPVCIIVTYDRVLDGSDDTPFDCGAVTTALVNAAWSRGLGCVINSQGIMQSPVVREH HHCCCEEEEEEECHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHH AGIADDQIIMKAIALGWPDETFPANAVVSERKPVSEAAVFVGFDEEPAAKRQAG CCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCCCHHCCCC >Mature Secondary Structure MQFDDVVLGRRSIRGYKPDPVPKQLIEEILTLAMRAPSSMNTQPWNFYVITGEPLNRIRA CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHC GNTERNLAGVPHSREFRIGQPFAGAHRDRQVGVAKQLFSAMGIARDDKDARQDWVLRGFR CCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH QFDAPVCIIVTYDRVLDGSDDTPFDCGAVTTALVNAAWSRGLGCVINSQGIMQSPVVREH HHCCCEEEEEEECHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHH AGIADDQIIMKAIALGWPDETFPANAVVSERKPVSEAAVFVGFDEEPAAKRQAG CCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA