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The map label for this gene is yidD [C]

Identifier: 86749302

GI number: 86749302

Start: 2475275

End: 2475640

Strand: Reverse

Name: yidD [C]

Synonym: RPB_2181

Alternate gene names: 86749302

Gene position: 2475640-2475275 (Counterclockwise)

Preceding gene: 86749304

Following gene: 86749300

Centisome position: 46.43

GC content: 70.22

Gene sequence:

>366_bases
ATGCACAGCCGGCTTCCAACCCATGCCGCCGACCTGCTGCAGGCGCTCAGCCGCCTGCCGCGCAACGCCGGTCGCGGCCT
GATCTGGGTGTATCGCCACAGCTTCTCGGCGCTGGTCGGCTCGAACTGCCGGCATCTGCCGACCTGCTCGCAATATGGCG
ACGAGGCGATCGGCCGGTTCGGACTGTGGGCCGGCGGCTGGATGACGCTGGCGCGGCTCATTCGCTGCAATCCCTACGGC
ACCTCGGGGATCGACAACGTCCCCGAGACGCCGCCGCCCGGCGCGCGCTGGTACCTGCCCTGGCGCTACGCCCGCTGGCG
CGGCGTCAACGGGCCGGACTGTGGCTGCGGACATCATGATGAGTAG

Upstream 100 bases:

>100_bases
TCAACAAAGTGCGATATTTCCGTGTCTGTTGCGCATTTGCAGTAGTAGAACAGTTCCCCGCACAGGAACCCGGCAGTTCC
GCGACCGGATACGAGGCAAG

Downstream 100 bases:

>100_bases
GATGGGCAAAGTCGCGAAGCGACGTGCCCATGCGCCAGAGCAGCTCTGGCTTTGATGGAATCACCGCCGTCATCCTGAGG
TGCCCGCTGGGCCGCGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MHSRLPTHAADLLQALSRLPRNAGRGLIWVYRHSFSALVGSNCRHLPTCSQYGDEAIGRFGLWAGGWMTLARLIRCNPYG
TSGIDNVPETPPPGARWYLPWRYARWRGVNGPDCGCGHHDE

Sequences:

>Translated_121_residues
MHSRLPTHAADLLQALSRLPRNAGRGLIWVYRHSFSALVGSNCRHLPTCSQYGDEAIGRFGLWAGGWMTLARLIRCNPYG
TSGIDNVPETPPPGARWYLPWRYARWRGVNGPDCGCGHHDE
>Mature_121_residues
MHSRLPTHAADLLQALSRLPRNAGRGLIWVYRHSFSALVGSNCRHLPTCSQYGDEAIGRFGLWAGGWMTLARLIRCNPYG
TSGIDNVPETPPPGARWYLPWRYARWRGVNGPDCGCGHHDE

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=66, Percent_Identity=46.969696969697, Blast_Score=68, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2181_RHOP2 (Q2IY23)

Other databases:

- EMBL:   CP000250
- RefSeq:   YP_485798.1
- STRING:   Q2IY23
- GeneID:   3909961
- GenomeReviews:   CP000250_GR
- KEGG:   rpb:RPB_2181
- eggNOG:   COG0759
- HOGENOM:   HBG634291
- OMA:   RWRGVNA
- ProtClustDB:   PRK00041
- BioCyc:   RPAL316058:RPB_2181-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 13526; Mature: 13526

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSRLPTHAADLLQALSRLPRNAGRGLIWVYRHSFSALVGSNCRHLPTCSQYGDEAIGRF
CCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCCCCCCCCHHHHHHHHHHHH
GLWAGGWMTLARLIRCNPYGTSGIDNVPETPPPGARWYLPWRYARWRGVNGPDCGCGHHD
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCCCCC
E
C
>Mature Secondary Structure
MHSRLPTHAADLLQALSRLPRNAGRGLIWVYRHSFSALVGSNCRHLPTCSQYGDEAIGRF
CCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCCCCCCCCHHHHHHHHHHHH
GLWAGGWMTLARLIRCNPYGTSGIDNVPETPPPGARWYLPWRYARWRGVNGPDCGCGHHD
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA