Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86749314
Identifier: 86749314
GI number: 86749314
Start: 2487319
End: 2488023
Strand: Reverse
Name: 86749314
Synonym: RPB_2194
Alternate gene names: NA
Gene position: 2488023-2487319 (Counterclockwise)
Preceding gene: 86749315
Following gene: 86749310
Centisome position: 46.67
GC content: 48.94
Gene sequence:
>705_bases ATGACCTATACTTTTCTATCCGATTTTGAAGACCGCAAAAGGCAAGTTCGCCACTATCTCGCAGTTGTGAGTAAAGCAGA ACGAGAGACGGGACTTGGCGCATCGCGCGTTCAAGACGGACGGCTTCTTACACTTAGAGCAGGAACGTTCCTCATCCTTT ATAACCTCATTGAGGCATCGACACGCGGCGCGCTCGAAACGATCCACGACAAAATCATAACAAGCGAGATTCCTTTCCAT CTACTAACCACTCCTCTAAAGAAAGAGATCATTCGCCTGTTTAAGAAAGAGGCAGATCCAGCGACACACTGCTCGATGGA TGACTTCTCTTCTGCGTTCGTAGCAATCGCTTTGGCGAACGGTATAAAACTGTCCGGGAATGTAGATGCGAAAGCAATTC GTGTAATTTGCGAATGTTATGGTTTTTCGCATCGAACCGATAGCCGCACCACGCGCGATGGAAGCGACCTGGTAACGATC AAACGAAATCGAAATGACCTCGCGCACGGGCGCAAGACGTTTGAGGAGATCGGGAGAGACCACACTGCCCCCGAACTACT TCTTCTGTCACGACGATCAATGCGATATATGGACGGAATATTGAGCAATGTCGCATACTATTTGGAACACGAGCGCTATC TGGAATTGCCACCAATCGCGCTCGACATTCAGCCTCTATCAGTGCGTTTTAGCGCAGTAACGTGA
Upstream 100 bases:
>100_bases AAAGTGACGAATTCAAAGAATGGACCACCAGTGACGCCTCGAACAACAAATCGAATCTTGTAGGACGCCTCGAATTTGTC CGTAACAAAATGCTAGGCCG
Downstream 100 bases:
>100_bases TTTAGAATGGCGTTACCGATTGCCAAGCCAAGGGCCGGCGGCACAGCATTTCCGATCAATCTGCCTATACCTCGAAAATT CACACGACTCCCAGTCGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MTYTFLSDFEDRKRQVRHYLAVVSKAERETGLGASRVQDGRLLTLRAGTFLILYNLIEASTRGALETIHDKIITSEIPFH LLTTPLKKEIIRLFKKEADPATHCSMDDFSSAFVAIALANGIKLSGNVDAKAIRVICECYGFSHRTDSRTTRDGSDLVTI KRNRNDLAHGRKTFEEIGRDHTAPELLLLSRRSMRYMDGILSNVAYYLEHERYLELPPIALDIQPLSVRFSAVT
Sequences:
>Translated_234_residues MTYTFLSDFEDRKRQVRHYLAVVSKAERETGLGASRVQDGRLLTLRAGTFLILYNLIEASTRGALETIHDKIITSEIPFH LLTTPLKKEIIRLFKKEADPATHCSMDDFSSAFVAIALANGIKLSGNVDAKAIRVICECYGFSHRTDSRTTRDGSDLVTI KRNRNDLAHGRKTFEEIGRDHTAPELLLLSRRSMRYMDGILSNVAYYLEHERYLELPPIALDIQPLSVRFSAVT >Mature_233_residues TYTFLSDFEDRKRQVRHYLAVVSKAERETGLGASRVQDGRLLTLRAGTFLILYNLIEASTRGALETIHDKIITSEIPFHL LTTPLKKEIIRLFKKEADPATHCSMDDFSSAFVAIALANGIKLSGNVDAKAIRVICECYGFSHRTDSRTTRDGSDLVTIK RNRNDLAHGRKTFEEIGRDHTAPELLLLSRRSMRYMDGILSNVAYYLEHERYLELPPIALDIQPLSVRFSAVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26503; Mature: 26372
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYTFLSDFEDRKRQVRHYLAVVSKAERETGLGASRVQDGRLLTLRAGTFLILYNLIEAS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCHHHHHHHHHHHH TRGALETIHDKIITSEIPFHLLTTPLKKEIIRLFKKEADPATHCSMDDFSSAFVAIALAN CCHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC GIKLSGNVDAKAIRVICECYGFSHRTDSRTTRDGSDLVTIKRNRNDLAHGRKTFEEIGRD CEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCC HTAPELLLLSRRSMRYMDGILSNVAYYLEHERYLELPPIALDIQPLSVRFSAVT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEEEEEEEEEEEECC >Mature Secondary Structure TYTFLSDFEDRKRQVRHYLAVVSKAERETGLGASRVQDGRLLTLRAGTFLILYNLIEAS CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCHHHHHHHHHHHH TRGALETIHDKIITSEIPFHLLTTPLKKEIIRLFKKEADPATHCSMDDFSSAFVAIALAN CCHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC GIKLSGNVDAKAIRVICECYGFSHRTDSRTTRDGSDLVTIKRNRNDLAHGRKTFEEIGRD CEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCC HTAPELLLLSRRSMRYMDGILSNVAYYLEHERYLELPPIALDIQPLSVRFSAVT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA